RNA–Protein interactions for RNA: YOL004W

SIN3, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene SIN3, Length 4,611 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIN3YOL004W AVT6P40074 448 aa2.17□□□□□ -2.06
SIN3YOL004W KSH1Q8TGJ3 72 aa2.17□□□□□ -2.06
SIN3YOL004W TRP1P00912 224 aa2.17□□□□□ -2.06
SIN3YOL004W GSP1P32835 219 aaKnown RBP2.17□□□□□ -2.06
SIN3YOL004W GSP2P32836 220 aaKnown RBP2.17□□□□□ -2.06
SIN3YOL004W OST2P46964 130 aa2.17□□□□□ -2.06
SIN3YOL004W YGL101WP53144 215 aa2.17□□□□□ -2.06
SIN3YOL004W YDR366CP87287 132 aa2.17□□□□□ -2.06
SIN3YOL004W YMR166CQ03829 368 aa2.17□□□□□ -2.06
SIN3YOL004W DGA1Q08650 418 aa2.17□□□□□ -2.06
SIN3YOL004W RPL2AP0CX45 254 aaKnown RBP2.16□□□□□ -2.06
SIN3YOL004W RPL2BP0CX46 254 aaKnown RBP2.16□□□□□ -2.06
SIN3YOL004W RPB3P16370 318 aaKnown RBP2.16□□□□□ -2.06
SIN3YOL004W YBL010CP32788 280 aa2.16□□□□□ -2.06
SIN3YOL004W YHL049CP38722 271 aa2.16□□□□□ -2.06
SIN3YOL004W YEA4P40004 342 aa2.16□□□□□ -2.06
SIN3YOL004W CAT5P41735 233 aa2.16□□□□□ -2.06
SIN3YOL004W YGR039WP53225 103 aa2.16□□□□□ -2.06
SIN3YOL004W THI74Q04083 370 aa2.16□□□□□ -2.06
SIN3YOL004W YHP1Q04116 353 aa2.16□□□□□ -2.06
SIN3YOL004W ERP1Q05359 219 aaKnown RBP2.16□□□□□ -2.06
SIN3YOL004W TSC3Q3E790 80 aa2.16□□□□□ -2.06
SIN3YOL004W STF2P16965 84 aa2.16□□□□□ -2.06
SIN3YOL004W ERG24P32462 438 aaKnown RBP2.16□□□□□ -2.06
SIN3YOL004W SWT21P53873 357 aaPredicted RBP2.16□□□□□ -2.06
SIN3YOL004W ADD37Q03233 198 aa2.16□□□□□ -2.06
SIN3YOL004W VAM10Q08474 114 aa2.16□□□□□ -2.06
SIN3YOL004W YPR063CQ12160 140 aa2.16□□□□□ -2.06
SIN3YOL004W RPL39P04650 51 aa2.16□□□□□ -2.06
SIN3YOL004W UGX2P32772 223 aa2.16□□□□□ -2.06
SIN3YOL004W PET8P38921 284 aa2.16□□□□□ -2.06
SIN3YOL004W PEX17P40155 199 aa2.16□□□□□ -2.06
SIN3YOL004W MET31Q03081 177 aa2.16□□□□□ -2.06
SIN3YOL004W YDR102CQ03864 110 aa2.16□□□□□ -2.06
SIN3YOL004W YMR082CQ04276 118 aa2.16□□□□□ -2.06
SIN3YOL004W TRM10Q12400 293 aa2.16□□□□□ -2.06
SIN3YOL004W BOL1Q3E793 110 aa2.16□□□□□ -2.06
SIN3YOL004W SHE2P36068 246 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
SIN3YOL004W PAN3P36102 679 aaPredicted RBP2.16□□□□□ -2.06
SIN3YOL004W YGL118CP53132 145 aa2.16□□□□□ -2.06
SIN3YOL004W SDS23P53172 527 aa2.16□□□□□ -2.06
SIN3YOL004W YOR186WQ08560 144 aa2.16□□□□□ -2.06
SIN3YOL004W RPS1BP23248 255 aaKnown RBP2.15□□□□□ -2.06
SIN3YOL004W EDC2P40023 145 aaPredicted RBP2.15□□□□□ -2.06
SIN3YOL004W FLX1P40464 311 aa2.15□□□□□ -2.06
SIN3YOL004W RPL21AQ02753 160 aaKnown RBP2.15□□□□□ -2.06
SIN3YOL004W YDR115WQ04598 105 aa2.15□□□□□ -2.06
SIN3YOL004W YPL225WQ08971 146 aaKnown RBP2.15□□□□□ -2.06
