RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C IZH3Q07959 543 aa2.88□□□□□ -1.95
TRS120YDR407C SME1Q12330 94 aaPredicted RBP2.88□□□□□ -1.95
TRS120YDR407C ACC1Q00955 2233 aaKnown RBP2.88□□□□□ -1.95
TRS120YDR407C RPS23AP0CX29 145 aaKnown RBP2.88□□□□□ -1.95
TRS120YDR407C RPS23BP0CX30 145 aa2.88□□□□□ -1.95
TRS120YDR407C LCB3P47013 409 aa2.88□□□□□ -1.95
TRS120YDR407C YTH1Q06102 208 aaPredicted RBP2.88□□□□□ -1.95
TRS120YDR407C YLR050CQ12155 161 aaKnown RBP2.88□□□□□ -1.95
TRS120YDR407C SEN1Q00416 2231 aaKnown RBP2.87□□□□□ -1.95
TRS120YDR407C HTB2P02294 131 aa2.87□□□□□ -1.95
TRS120YDR407C HMX1P32339 317 aa2.87□□□□□ -1.95
TRS120YDR407C YNL200CP40165 246 aaKnown RBP2.87□□□□□ -1.95
TRS120YDR407C YBL071CP38185 102 aa2.87□□□□□ -1.95
TRS120YDR407C PET8P38921 284 aa2.87□□□□□ -1.95
TRS120YDR407C PRE5P40302 234 aaKnown RBP2.87□□□□□ -1.95
TRS120YDR407C SSU72P53538 206 aaPredicted RBP2.87□□□□□ -1.95
TRS120YDR407C TSA2Q04120 196 aa2.87□□□□□ -1.95
TRS120YDR407C ADH6Q04894 360 aaKnown RBP2.87□□□□□ -1.95
TRS120YDR407C FOL3Q12676 427 aaPredicted RBP2.87□□□□□ -1.95
TRS120YDR407C ADH2P00331 348 aaKnown RBP2.87□□□□□ -1.95
TRS120YDR407C HTB1P02293 131 aaKnown RBP2.87□□□□□ -1.95
TRS120YDR407C URA5P13298 226 aaKnown RBP2.87□□□□□ -1.95
TRS120YDR407C STE4P18851 423 aa2.87□□□□□ -1.95
TRS120YDR407C TCA17P32613 152 aa2.87□□□□□ -1.95
TRS120YDR407C MOH1P38191 138 aa2.87□□□□□ -1.95
TRS120YDR407C YIL163CP40448 117 aa2.87□□□□□ -1.95
TRS120YDR407C UBC13P52490 153 aa2.87□□□□□ -1.95
TRS120YDR407C YNR071CP53757 342 aa2.87□□□□□ -1.95
TRS120YDR407C ELA1P53861 379 aaPredicted RBP2.87□□□□□ -1.95
TRS120YDR407C SED1Q01589 338 aa2.87□□□□□ -1.95
TRS120YDR407C MDM10P18409 493 aa2.86□□□□□ -1.95
TRS120YDR407C YKL075CP36083 450 aa2.86□□□□□ -1.95
TRS120YDR407C MIC12P38341 106 aa2.86□□□□□ -1.95
TRS120YDR407C MIX14Q04341 121 aa2.86□□□□□ -1.95
TRS120YDR407C YOL024WQ08172 172 aa2.86□□□□□ -1.95
TRS120YDR407C POL2P21951 2222 aaKnown RBP2.86□□□□□ -1.95
TRS120YDR407C MRP49P32388 137 aa2.86□□□□□ -1.95
TRS120YDR407C YDL183CP48569 320 aa2.86□□□□□ -1.95
TRS120YDR407C SAE3P89114 91 aa2.86□□□□□ -1.95
TRS120YDR407C DFM1Q12743 341 aaKnown RBP2.86□□□□□ -1.95
TRS120YDR407C SEC16P48415 2195 aaKnown RBP2.86□□□□□ -1.95
TRS120YDR407C YKR032WP36127 104 aa2.86□□□□□ -1.95
TRS120YDR407C ECM33P38248 429 aaKnown RBP2.86□□□□□ -1.95
TRS120YDR407C UIP3P39547 235 aa2.86□□□□□ -1.95
TRS120YDR407C YEL067CP39978 195 aa2.86□□□□□ -1.95
TRS120YDR407C YNL194CP40169 301 aa2.86□□□□□ -1.95
TRS120YDR407C GRH1Q04410 372 aaKnown RBP2.86□□□□□ -1.95
TRS120YDR407C NAT5Q08689 176 aa2.86□□□□□ -1.95
TRS120YDR407C YPL278CQ08990 100 aa2.86□□□□□ -1.95
TRS120YDR407C YMR316C-AI2HB70 103 aa2.85□□□□□ -1.95
TRS120YDR407C YGL010WP25338 174 aa2.85□□□□□ -1.95
TRS120YDR407C YKL044WP36092 106 aa2.85□□□□□ -1.95
TRS120YDR407C YPT10P38146 199 aa2.85□□□□□ -1.95
TRS120YDR407C LSM2P38203 95 aaKnown RBP2.85□□□□□ -1.95
TRS120YDR407C RPB11P38902 120 aa2.85□□□□□ -1.95
TRS120YDR407C RTS2P40962 232 aa2.85□□□□□ -1.95
TRS120YDR407C YPI1P43587 155 aa2.85□□□□□ -1.95
TRS120YDR407C WSC2P53832 503 aa2.85□□□□□ -1.95
TRS120YDR407C VPS71Q03433 280 aa2.85□□□□□ -1.95
TRS120YDR407C COX2P00410 251 aa2.85□□□□□ -1.95
TRS120YDR407C GPP2P40106 250 aaKnown RBP2.85□□□□□ -1.95
TRS120YDR407C MRPL23Q12487 163 aaPredicted RBP2.85□□□□□ -1.95
TRS120YDR407C YCL001W-BQ96VH2 84 aa2.85□□□□□ -1.95
TRS120YDR407C PAM17P36147 197 aa2.85□□□□□ -1.95
TRS120YDR407C SFT2P38166 215 aa2.85□□□□□ -1.95
TRS120YDR407C ALG14P38242 237 aa2.85□□□□□ -1.95
TRS120YDR407C YPL073CP40323 161 aa2.85□□□□□ -1.95
TRS120YDR407C YGL118CP53132 145 aa2.85□□□□□ -1.95
TRS120YDR407C TOM7P53507 60 aa2.85□□□□□ -1.95
TRS120YDR407C YNL234WP53857 426 aa2.85□□□□□ -1.95
TRS120YDR407C DAD3P69850 94 aa2.85□□□□□ -1.95
TRS120YDR407C UPS3Q04006 179 aa2.85□□□□□ -1.95
TRS120YDR407C YHP1Q04116 353 aa2.85□□□□□ -1.95
TRS120YDR407C LIP2Q06005 328 aa2.85□□□□□ -1.95
TRS120YDR407C PFY1P07274 126 aa2.84□□□□□ -1.95
TRS120YDR407C DAL80P26343 269 aa2.84□□□□□ -1.95
TRS120YDR407C CMC1P36064 111 aa2.84□□□□□ -1.95
TRS120YDR407C DOG2P38773 246 aa2.84□□□□□ -1.95
TRS120YDR407C DOG1P38774 246 aa2.84□□□□□ -1.95
TRS120YDR407C AGE2P40529 298 aa2.84□□□□□ -1.95
TRS120YDR407C PIR5P46999 287 aa2.84□□□□□ -1.95
TRS120YDR407C CCW12Q12127 133 aa2.84□□□□□ -1.95
TRS120YDR407C RFM1Q12192 310 aa2.84□□□□□ -1.95
TRS120YDR407C NOP1P15646 327 aaKnown RBP2.84□□□□□ -1.95
TRS120YDR407C PCL7P40186 285 aa2.84□□□□□ -1.95
TRS120YDR407C TOS6P48560 102 aa2.84□□□□□ -1.95
TRS120YDR407C SDH7Q04401 133 aa2.84□□□□□ -1.95
TRS120YDR407C YDL218WQ07629 317 aa2.84□□□□□ -1.95
TRS120YDR407C TIM18Q08749 192 aa2.84□□□□□ -1.95
TRS120YDR407C ATO3Q12359 275 aa2.84□□□□□ -1.95
TRS120YDR407C YNL198CP40166 100 aa2.84□□□□□ -1.96
TRS120YDR407C HAC1P41546 238 aa2.84□□□□□ -1.96
TRS120YDR407C BNA2P47125 453 aa2.84□□□□□ -1.96
TRS120YDR407C PBP4Q07362 185 aaKnown RBP2.84□□□□□ -1.96
TRS120YDR407C SCW10Q04951 389 aa2.83□□□□□ -1.96
TRS120YDR407C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
TRS120YDR407C YDR215CQ12240 137 aa2.83□□□□□ -1.96
TRS120YDR407C NUD1P32336 851 aa2.83□□□□□ -1.96
TRS120YDR407C SUR7P54003 302 aa2.83□□□□□ -1.96
TRS120YDR407C YIL014C-AQ02598 104 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 76.5 ms