RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT21	YMR179W	EST3	Q03096	181 aa		0.62	□□□□□ -2.31
SPT21	YMR179W	NMA1	Q06178	401 aa	Known RBP	0.62	□□□□□ -2.31
SPT21	YMR179W	IRC19	Q07843	230 aa		0.62	□□□□□ -2.31
SPT21	YMR179W	SHB17	P36136	271 aa	Known RBP	0.62	□□□□□ -2.31
SPT21	YMR179W	YEL014C	P39999	101 aa		0.62	□□□□□ -2.31
SPT21	YMR179W	GPI2	P46961	280 aa		0.62	□□□□□ -2.31
SPT21	YMR179W	YGL230C	P53074	147 aa		0.62	□□□□□ -2.31
SPT21	YMR179W	YDR366C	P87287	132 aa		0.62	□□□□□ -2.31
SPT21	YMR179W	COF1	Q03048	143 aa	Known RBP	0.62	□□□□□ -2.31
SPT21	YMR179W	FIT1	Q04433	528 aa		0.62	□□□□□ -2.31
SPT21	YMR179W	YPR203W	Q08994	102 aa		0.62	□□□□□ -2.31
SPT21	YMR179W	CMC4	Q3E7A9	73 aa		0.62	□□□□□ -2.31
SPT21	YMR179W	YGL041W-A	P0C5N3	154 aa		0.61	□□□□□ -2.31
SPT21	YMR179W	HSP150	P32478	413 aa		0.61	□□□□□ -2.31
SPT21	YMR179W	GLC8	P41818	229 aa		0.61	□□□□□ -2.31
SPT21	YMR179W	ATP19	P81451	68 aa		0.61	□□□□□ -2.31
SPT21	YMR179W	KEI1	Q06346	221 aa		0.61	□□□□□ -2.31
SPT21	YMR179W	SCS22	Q6Q595	175 aa		0.61	□□□□□ -2.31
SPT21	YMR179W	RIB3	Q99258	208 aa		0.61	□□□□□ -2.31
SPT21	YMR179W	PRE1	P22141	198 aa	Known RBP	0.61	□□□□□ -2.31
SPT21	YMR179W	YHL037C	P38733	133 aa		0.61	□□□□□ -2.31
SPT21	YMR179W	CYC2	P38909	366 aa		0.61	□□□□□ -2.31
SPT21	YMR179W	IPT1	P38954	527 aa		0.61	□□□□□ -2.31
SPT21	YMR179W	YGR039W	P53225	103 aa		0.61	□□□□□ -2.31
SPT21	YMR179W	HHO1	P53551	258 aa		0.61	□□□□□ -2.31
SPT21	YMR179W	KIN28	P06242	306 aa		0.6	□□□□□ -2.31
SPT21	YMR179W	ACP1	P32463	125 aa		0.6	□□□□□ -2.31
SPT21	YMR179W	SUI1	P32911	108 aa	Known RBP	0.6	□□□□□ -2.31
SPT21	YMR179W	YFL051C	P43552	160 aa		0.6	□□□□□ -2.31
SPT21	YMR179W	TAF2	P23255	1407 aa		0.6	□□□□□ -2.31
SPT21	YMR179W	RPC19	P28000	142 aa	Known RBP	0.59	□□□□□ -2.31
SPT21	YMR179W	YKR070W	P36151	352 aa	Known RBP	0.59	□□□□□ -2.31
SPT21	YMR179W	YHR140W	P38842	239 aa		0.59	□□□□□ -2.31
SPT21	YMR179W	APS3	P47064	194 aa		0.59	□□□□□ -2.31
SPT21	YMR179W	YCL001W-A	P87012	153 aa		0.59	□□□□□ -2.31
SPT21	YMR179W	CSN9	Q03981	162 aa		0.59	□□□□□ -2.31
SPT21	YMR179W	YPR153W	Q06537	140 aa		0.59	□□□□□ -2.31
SPT21	YMR179W	SPC3	Q12133	184 aa		0.59	□□□□□ -2.31
SPT21	YMR179W	ACC1	Q00955	2233 aa	Known RBP	0.59	□□□□□ -2.31
SPT21	YMR179W	COX5B	P00425	151 aa		0.59	□□□□□ -2.32
SPT21	YMR179W	YBR027C	P38220	110 aa		0.59	□□□□□ -2.32
SPT21	YMR179W	VMA10	P48836	114 aa	Known RBP	0.59	□□□□□ -2.32
SPT21	YMR179W	YGL204C	P53089	101 aa		0.59	□□□□□ -2.32
SPT21	YMR179W	SPC2	Q04969	178 aa		0.59	□□□□□ -2.32
SPT21	YMR179W	GPI11	Q06636	219 aa		0.59	□□□□□ -2.32
SPT21	YMR179W	FCY1	Q12178	158 aa		0.59	□□□□□ -2.32
SPT21	YMR179W	RPS1B	P23248	255 aa	Known RBP	0.58	□□□□□ -2.32
SPT21	YMR179W	ECM31	P38122	312 aa		0.58	□□□□□ -2.32
SPT21	YMR179W	GIM4	P40005	111 aa	Known RBP	0.58	□□□□□ -2.32
SPT21	YMR179W	PHB1	P40961	287 aa		0.58	□□□□□ -2.32
SPT21	YMR179W	DCV1	P43595	202 aa		0.58	□□□□□ -2.32
SPT21	YMR179W	DIE2	P50076	525 aa		0.58	□□□□□ -2.32
SPT21	YMR179W	SPG1	P50088	95 aa		0.58	□□□□□ -2.32
SPT21	YMR179W	YGR042W	P53227	271 aa		0.58	□□□□□ -2.32
SPT21	YMR179W	YMR007W	Q03675	126 aa		0.58	□□□□□ -2.32
SPT21	YMR179W	NHP6A	P11632	93 aa	Known RBP	0.58	□□□□□ -2.32
SPT21	YMR179W	HYP2	P23301	157 aa	Known RBP	0.58	□□□□□ -2.32
SPT21	YMR179W	FYV5	P25585	152 aa		0.58	□□□□□ -2.32
SPT21	YMR179W	HUA1	P40325	198 aa		0.58	□□□□□ -2.32
SPT21	YMR179W	LSM8	P47093	109 aa	Known RBP	0.58	□□□□□ -2.32
SPT21	YMR179W	YNL019C	P53975	284 aa		0.58	□□□□□ -2.32
SPT21	YMR179W	SOM1	Q05676	74 aa		0.58	□□□□□ -2.32
SPT21	YMR179W	VAM10	Q08474	114 aa		0.58	□□□□□ -2.32
SPT21	YMR179W	YOR385W	Q08909	290 aa		0.58	□□□□□ -2.32
SPT21	YMR179W	YLR361C-A	Q3E795	98 aa		0.58	□□□□□ -2.32
SPT21	YMR179W	ATG8	P38182	117 aa	RIP-Chip data	0.57	□□□□□ -2.32	not detected
SPT21	YMR179W	TRS20	P38334	175 aa		0.57	□□□□□ -2.32
SPT21	YMR179W	HPM1	P40481	377 aa		0.57	□□□□□ -2.32
SPT21	YMR179W	EMC4	P53073	190 aa		0.57	□□□□□ -2.32
SPT21	YMR179W	RAF1	Q06891	181 aa		0.57	□□□□□ -2.32
SPT21	YMR179W	HUT1	Q12520	339 aa		0.57	□□□□□ -2.32
SPT21	YMR179W	DDP1	Q99321	188 aa	Known RBP	0.57	□□□□□ -2.32
SPT21	YMR179W	YCR050C	P25630	102 aa		0.57	□□□□□ -2.32
SPT21	YMR179W	SUA7	P29055	345 aa	Predicted RBP	0.57	□□□□□ -2.32
SPT21	YMR179W	RPL14A	P36105	138 aa	Known RBP	0.57	□□□□□ -2.32
SPT21	YMR179W	POP7	P38291	140 aa		0.57	□□□□□ -2.32
SPT21	YMR179W	RPL14B	P38754	138 aa	Known RBP	0.57	□□□□□ -2.32
SPT21	YMR179W	YAR064W	P39563	99 aa		0.57	□□□□□ -2.32
SPT21	YMR179W	YDR278C	Q05612	105 aa		0.57	□□□□□ -2.32
SPT21	YMR179W	LCL2	Q08045	131 aa		0.57	□□□□□ -2.32
SPT21	YMR179W	CCW12	Q12127	133 aa		0.57	□□□□□ -2.32
SPT21	YMR179W	MHF1	Q3E835	90 aa		0.57	□□□□□ -2.32
SPT21	YMR179W	UBR1	P19812	1950 aa		0.56	□□□□□ -2.32
SPT21	YMR179W	FMP49	A0A023PZB3	126 aa		0.56	□□□□□ -2.32
SPT21	YMR179W	RPS1A	P33442	255 aa	Known RBP	0.56	□□□□□ -2.32
SPT21	YMR179W	PRS3	P38689	320 aa	Known RBP	0.56	□□□□□ -2.32
SPT21	YMR179W	RPS20	P38701	121 aa	Known RBP	0.56	□□□□□ -2.32
SPT21	YMR179W	RPL37A	P49166	88 aa	Known RBP	0.56	□□□□□ -2.32
SPT21	YMR179W	TIM8	P57744	87 aa		0.56	□□□□□ -2.32
SPT21	YMR179W	SED1	Q01589	338 aa		0.56	□□□□□ -2.32
SPT21	YMR179W	ATP14	Q12349	124 aa		0.56	□□□□□ -2.32
SPT21	YMR179W	YNL277W-A	Q3E7Z0	62 aa		0.56	□□□□□ -2.32
SPT21	YMR179W	YAL064W	P39711	94 aa		0.55	□□□□□ -2.32
SPT21	YMR179W	TMA23	Q03525	211 aa		0.55	□□□□□ -2.32
SPT21	YMR179W	SEN15	Q04675	128 aa		0.55	□□□□□ -2.32
SPT21	YMR179W	TVP18	Q04767	167 aa		0.55	□□□□□ -2.32
SPT21	YMR179W	NAT5	Q08689	176 aa		0.55	□□□□□ -2.32
SPT21	YMR179W	MDN1	Q12019	4910 aa	Known RBP	0.55	□□□□□ -2.32
SPT21	YMR179W	RPL33A	P05744	107 aa	Known RBP	0.55	□□□□□ -2.32
SPT21	YMR179W	YGL014C-A	P0C5N1	53 aa		0.55	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms