RNA–Protein interactions for RNA: YKL146W

AVT3, Transcript of Vacuolar transporter, yeast

Gene AVT3, Length 2,079 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT3	YKL146W	YKL075C	P36083	450 aa		4.11	□□□□□ -1.75
AVT3	YKL146W	TRS20	P38334	175 aa		4.11	□□□□□ -1.75
AVT3	YKL146W	YER188W	P40103	239 aa		4.11	□□□□□ -1.75
AVT3	YKL146W	RPL15B	P54780	204 aa	Predicted RBP	4.11	□□□□□ -1.75
AVT3	YKL146W	PBP4	Q07362	185 aa	Known RBP	4.11	□□□□□ -1.75
AVT3	YKL146W	ZEO1	Q08245	113 aa		4.11	□□□□□ -1.75
AVT3	YKL146W	IRC23	Q08416	157 aa		4.11	□□□□□ -1.75
AVT3	YKL146W	CDC7	P06243	507 aa		4.1	□□□□□ -1.75
AVT3	YKL146W	HSP12	P22943	109 aa	Known RBP	4.1	□□□□□ -1.75
AVT3	YKL146W	PRS4	P38063	326 aa	Predicted RBP	4.1	□□□□□ -1.75
AVT3	YKL146W	SWT21	P53873	357 aa	Predicted RBP	4.1	□□□□□ -1.75
AVT3	YKL146W	LOA1	Q06508	300 aa		4.1	□□□□□ -1.75
AVT3	YKL146W	RPS22A	P0C0W1	130 aa	Known RBP	4.1	□□□□□ -1.75
AVT3	YKL146W	COQ3	P27680	312 aa		4.1	□□□□□ -1.75
AVT3	YKL146W	NTF2	P33331	125 aa	Known RBP	4.1	□□□□□ -1.75
AVT3	YKL146W	SFT2	P38166	215 aa		4.1	□□□□□ -1.75
AVT3	YKL146W	ATG8	P38182	117 aa	RIP-Chip data	4.1	□□□□□ -1.75	not detected
AVT3	YKL146W	VMA21	P41806	77 aa		4.1	□□□□□ -1.75
AVT3	YKL146W	BNS1	P50084	137 aa		4.1	□□□□□ -1.75
AVT3	YKL146W	YPR145C-A	Q2V2P0	78 aa		4.1	□□□□□ -1.75
AVT3	YKL146W	PET494	P07390	489 aa	Predicted RBP	4.09	□□□□□ -1.75
AVT3	YKL146W	RNA15	P25299	296 aa	Predicted RBP	4.09	□□□□□ -1.75
AVT3	YKL146W	MRPS9	P38120	278 aa		4.09	□□□□□ -1.75
AVT3	YKL146W	MOG1	P47123	218 aa		4.09	□□□□□ -1.75
AVT3	YKL146W	CPD1	P53314	239 aa		4.09	□□□□□ -1.75
AVT3	YKL146W	HHO1	P53551	258 aa		4.09	□□□□□ -1.75
AVT3	YKL146W	LDS2	Q08218	356 aa		4.09	□□□□□ -1.75
AVT3	YKL146W	YER175W-A	Q8TGU4	54 aa		4.09	□□□□□ -1.75
AVT3	YKL146W	CCW14	O13547	238 aa		4.09	□□□□□ -1.76
AVT3	YKL146W	POP5	P28005	173 aa		4.09	□□□□□ -1.76
AVT3	YKL146W	CYB5	P40312	120 aa		4.09	□□□□□ -1.76
AVT3	YKL146W	YDL186W	P48568	277 aa		4.09	□□□□□ -1.76
AVT3	YKL146W	HST4	P53688	370 aa		4.09	□□□□□ -1.76
AVT3	YKL146W	DAD3	P69850	94 aa		4.09	□□□□□ -1.76
AVT3	YKL146W	SPG4	Q04438	115 aa		4.09	□□□□□ -1.76
AVT3	YKL146W	IZH3	Q07959	543 aa		4.09	□□□□□ -1.76
AVT3	YKL146W	AYT1	Q12226	474 aa		4.09	□□□□□ -1.76
AVT3	YKL146W	RPB3	P16370	318 aa	Known RBP	4.08	□□□□□ -1.76
AVT3	YKL146W	INO2	P26798	304 aa		4.08	□□□□□ -1.76
AVT3	YKL146W	LSM2	P38203	95 aa	Known RBP	4.08	□□□□□ -1.76
AVT3	YKL146W	DIA1	P54005	336 aa		4.08	□□□□□ -1.76
AVT3	YKL146W	YHR213W	P0CI67	198 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	TIR2	P33890	251 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	PHD1	P36093	366 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	YHR173C	P38864	112 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	YIL163C	P40448	117 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	NSE4	P43124	402 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	HIT1	P46973	164 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	MGA1	P53050	456 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	YGR219W	P53307	113 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	CAB4	P53332	305 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	YML122C	Q03207	126 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