SIN3YOL004W YCR023CP25351 611 aa2.15□□□□□ -2.07
SIN3YOL004W YCR090CP25654 182 aaKnown RBP2.15□□□□□ -2.07
SIN3YOL004W SVP26P38869 228 aa2.15□□□□□ -2.07
SIN3YOL004W COF1Q03048 143 aaKnown RBP2.15□□□□□ -2.07
SIN3YOL004W YML122CQ03207 126 aa2.15□□□□□ -2.07
SIN3YOL004W SMP1P38128 452 aa2.15□□□□□ -2.07
SIN3YOL004W FCY21P40039 528 aa2.15□□□□□ -2.07
SIN3YOL004W YOR292CQ08743 309 aa2.15□□□□□ -2.07
SIN3YOL004W FYV7Q12247 151 aa2.15□□□□□ -2.07
SIN3YOL004W CCA1P21269 546 aa2.14□□□□□ -2.07
SIN3YOL004W YBR137WP38276 179 aa2.14□□□□□ -2.07
SIN3YOL004W ALG9P53868 555 aaKnown RBP2.14□□□□□ -2.07
SIN3YOL004W SLM2P53955 656 aa2.14□□□□□ -2.07
SIN3YOL004W AIM11P87275 137 aa2.14□□□□□ -2.07
SIN3YOL004W CWC27Q02770 301 aa2.14□□□□□ -2.07
SIN3YOL004W PPT2Q12036 173 aa2.14□□□□□ -2.07
SIN3YOL004W MPD1Q12404 318 aaKnown RBP2.14□□□□□ -2.07
SIN3YOL004W YHR214C-EQ8TGK0 99 aa2.14□□□□□ -2.07
SIN3YOL004W TRA1P38811 3744 aa2.14□□□□□ -2.07
SIN3YOL004W RPL42AP0CX27 106 aaKnown RBP2.14□□□□□ -2.07
SIN3YOL004W RPL42BP0CX28 106 aaKnown RBP2.14□□□□□ -2.07
SIN3YOL004W YKR041WP36134 250 aa2.14□□□□□ -2.07
SIN3YOL004W ARO8P53090 500 aaKnown RBP2.14□□□□□ -2.07
SIN3YOL004W FMP48P53233 369 aa2.14□□□□□ -2.07
SIN3YOL004W LOA1Q06508 300 aa2.14□□□□□ -2.07
SIN3YOL004W TDA8Q6B2U8 126 aa2.14□□□□□ -2.07
SIN3YOL004W YPR170W-BP0C5R9 85 aa2.14□□□□□ -2.07
SIN3YOL004W HPM1P40481 377 aa2.14□□□□□ -2.07
SIN3YOL004W TDA4P47153 279 aa2.14□□□□□ -2.07
SIN3YOL004W HST4P53688 370 aa2.14□□□□□ -2.07
SIN3YOL004W SAE3P89114 91 aa2.14□□□□□ -2.07
SIN3YOL004W YOR304C-AO14468 76 aa2.14□□□□□ -2.07
SIN3YOL004W RAS2P01120 322 aaKnown RBP2.14□□□□□ -2.07
SIN3YOL004W YHL018WP38744 120 aaPredicted RBP2.14□□□□□ -2.07
SIN3YOL004W YJR111CP47148 283 aaKnown RBP2.14□□□□□ -2.07
SIN3YOL004W MPC1P53157 130 aaKnown RBP2.14□□□□□ -2.07
SIN3YOL004W MBA1P38300 278 aa2.13□□□□□ -2.07
SIN3YOL004W YOL160WQ08321 113 aa2.13□□□□□ -2.07
SIN3YOL004W YLR412C-AQ3E742 68 aa2.13□□□□□ -2.07
SIN3YOL004W CPR4P25334 318 aa2.13□□□□□ -2.07
SIN3YOL004W RNP1P32385 249 aa2.13□□□□□ -2.07
SIN3YOL004W MRX8Q05473 314 aa2.13□□□□□ -2.07
SIN3YOL004W PCC1Q3E833 88 aa2.13□□□□□ -2.07
SIN3YOL004W TEM1P38987 245 aa2.13□□□□□ -2.07
SIN3YOL004W DLS1P40366 167 aa2.13□□□□□ -2.07
SIN3YOL004W ERJ5P43613 295 aaPredicted RBP2.13□□□□□ -2.07
SIN3YOL004W FMP41P53889 259 aaKnown RBP2.13□□□□□ -2.07
SIN3YOL004W WIP1Q2V2P8 89 aa2.13□□□□□ -2.07
SIN3YOL004W ERD2P18414 219 aa2.13□□□□□ -2.07
SIN3YOL004W SLM6P38343 150 aa2.13□□□□□ -2.07
SIN3YOL004W DIG1Q03063 452 aaKnown RBP2.13□□□□□ -2.07
SIN3YOL004W YDR029WQ12111 104 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms