RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W MIG1P27705 504 aa3.07□□□□□ -1.92
TFA1YKL028W GAA1P39012 614 aa3.07□□□□□ -1.92
TFA1YKL028W FLX1P40464 311 aa3.07□□□□□ -1.92
TFA1YKL028W MOB1P40484 314 aa3.07□□□□□ -1.92
TFA1YKL028W TIR3P40552 269 aa3.07□□□□□ -1.92
TFA1YKL028W YIR035CP40579 254 aa3.07□□□□□ -1.92
TFA1YKL028W LSM8P47093 109 aaKnown RBP3.07□□□□□ -1.92
TFA1YKL028W DML1Q03652 475 aa3.07□□□□□ -1.92
TFA1YKL028W YOR015WQ12169 119 aa3.07□□□□□ -1.92
TFA1YKL028W YAR029WP39549 74 aa3.06□□□□□ -1.92
TFA1YKL028W YAL064WP39711 94 aa3.06□□□□□ -1.92
TFA1YKL028W CIS3P47001 227 aa3.06□□□□□ -1.92
TFA1YKL028W YJL027CP47063 138 aaPredicted RBP3.06□□□□□ -1.92
TFA1YKL028W THG1P53215 237 aaKnown RBP3.06□□□□□ -1.92
TFA1YKL028W OCA6Q12454 224 aa3.06□□□□□ -1.92
TFA1YKL028W SSN2P38931 1420 aa3.06□□□□□ -1.92
TFA1YKL028W FAS1P07149 2051 aaKnown RBP3.06□□□□□ -1.92
TFA1YKL028W YBR209WP38311 105 aa3.05□□□□□ -1.92
TFA1YKL028W DAD3P69850 94 aa3.05□□□□□ -1.92
TFA1YKL028W ATP19P81451 68 aa3.05□□□□□ -1.92
TFA1YKL028W PIR1Q03178 341 aa3.05□□□□□ -1.92
TFA1YKL028W YMR252CQ04814 134 aa3.05□□□□□ -1.92
TFA1YKL028W YPR013CQ12145 317 aa3.05□□□□□ -1.92
TFA1YKL028W RTR2Q12378 196 aa3.05□□□□□ -1.92
TFA1YKL028W INO4P13902 151 aa3.04□□□□□ -1.92
TFA1YKL028W ERV15P38312 142 aa3.04□□□□□ -1.92
TFA1YKL028W YHL042WP38729 150 aa3.04□□□□□ -1.92
TFA1YKL028W UPS3Q04006 179 aa3.04□□□□□ -1.92
TFA1YKL028W CUE4Q04201 117 aaPredicted RBP3.04□□□□□ -1.92
TFA1YKL028W ATG41Q12048 136 aa3.04□□□□□ -1.92
TFA1YKL028W YOR097CQ12274 175 aaPredicted RBP3.04□□□□□ -1.92
TFA1YKL028W KRE1P17260 313 aa3.03□□□□□ -1.92
TFA1YKL028W SDH4P37298 181 aa3.03□□□□□ -1.92
TFA1YKL028W NSE4P43124 402 aa3.03□□□□□ -1.92
TFA1YKL028W MPC1P53157 130 aaKnown RBP3.03□□□□□ -1.92
TFA1YKL028W YML079WQ03629 201 aa3.03□□□□□ -1.92
TFA1YKL028W CLB6P32943 380 aa3.02□□□□□ -1.93
TFA1YKL028W TMA19P35691 167 aaKnown RBP3.02□□□□□ -1.93
TFA1YKL028W YJR146WP47174 117 aa3.02□□□□□ -1.93
TFA1YKL028W DIE2P50076 525 aa3.02□□□□□ -1.93
TFA1YKL028W UPS1Q05776 175 aa3.02□□□□□ -1.93
TFA1YKL028W YDL241WQ07738 123 aa3.02□□□□□ -1.93
TFA1YKL028W YOR385WQ08909 290 aa3.02□□□□□ -1.93
TFA1YKL028W YOR376W-AQ3E805 51 aa3.02□□□□□ -1.93
TFA1YKL028W HAP2P06774 265 aa3.02□□□□□ -1.93
TFA1YKL028W PAM16P42949 149 aa3.02□□□□□ -1.93
TFA1YKL028W YAE1P47118 141 aaPredicted RBP3.02□□□□□ -1.93
TFA1YKL028W BAT2P47176 376 aaKnown RBP3.02□□□□□ -1.93
TFA1YKL028W MZM1Q03429 123 aaPredicted RBP3.02□□□□□ -1.93
TFA1YKL028W YHP1Q04116 353 aa3.02□□□□□ -1.93
TFA1YKL028W IRC19Q07843 230 aa3.02□□□□□ -1.93
TFA1YKL028W RAD28Q12021 506 aa3.02□□□□□ -1.93
TFA1YKL028W ADE6P38972 1358 aaKnown RBP3.01□□□□□ -1.93
TFA1YKL028W PEX4P29340 183 aa3.01□□□□□ -1.93
TFA1YKL028W SRL3P36167 246 aa3.01□□□□□ -1.93
TFA1YKL028W YBR090CP38253 122 aa3.01□□□□□ -1.93
TFA1YKL028W SVP26P38869 228 aa3.01□□□□□ -1.93
TFA1YKL028W YEL067CP39978 195 aa3.01□□□□□ -1.93
TFA1YKL028W GNA1P43577 159 aaPredicted RBP3.01□□□□□ -1.93
TFA1YKL028W SOM1Q05676 74 aa3.01□□□□□ -1.93
TFA1YKL028W SEC11P15367 167 aa3□□□□□ -1.93
TFA1YKL028W MAK31P23059 88 aa3□□□□□ -1.93
TFA1YKL028W PHO88P38264 188 aaPredicted RBP3□□□□□ -1.93
TFA1YKL028W ERG25P53045 309 aa3□□□□□ -1.93
TFA1YKL028W DAD4P69851 72 aa3□□□□□ -1.93
TFA1YKL028W RCE1Q03530 315 aa3□□□□□ -1.93
TFA1YKL028W YPR195CQ06594 109 aa3□□□□□ -1.93
TFA1YKL028W YCR099CP25657 155 aa2.99□□□□□ -1.93
TFA1YKL028W AGA2P32781 87 aa2.99□□□□□ -1.93
TFA1YKL028W QCR10P37299 77 aa2.99□□□□□ -1.93
TFA1YKL028W YGR269WP40326 108 aa2.99□□□□□ -1.93
TFA1YKL028W KNH1P50112 268 aa2.99□□□□□ -1.93
TFA1YKL028W POP3P53833 195 aaPredicted RBP2.99□□□□□ -1.93
TFA1YKL028W MSB2P32334 1306 aa2.99□□□□□ -1.93
TFA1YKL028W UBC5P15732 148 aa2.98□□□□□ -1.93
TFA1YKL028W HYP2P23301 157 aaKnown RBP2.98□□□□□ -1.93
TFA1YKL028W YHL018WP38744 120 aaPredicted RBP2.98□□□□□ -1.93
TFA1YKL028W YCL001W-AP87012 153 aa2.98□□□□□ -1.93
TFA1YKL028W NMA1Q06178 401 aaKnown RBP2.98□□□□□ -1.93
TFA1YKL028W KEI1Q06346 221 aa2.98□□□□□ -1.93
TFA1YKL028W YPR174CQ06616 221 aaPredicted RBP2.98□□□□□ -1.93
TFA1YKL028W RAF1Q06891 181 aa2.98□□□□□ -1.93
TFA1YKL028W KRE5P22023 1365 aa2.98□□□□□ -1.93
TFA1YKL028W FYV5P25585 152 aa2.97□□□□□ -1.93
TFA1YKL028W CCS1P40202 249 aaKnown RBP2.97□□□□□ -1.93
TFA1YKL028W RDS3Q06835 107 aaPredicted RBP2.97□□□□□ -1.93
TFA1YKL028W GTT2Q12390 233 aa2.97□□□□□ -1.93
TFA1YKL028W COX5BP00425 151 aa2.96□□□□□ -1.94
TFA1YKL028W COX8P04039 78 aa2.96□□□□□ -1.94
TFA1YKL028W SEC59P20048 519 aa2.96□□□□□ -1.94
TFA1YKL028W YEA6P39953 335 aa2.96□□□□□ -1.94
TFA1YKL028W YGR164WP53291 111 aa2.96□□□□□ -1.94
TFA1YKL028W VPS68Q12016 184 aa2.96□□□□□ -1.94
TFA1YKL028W MET5P47169 1442 aa2.95□□□□□ -1.94
TFA1YKL028W YGL041W-AP0C5N3 154 aa2.95□□□□□ -1.94
TFA1YKL028W YKL044WP36092 106 aa2.95□□□□□ -1.94
TFA1YKL028W MRPL15P36523 253 aa2.95□□□□□ -1.94
TFA1YKL028W SNF11P38956 169 aa2.95□□□□□ -1.94
TFA1YKL028W TDA2P40045 126 aa2.95□□□□□ -1.94
TFA1YKL028W YFR035CP43608 114 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms