RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C YKR045CP36138 183 aa2.53□□□□□ -2
SPB4YFL002C HPM1P40481 377 aa2.53□□□□□ -2
SPB4YFL002C ALB1P47019 175 aaPredicted RBP2.53□□□□□ -2
SPB4YFL002C YHR007C-AQ07074 71 aa2.53□□□□□ -2
SPB4YFL002C DUR1,2P32528 1835 aaKnown RBP2.53□□□□□ -2
SPB4YFL002C SPA2P23201 1466 aaKnown RBP2.52□□□□□ -2.01
SPB4YFL002C YGR269WP40326 108 aa2.52□□□□□ -2.01
SPB4YFL002C SFT1P43682 97 aa2.52□□□□□ -2.01
SPB4YFL002C EMC4P53073 190 aa2.52□□□□□ -2.01
SPB4YFL002C ATP19P81451 68 aa2.52□□□□□ -2.01
SPB4YFL002C BOL1Q3E793 110 aa2.52□□□□□ -2.01
SPB4YFL002C YLR422WQ06409 1932 aa2.52□□□□□ -2.01
SPB4YFL002C FAS1P07149 2051 aaKnown RBP2.52□□□□□ -2.01
SPB4YFL002C RPS1BP23248 255 aaKnown RBP2.52□□□□□ -2.01
SPB4YFL002C TVP18Q04767 167 aa2.52□□□□□ -2.01
SPB4YFL002C STF2P16965 84 aa2.51□□□□□ -2.01
SPB4YFL002C UGX2P32772 223 aa2.51□□□□□ -2.01
SPB4YFL002C NRG2P38082 220 aa2.51□□□□□ -2.01
SPB4YFL002C PEP8P40335 379 aa2.51□□□□□ -2.01
SPB4YFL002C SPG1P50088 95 aa2.51□□□□□ -2.01
SPB4YFL002C ELC1Q03071 99 aa2.51□□□□□ -2.01
SPB4YFL002C YMR030W-AQ3E760 96 aa2.51□□□□□ -2.01
SPB4YFL002C YLR099W-AQ3E798 87 aa2.51□□□□□ -2.01
SPB4YFL002C FLO9P39712 1322 aa2.5□□□□□ -2.01
SPB4YFL002C ADE6P38972 1358 aaKnown RBP2.5□□□□□ -2.01
SPB4YFL002C YKR070WP36151 352 aaKnown RBP2.49□□□□□ -2.01
SPB4YFL002C LSM8P47093 109 aaKnown RBP2.49□□□□□ -2.01
SPB4YFL002C APS2Q00381 147 aa2.49□□□□□ -2.01
SPB4YFL002C IRC19Q07843 230 aa2.49□□□□□ -2.01
SPB4YFL002C YDL157CQ12082 118 aa2.49□□□□□ -2.01
SPB4YFL002C YBL010CP32788 280 aa2.49□□□□□ -2.01
SPB4YFL002C ELP6Q04868 273 aa2.49□□□□□ -2.01
SPB4YFL002C YHR086W-AQ3E746 53 aa2.49□□□□□ -2.01
SPB4YFL002C HPA3P39979 161 aa2.48□□□□□ -2.01
SPB4YFL002C FLX1P40464 311 aa2.48□□□□□ -2.01
SPB4YFL002C PHS1P40857 217 aa2.48□□□□□ -2.01
SPB4YFL002C NMA1Q06178 401 aaKnown RBP2.48□□□□□ -2.01
SPB4YFL002C YOR304C-AO14468 76 aa2.47□□□□□ -2.01
SPB4YFL002C YCR050CP25630 102 aa2.47□□□□□ -2.01
SPB4YFL002C RPB7P34087 171 aa2.47□□□□□ -2.01
SPB4YFL002C YLR118CQ12354 227 aa2.47□□□□□ -2.01
SPB4YFL002C RPS25BP0C0T4 108 aaKnown RBP2.47□□□□□ -2.01
SPB4YFL002C DIE2P50076 525 aa2.47□□□□□ -2.01
SPB4YFL002C AIM11P87275 137 aa2.47□□□□□ -2.01
SPB4YFL002C ARL3Q02804 198 aa2.47□□□□□ -2.01
SPB4YFL002C KEI1Q06346 221 aa2.47□□□□□ -2.01
SPB4YFL002C YIR021W-AQ3E739 70 aa2.47□□□□□ -2.01
SPB4YFL002C RPS25AQ3E792 108 aaPredicted RBP2.47□□□□□ -2.01
SPB4YFL002C YHL042WP38729 150 aa2.46□□□□□ -2.02
SPB4YFL002C TMA23Q03525 211 aa2.46□□□□□ -2.02
SPB4YFL002C YGL041W-AP0C5N3 154 aa2.45□□□□□ -2.02
SPB4YFL002C YBR219CP38317 127 aa2.45□□□□□ -2.02
SPB4YFL002C YCL001W-AP87012 153 aa2.45□□□□□ -2.02
SPB4YFL002C SAE3P89114 91 aa2.45□□□□□ -2.02
SPB4YFL002C YOR385WQ08909 290 aa2.45□□□□□ -2.02
SPB4YFL002C MET31Q03081 177 aa2.45□□□□□ -2.02
SPB4YFL002C MZM1Q03429 123 aaPredicted RBP2.45□□□□□ -2.02
SPB4YFL002C YLR162WQ06235 118 aa2.45□□□□□ -2.02
SPB4YFL002C YAL064WP39711 94 aa2.44□□□□□ -2.02
SPB4YFL002C DDP1Q99321 188 aaKnown RBP2.44□□□□□ -2.02
SPB4YFL002C COX5BP00425 151 aa2.43□□□□□ -2.02
SPB4YFL002C ETR1P38071 380 aa2.43□□□□□ -2.02
SPB4YFL002C SFT2P38166 215 aa2.43□□□□□ -2.02
SPB4YFL002C RUB1Q03919 77 aa2.43□□□□□ -2.02
SPB4YFL002C SOM1Q05676 74 aa2.43□□□□□ -2.02
SPB4YFL002C HUT1Q12520 339 aa2.43□□□□□ -2.02
SPB4YFL002C FYV5P25585 152 aa2.42□□□□□ -2.02
SPB4YFL002C GAT4P40569 121 aa2.42□□□□□ -2.02
SPB4YFL002C HYR1P40581 163 aaKnown RBP2.42□□□□□ -2.02
SPB4YFL002C UBR1P19812 1950 aa2.42□□□□□ -2.02
SPB4YFL002C RAF1Q06891 181 aa2.42□□□□□ -2.02
SPB4YFL002C YAE1P47118 141 aaPredicted RBP2.41□□□□□ -2.02
SPB4YFL002C CWC27Q02770 301 aa2.41□□□□□ -2.02
SPB4YFL002C RCE1Q03530 315 aa2.41□□□□□ -2.02
SPB4YFL002C AIM36Q03798 255 aa2.41□□□□□ -2.02
SPB4YFL002C LDB18Q07887 179 aa2.41□□□□□ -2.02
SPB4YFL002C ADK1P07170 222 aaKnown RBP2.4□□□□□ -2.02
SPB4YFL002C RPB11P38902 120 aa2.4□□□□□ -2.02
SPB4YFL002C AVO2Q04749 426 aa2.4□□□□□ -2.02
SPB4YFL002C YMR252CQ04814 134 aa2.4□□□□□ -2.02
SPB4YFL002C YPR153WQ06537 140 aa2.4□□□□□ -2.02
SPB4YFL002C FCF2Q12035 217 aaPredicted RBP2.4□□□□□ -2.02
SPB4YFL002C CMC4Q3E7A9 73 aa2.4□□□□□ -2.02
SPB4YFL002C QCR10P37299 77 aa2.4□□□□□ -2.03
SPB4YFL002C YEL014CP39999 101 aa2.4□□□□□ -2.03
SPB4YFL002C MPC1P53157 130 aaKnown RBP2.4□□□□□ -2.03
SPB4YFL002C KIN28P06242 306 aa2.39□□□□□ -2.03
SPB4YFL002C RPL13BP40212 199 aaKnown RBP2.39□□□□□ -2.03
SPB4YFL002C RPL13AQ12690 199 aaPredicted RBP2.39□□□□□ -2.03
SPB4YFL002C QCR8P08525 94 aa2.38□□□□□ -2.03
SPB4YFL002C YER137CP40083 148 aaKnown RBP2.38□□□□□ -2.03
SPB4YFL002C MYO2P19524 1574 aaKnown RBP2.38□□□□□ -2.03
SPB4YFL002C MRPL44P19956 98 aa2.38□□□□□ -2.03
SPB4YFL002C HSP150P32478 413 aa2.38□□□□□ -2.03
SPB4YFL002C YEL008WP40001 126 aa2.38□□□□□ -2.03
SPB4YFL002C KTI11Q3E840 82 aa2.38□□□□□ -2.03
SPB4YFL002C LHP1P33399 275 aaKnown RBP2.37□□□□□ -2.03
SPB4YFL002C IPT1P38954 527 aa2.37□□□□□ -2.03
SPB4YFL002C GPI11Q06636 219 aa2.37□□□□□ -2.03
SPB4YFL002C YLR042CQ07990 161 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms