RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP120YKL057C SPT14P32363 452 aa0.64□□□□□ -2.31
NUP120YKL057C VMA22P38784 181 aa0.64□□□□□ -2.31
NUP120YKL057C THG1P53215 237 aaKnown RBP0.64□□□□□ -2.31
NUP120YKL057C YAE1P47118 141 aaPredicted RBP0.64□□□□□ -2.31
NUP120YKL057C DAD4P69851 72 aa0.64□□□□□ -2.31
NUP120YKL057C COA6Q3E846 104 aa0.64□□□□□ -2.31
NUP120YKL057C MGR2Q02889 113 aa0.64□□□□□ -2.31
NUP120YKL057C RIB3Q99258 208 aa0.64□□□□□ -2.31
NUP120YKL057C CSH1P38287 376 aa0.63□□□□□ -2.31
NUP120YKL057C CPR5P35176 225 aa0.63□□□□□ -2.31
NUP120YKL057C YHL042WP38729 150 aa0.63□□□□□ -2.31
NUP120YKL057C DLS1P40366 167 aa0.63□□□□□ -2.31
NUP120YKL057C APQ12P40532 138 aa0.63□□□□□ -2.31
NUP120YKL057C YDR278CQ05612 105 aa0.63□□□□□ -2.31
NUP120YKL057C TY1B-HO13535 1793 aa0.62□□□□□ -2.31
NUP120YKL057C UBR1P19812 1950 aa0.62□□□□□ -2.31
NUP120YKL057C YER121WP40076 114 aa0.62□□□□□ -2.31
NUP120YKL057C PKR1Q03880 122 aaKnown RBP0.62□□□□□ -2.31
NUP120YKL057C RDI1Q12434 202 aa0.62□□□□□ -2.31
NUP120YKL057C TAR1Q8TGM6 124 aa0.62□□□□□ -2.31
NUP120YKL057C TRM732Q03496 1420 aa0.61□□□□□ -2.31
NUP120YKL057C SLM6P38343 150 aa0.61□□□□□ -2.31
NUP120YKL057C EMC4P53073 190 aa0.61□□□□□ -2.31
NUP120YKL057C MDN1Q12019 4910 aaKnown RBP0.61□□□□□ -2.31
NUP120YKL057C NMT1P14743 455 aa0.61□□□□□ -2.31
NUP120YKL057C MRPL44P19956 98 aa0.61□□□□□ -2.31
NUP120YKL057C YEL008WP40001 126 aa0.61□□□□□ -2.31
NUP120YKL057C ICS3P47034 131 aa0.61□□□□□ -2.31
NUP120YKL057C YOR093CQ12275 1648 aa0.61□□□□□ -2.31
NUP120YKL057C YCR001WP25347 104 aa0.6□□□□□ -2.31
NUP120YKL057C YRA2P36036 203 aaKnown RBP RIP-Chip data0.6□□□□□ -2.31not detected
NUP120YKL057C IPT1P38954 527 aa0.6□□□□□ -2.31
NUP120YKL057C YMR252CQ04814 134 aa0.6□□□□□ -2.31
NUP120YKL057C YHR213W-BQ8TGK1 99 aa0.6□□□□□ -2.31
NUP120YKL057C GIM4P40005 111 aaKnown RBP0.6□□□□□ -2.31
NUP120YKL057C EFM5P53200 248 aaKnown RBP0.6□□□□□ -2.31
NUP120YKL057C TY4B-JP47024 1803 aa0.6□□□□□ -2.31
NUP120YKL057C RPS22AP0C0W1 130 aaKnown RBP0.6□□□□□ -2.31
NUP120YKL057C YJL197C-AP0C5P0 93 aa0.6□□□□□ -2.31
NUP120YKL057C PHO13P19881 312 aa0.6□□□□□ -2.31
NUP120YKL057C FYV4P38783 130 aaPredicted RBP0.6□□□□□ -2.31
NUP120YKL057C IRC19Q07843 230 aa0.6□□□□□ -2.31
NUP120YKL057C RPS22BQ3E7Y3 130 aaKnown RBP0.6□□□□□ -2.31
NUP120YKL057C YKR070WP36151 352 aaKnown RBP0.59□□□□□ -2.31
NUP120YKL057C LSM1P47017 172 aaKnown RBP0.59□□□□□ -2.31
NUP120YKL057C YRF1-6P53819 1859 aa0.59□□□□□ -2.31
NUP120YKL057C ETR1P38071 380 aa0.59□□□□□ -2.32
NUP120YKL057C SPC3Q12133 184 aa0.59□□□□□ -2.32
NUP120YKL057C NSL1Q12143 216 aa0.59□□□□□ -2.32
NUP120YKL057C PDR15Q04182 1529 aaKnown RBP0.59□□□□□ -2.32
NUP120YKL057C YFL065CP43539 102 aa0.58□□□□□ -2.32
NUP120YKL057C FIP1P45976 327 aa0.58□□□□□ -2.32
NUP120YKL057C ATG10Q07879 167 aa0.58□□□□□ -2.32
NUP120YKL057C YHL037CP38733 133 aa0.58□□□□□ -2.32
NUP120YKL057C YNL019CP53975 284 aa0.58□□□□□ -2.32
NUP120YKL057C HSK3P69852 69 aa0.58□□□□□ -2.32
NUP120YKL057C RFU1Q08003 200 aa0.58□□□□□ -2.32
NUP120YKL057C YBR027CP38220 110 aa0.58□□□□□ -2.32
NUP120YKL057C YPR114WQ06107 315 aa0.58□□□□□ -2.32
NUP120YKL057C YDR366CP87287 132 aa0.57□□□□□ -2.32
NUP120YKL057C PHO85P17157 305 aa0.57□□□□□ -2.32
NUP120YKL057C MAK31P23059 88 aa0.57□□□□□ -2.32
NUP120YKL057C ORM1P53224 222 aa0.56□□□□□ -2.32
NUP120YKL057C MRPL24P36525 258 aaPredicted RBP0.56□□□□□ -2.32
NUP120YKL057C BRP1P53194 125 aa0.56□□□□□ -2.32
NUP120YKL057C YDC1Q02896 317 aa0.56□□□□□ -2.32
NUP120YKL057C GPI11Q06636 219 aa0.56□□□□□ -2.32
NUP120YKL057C CUP1-1P0CX80 61 aa0.55□□□□□ -2.32
NUP120YKL057C CUP1-2P0CX81 61 aa0.55□□□□□ -2.32
NUP120YKL057C LTE1P07866 1435 aa0.55□□□□□ -2.32
NUP120YKL057C PAC10P48363 199 aa0.55□□□□□ -2.32
NUP120YKL057C GSC2P40989 1895 aa0.55□□□□□ -2.32
NUP120YKL057C UBI4P0CG63 381 aaKnown RBP0.55□□□□□ -2.32
NUP120YKL057C YJL218WP40892 196 aaKnown RBP0.55□□□□□ -2.32
NUP120YKL057C PHB1P40961 287 aa0.55□□□□□ -2.32
NUP120YKL057C DIE2P50076 525 aa0.55□□□□□ -2.32
NUP120YKL057C YGL204CP53089 101 aa0.55□□□□□ -2.32
NUP120YKL057C URB1P34241 1764 aaKnown RBP0.54□□□□□ -2.32
NUP120YKL057C LST8P41318 303 aa0.54□□□□□ -2.32
NUP120YKL057C TMA23Q03525 211 aa0.54□□□□□ -2.32
NUP120YKL057C SOM1Q05676 74 aa0.54□□□□□ -2.32
NUP120YKL057C YDL241WQ07738 123 aa0.54□□□□□ -2.32
NUP120YKL057C RPL33AP05744 107 aaKnown RBP0.53□□□□□ -2.32
NUP120YKL057C YGR201CP42936 225 aa0.53□□□□□ -2.32
NUP120YKL057C PST2Q12335 198 aaKnown RBP0.53□□□□□ -2.32
NUP120YKL057C YOR381W-AQ3E804 55 aa0.53□□□□□ -2.32
NUP120YKL057C IPI1P38803 334 aaPredicted RBP0.53□□□□□ -2.32
NUP120YKL057C SDH7Q04401 133 aa0.53□□□□□ -2.32
NUP120YKL057C YRF1-1P0CX20 1796 aa0.53□□□□□ -2.32
NUP120YKL057C YRF1-5P0CX21 1796 aa0.53□□□□□ -2.32
NUP120YKL057C YRF1-8P0CX22 1796 aa0.53□□□□□ -2.32
NUP120YKL057C ATP14Q12349 124 aa0.53□□□□□ -2.33
NUP120YKL057C YPT31P38555 223 aaKnown RBP0.52□□□□□ -2.33
NUP120YKL057C YGL230CP53074 147 aa0.52□□□□□ -2.33
NUP120YKL057C YGR039WP53225 103 aa0.52□□□□□ -2.33
NUP120YKL057C Q0144Q9ZZW2 109 aa0.52□□□□□ -2.33
NUP120YKL057C YBR242WP38331 238 aa0.51□□□□□ -2.33
NUP120YKL057C YER181CP40097 107 aa0.51□□□□□ -2.33
NUP120YKL057C YLR296WQ05898 108 aa0.51□□□□□ -2.33
NUP120YKL057C CCW12Q12127 133 aa0.51□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms