RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W YBL010CP32788 280 aa3.11□□□□□ -1.91
UBC6YER100W RPB7P34087 171 aa3.11□□□□□ -1.91
UBC6YER100W YEL067CP39978 195 aa3.11□□□□□ -1.91
UBC6YER100W FRQ1Q06389 190 aa3.11□□□□□ -1.91
UBC6YER100W YDL241WQ07738 123 aa3.11□□□□□ -1.91
UBC6YER100W TRS20P38334 175 aa3.1□□□□□ -1.91
UBC6YER100W VMA7P39111 118 aa3.1□□□□□ -1.91
UBC6YER100W FLX1P40464 311 aa3.1□□□□□ -1.91
UBC6YER100W ELC1Q03071 99 aa3.1□□□□□ -1.91
UBC6YER100W YHR086W-AQ3E746 53 aa3.1□□□□□ -1.91
UBC6YER100W SLO1Q3E784 85 aa3.1□□□□□ -1.91
UBC6YER100W YNL277W-AQ3E7Z0 62 aa3.1□□□□□ -1.91
UBC6YER100W FLO9P39712 1322 aa3.1□□□□□ -1.91
UBC6YER100W SPG1P50088 95 aa3.09□□□□□ -1.91
UBC6YER100W YLR162WQ06235 118 aa3.09□□□□□ -1.91
UBC6YER100W ADE6P38972 1358 aaKnown RBP3.09□□□□□ -1.92
UBC6YER100W SPA2P23201 1466 aaKnown RBP3.09□□□□□ -1.92
UBC6YER100W HPM1P40481 377 aa3.08□□□□□ -1.92
UBC6YER100W LSM8P47093 109 aaKnown RBP3.08□□□□□ -1.92
UBC6YER100W EMC4P53073 190 aa3.08□□□□□ -1.92
UBC6YER100W TVP18Q04767 167 aa3.08□□□□□ -1.92
UBC6YER100W ELP6Q04868 273 aa3.08□□□□□ -1.92
UBC6YER100W NMA1Q06178 401 aaKnown RBP3.08□□□□□ -1.92
UBC6YER100W RPS25BP0C0T4 108 aaKnown RBP3.07□□□□□ -1.92
UBC6YER100W YAE1P47118 141 aaPredicted RBP3.07□□□□□ -1.92
UBC6YER100W IRC19Q07843 230 aa3.07□□□□□ -1.92
UBC6YER100W YDL157CQ12082 118 aa3.07□□□□□ -1.92
UBC6YER100W RPS25AQ3E792 108 aaPredicted RBP3.07□□□□□ -1.92
UBC6YER100W RPS1AP33442 255 aaKnown RBP3.06□□□□□ -1.92
UBC6YER100W YBR219CP38317 127 aa3.06□□□□□ -1.92
UBC6YER100W ETR1P38071 380 aa3.05□□□□□ -1.92
UBC6YER100W HYR1P40581 163 aaKnown RBP3.05□□□□□ -1.92
UBC6YER100W CWC27Q02770 301 aa3.05□□□□□ -1.92
UBC6YER100W RCE1Q03530 315 aa3.05□□□□□ -1.92
UBC6YER100W ECM5Q03214 1411 aa3.04□□□□□ -1.92
UBC6YER100W RPL13BP40212 199 aaKnown RBP3.04□□□□□ -1.92
UBC6YER100W DIE2P50076 525 aa3.04□□□□□ -1.92
UBC6YER100W YCL001W-AP87012 153 aa3.04□□□□□ -1.92
UBC6YER100W MET31Q03081 177 aa3.04□□□□□ -1.92
UBC6YER100W KEI1Q06346 221 aa3.04□□□□□ -1.92
UBC6YER100W RPL13AQ12690 199 aaPredicted RBP3.04□□□□□ -1.92
UBC6YER100W Q0144Q9ZZW2 109 aa3.04□□□□□ -1.92
UBC6YER100W RPO41P13433 1351 aaKnown RBP3.03□□□□□ -1.92
UBC6YER100W RPS1BP23248 255 aaKnown RBP3.03□□□□□ -1.92
UBC6YER100W YCR050CP25630 102 aa3.03□□□□□ -1.92
UBC6YER100W SFT1P43682 97 aa3.03□□□□□ -1.92
UBC6YER100W YLR099W-AQ3E798 87 aa3.03□□□□□ -1.92
UBC6YER100W YLR422WQ06409 1932 aa3.02□□□□□ -1.93
UBC6YER100W YHL042WP38729 150 aa3.02□□□□□ -1.93
UBC6YER100W SAE3P89114 91 aa3.02□□□□□ -1.93
UBC6YER100W APS2Q00381 147 aa3.02□□□□□ -1.93
UBC6YER100W YMR252CQ04814 134 aa3.02□□□□□ -1.93
UBC6YER100W DUR1,2P32528 1835 aaKnown RBP3.01□□□□□ -1.93
UBC6YER100W YGL041W-AP0C5N3 154 aa3.01□□□□□ -1.93
UBC6YER100W PHS1P40857 217 aa3.01□□□□□ -1.93
UBC6YER100W MZM1Q03429 123 aaPredicted RBP3.01□□□□□ -1.93
UBC6YER100W FAS1P07149 2051 aaKnown RBP3□□□□□ -1.93
UBC6YER100W YGL010WP25338 174 aa3□□□□□ -1.93
UBC6YER100W UGX2P32772 223 aa3□□□□□ -1.93
UBC6YER100W YOR304C-AO14468 76 aa2.99□□□□□ -1.93
UBC6YER100W YAL064WP39711 94 aa2.99□□□□□ -1.93
UBC6YER100W AIM11P87275 137 aa2.99□□□□□ -1.93
UBC6YER100W YLR118CQ12354 227 aa2.99□□□□□ -1.93
UBC6YER100W COX5BP00425 151 aa2.98□□□□□ -1.93
UBC6YER100W YKR070WP36151 352 aaKnown RBP2.98□□□□□ -1.93
UBC6YER100W TMA23Q03525 211 aa2.98□□□□□ -1.93
UBC6YER100W YOR385WQ08909 290 aa2.98□□□□□ -1.93
UBC6YER100W HUT1Q12520 339 aa2.98□□□□□ -1.93
UBC6YER100W YNL146C-AQ3E7Z1 64 aa2.98□□□□□ -1.93
UBC6YER100W FYV5P25585 152 aa2.97□□□□□ -1.93
UBC6YER100W SOM1Q05676 74 aa2.97□□□□□ -1.93
UBC6YER100W RAF1Q06891 181 aa2.97□□□□□ -1.93
UBC6YER100W TAR1Q8TGM6 124 aa2.97□□□□□ -1.93
UBC6YER100W QCR8P08525 94 aa2.96□□□□□ -1.94
UBC6YER100W YPR153WQ06537 140 aa2.96□□□□□ -1.94
UBC6YER100W DDP1Q99321 188 aaKnown RBP2.96□□□□□ -1.94
UBC6YER100W YEL014CP39999 101 aa2.95□□□□□ -1.94
UBC6YER100W YGL230CP53074 147 aa2.95□□□□□ -1.94
UBC6YER100W MPC1P53157 130 aaKnown RBP2.95□□□□□ -1.94
UBC6YER100W ARL3Q02804 198 aa2.95□□□□□ -1.94
UBC6YER100W FCF2Q12035 217 aaPredicted RBP2.95□□□□□ -1.94
UBC6YER100W CMC4Q3E7A9 73 aa2.95□□□□□ -1.94
UBC6YER100W YEL008WP40001 126 aa2.94□□□□□ -1.94
UBC6YER100W RUB1Q03919 77 aa2.94□□□□□ -1.94
UBC6YER100W AVO2Q04749 426 aa2.94□□□□□ -1.94
UBC6YER100W YIR021W-AQ3E739 70 aa2.94□□□□□ -1.94
UBC6YER100W ADK1P07170 222 aaKnown RBP2.93□□□□□ -1.94
UBC6YER100W MRPL44P19956 98 aa2.93□□□□□ -1.94
UBC6YER100W QCR10P37299 77 aa2.93□□□□□ -1.94
UBC6YER100W ECM31P38122 312 aa2.93□□□□□ -1.94
UBC6YER100W RPB11P38902 120 aa2.93□□□□□ -1.94
UBC6YER100W YFL065CP43539 102 aa2.93□□□□□ -1.94
UBC6YER100W IGO1P53897 168 aa2.93□□□□□ -1.94
UBC6YER100W GPI11Q06636 219 aa2.93□□□□□ -1.94
UBC6YER100W SFT2P38166 215 aa2.92□□□□□ -1.94
UBC6YER100W YBR242WP38331 238 aa2.92□□□□□ -1.94
UBC6YER100W NAT5Q08689 176 aa2.92□□□□□ -1.94
UBC6YER100W COA3Q3E7B2 85 aa2.92□□□□□ -1.94
UBC6YER100W IPT1P38954 527 aa2.91□□□□□ -1.94
UBC6YER100W LDB18Q07887 179 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 137.1 ms