AVT3	YKL146W	FIT2	Q08906	153 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	CYC3	P06182	269 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	HSP10	P38910	106 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	MBB1	P39534	108 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	SNU13	P39990	126 aa	Known RBP	4.07	□□□□□ -1.76
AVT3	YKL146W	PAU15	P40585	124 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	GPI2	P46961	280 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	VPS55	P47111	140 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	DAN1	P47178	298 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	MRX11	Q03079	207 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	HOR7	Q05827	59 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	NAT3	Q06504	195 aa		4.07	□□□□□ -1.76
AVT3	YKL146W	YOR097C	Q12274	175 aa	Predicted RBP	4.07	□□□□□ -1.76
AVT3	YKL146W	FMP49	A0A023PZB3	126 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	DDI2	P0CH63	225 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	DDI3	P0CH64	225 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	YCR041W	P37265	110 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	SDH4	P37298	181 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	YPT10	P38146	199 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	ICS2	P38284	255 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	MIC12	P38341	106 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	GTT1	P40582	234 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	TOS8	P53147	276 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	YMR181C	Q03231	154 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	TIM18	Q08749	192 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	YLR118C	Q12354	227 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	SNU23	Q12368	194 aa	Predicted RBP	4.06	□□□□□ -1.76
AVT3	YKL146W	RPL18A	P0CX49	186 aa	Known RBP	4.06	□□□□□ -1.76
AVT3	YKL146W	RPL18B	P0CX50	186 aa	Known RBP	4.06	□□□□□ -1.76
AVT3	YKL146W	POF1	P25576	258 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	SUR2	P38992	349 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	POR2	P40478	281 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	YJL027C	P47063	138 aa	Predicted RBP	4.06	□□□□□ -1.76
AVT3	YKL146W	UBC7	Q02159	165 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	IZH1	Q03419	316 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	SMT3	Q12306	101 aa	Known RBP	4.06	□□□□□ -1.76
AVT3	YKL146W	DCN1	Q12395	269 aa		4.06	□□□□□ -1.76
AVT3	YKL146W	ADH2	P00331	348 aa	Known RBP	4.05	□□□□□ -1.76
AVT3	YKL146W	MRS1	P07266	363 aa		4.05	□□□□□ -1.76
AVT3	YKL146W	NHP6A	P11632	93 aa	Known RBP	4.05	□□□□□ -1.76
AVT3	YKL146W	IMP2	P46972	177 aa		4.05	□□□□□ -1.76
AVT3	YKL146W	YGR026W	P53217	278 aa		4.05	□□□□□ -1.76
AVT3	YKL146W	TOM7	P53507	60 aa		4.05	□□□□□ -1.76
AVT3	YKL146W	RAV2	Q03956	351 aa		4.05	□□□□□ -1.76
AVT3	YKL146W	HUA1	P40325	198 aa		4.04	□□□□□ -1.76
AVT3	YKL146W	DUG3	P53871	357 aa		4.04	□□□□□ -1.76
AVT3	YKL146W	FYV6	P53913	173 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms