RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C YLL066W-AP0CY00 160 aa1.73□□□□□ -2.13
UFD4YKL010C YLL067W-AP0CY01 160 aa1.73□□□□□ -2.13
UFD4YKL010C CUE1P38428 203 aa1.73□□□□□ -2.13
UFD4YKL010C LST8P41318 303 aa1.73□□□□□ -2.13
UFD4YKL010C LPP1Q04396 274 aa1.73□□□□□ -2.13
UFD4YKL010C YOR105WQ08504 108 aa1.73□□□□□ -2.13
UFD4YKL010C YPL162CQ12042 273 aa1.73□□□□□ -2.13
UFD4YKL010C SWT1Q12104 458 aa1.73□□□□□ -2.13
UFD4YKL010C YOR029WQ12243 111 aa1.73□□□□□ -2.13
UFD4YKL010C POM34Q12445 299 aa1.73□□□□□ -2.13
UFD4YKL010C SEC11P15367 167 aa1.72□□□□□ -2.13
UFD4YKL010C MRPL20P22354 195 aaPredicted RBP1.72□□□□□ -2.13
UFD4YKL010C GSP1P32835 219 aaKnown RBP1.72□□□□□ -2.13
UFD4YKL010C GSP2P32836 220 aaKnown RBP1.72□□□□□ -2.13
UFD4YKL010C YNK1P36010 153 aaKnown RBP1.72□□□□□ -2.13
UFD4YKL010C RPB11P38902 120 aa1.72□□□□□ -2.13
UFD4YKL010C RPL9BP51401 191 aaKnown RBP1.72□□□□□ -2.13
UFD4YKL010C DYN2Q02647 92 aa1.72□□□□□ -2.13
UFD4YKL010C YML122CQ03207 126 aa1.72□□□□□ -2.13
UFD4YKL010C YLR112WQ12130 139 aa1.72□□□□□ -2.13
UFD4YKL010C SME1Q12330 94 aaPredicted RBP1.72□□□□□ -2.13
UFD4YKL010C YIL134C-AQ45U18 67 aa1.72□□□□□ -2.13
UFD4YKL010C BRR2P32639 2163 aaKnown RBP1.72□□□□□ -2.13
UFD4YKL010C YPS1P32329 569 aa1.72□□□□□ -2.13
UFD4YKL010C TCA17P32613 152 aa1.72□□□□□ -2.13
UFD4YKL010C YPT10P38146 199 aa1.72□□□□□ -2.13
UFD4YKL010C DER1P38307 211 aa1.72□□□□□ -2.13
UFD4YKL010C YJL016WP47072 561 aa1.72□□□□□ -2.13
UFD4YKL010C YDL183CP48569 320 aa1.72□□□□□ -2.13
UFD4YKL010C SED1Q01589 338 aa1.72□□□□□ -2.13
UFD4YKL010C FCF1Q05498 189 aaPredicted RBP1.72□□□□□ -2.13
UFD4YKL010C ARR3Q06598 404 aa1.72□□□□□ -2.13
UFD4YKL010C MSL5Q12186 476 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
UFD4YKL010C AYT1Q12226 474 aa1.72□□□□□ -2.13
UFD4YKL010C MRS3P10566 314 aa1.72□□□□□ -2.13
UFD4YKL010C URA5P13298 226 aaKnown RBP1.72□□□□□ -2.13
UFD4YKL010C DOG2P38773 246 aa1.72□□□□□ -2.13
UFD4YKL010C DOG1P38774 246 aa1.72□□□□□ -2.13
UFD4YKL010C COX16P47081 118 aa1.72□□□□□ -2.13
UFD4YKL010C YJR015WP47090 510 aa1.72□□□□□ -2.13
UFD4YKL010C YJR096WP47137 282 aa1.72□□□□□ -2.13
UFD4YKL010C ERV25P54837 211 aaKnown RBP1.72□□□□□ -2.13
UFD4YKL010C CCW12Q12127 133 aa1.72□□□□□ -2.13
UFD4YKL010C MDM10P18409 493 aa1.72□□□□□ -2.13
UFD4YKL010C DAL80P26343 269 aa1.72□□□□□ -2.13
UFD4YKL010C MIG1P27705 504 aa1.72□□□□□ -2.13
UFD4YKL010C MRP49P32388 137 aa1.72□□□□□ -2.13
UFD4YKL010C YKL044WP36092 106 aa1.72□□□□□ -2.13
UFD4YKL010C SGN1P40561 250 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
UFD4YKL010C YGL118CP53132 145 aa1.72□□□□□ -2.13
UFD4YKL010C UPS3Q04006 179 aa1.72□□□□□ -2.13
UFD4YKL010C RFM1Q12192 310 aa1.72□□□□□ -2.13
UFD4YKL010C FOL3Q12676 427 aaPredicted RBP1.72□□□□□ -2.13
UFD4YKL010C FUN14P18411 198 aa1.71□□□□□ -2.14
UFD4YKL010C YCR023CP25351 611 aa1.71□□□□□ -2.14
UFD4YKL010C IES6P32617 166 aa1.71□□□□□ -2.14
UFD4YKL010C CMC1P36064 111 aa1.71□□□□□ -2.14
UFD4YKL010C SFT2P38166 215 aa1.71□□□□□ -2.14
UFD4YKL010C RTS2P40962 232 aa1.71□□□□□ -2.14
UFD4YKL010C BET5Q03630 159 aa1.71□□□□□ -2.14
UFD4YKL010C NAT3Q06504 195 aa1.71□□□□□ -2.14
UFD4YKL010C POM33Q12164 279 aa1.71□□□□□ -2.14
UFD4YKL010C TPT1Q12272 230 aaKnown RBP1.71□□□□□ -2.14
UFD4YKL010C ELO2P25358 347 aa1.71□□□□□ -2.14
UFD4YKL010C YIL077CP40508 320 aa1.71□□□□□ -2.14
UFD4YKL010C SWT21P53873 357 aaPredicted RBP1.71□□□□□ -2.14
UFD4YKL010C SKO1Q02100 647 aa1.71□□□□□ -2.14
UFD4YKL010C MRP51Q02950 344 aa1.71□□□□□ -2.14
UFD4YKL010C SEN15Q04675 128 aa1.71□□□□□ -2.14
UFD4YKL010C LDS2Q08218 356 aa1.71□□□□□ -2.14
UFD4YKL010C FSF1Q12029 327 aaKnown RBP1.71□□□□□ -2.14
UFD4YKL010C POL2P21951 2222 aaKnown RBP1.71□□□□□ -2.14
UFD4YKL010C MBF1O14467 151 aaKnown RBP1.71□□□□□ -2.14
UFD4YKL010C PFY1P07274 126 aa1.71□□□□□ -2.14
UFD4YKL010C GPP2P40106 250 aaKnown RBP1.71□□□□□ -2.14
UFD4YKL010C TOS6P48560 102 aa1.71□□□□□ -2.14
UFD4YKL010C SUR7P54003 302 aa1.71□□□□□ -2.14
UFD4YKL010C DAD3P69850 94 aa1.71□□□□□ -2.14
UFD4YKL010C SAE3P89114 91 aa1.71□□□□□ -2.14
UFD4YKL010C RAV2Q03956 351 aa1.71□□□□□ -2.14
UFD4YKL010C TSA2Q04120 196 aa1.71□□□□□ -2.14
UFD4YKL010C TIM18Q08749 192 aa1.71□□□□□ -2.14
UFD4YKL010C GCN1P33892 2672 aaKnown RBP1.71□□□□□ -2.14
UFD4YKL010C HFA1P32874 2273 aa1.71□□□□□ -2.14
UFD4YKL010C FRS1P15624 595 aaKnown RBP1.7□□□□□ -2.14
UFD4YKL010C FEN2P25621 512 aaKnown RBP1.7□□□□□ -2.14
UFD4YKL010C MIA40P36046 403 aa1.7□□□□□ -2.14
UFD4YKL010C YER134CP40081 178 aa1.7□□□□□ -2.14
UFD4YKL010C PCL7P40186 285 aa1.7□□□□□ -2.14
UFD4YKL010C PRE5P40302 234 aaKnown RBP1.7□□□□□ -2.14
UFD4YKL010C PIR5P46999 287 aa1.7□□□□□ -2.14
UFD4YKL010C PBP4Q07362 185 aaKnown RBP1.7□□□□□ -2.14
UFD4YKL010C IZH3Q07959 543 aa1.7□□□□□ -2.14
UFD4YKL010C SMT3Q12306 101 aaKnown RBP1.7□□□□□ -2.14
UFD4YKL010C GEP5Q12393 293 aa1.7□□□□□ -2.14
UFD4YKL010C NOP1P15646 327 aaKnown RBP1.7□□□□□ -2.14
UFD4YKL010C FZF1P32805 299 aa1.7□□□□□ -2.14
UFD4YKL010C WSC2P53832 503 aa1.7□□□□□ -2.14
UFD4YKL010C SDH7Q04401 133 aa1.7□□□□□ -2.14
UFD4YKL010C YDL218WQ07629 317 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 96.1 ms