RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C MID2P36027 376 aa3.34□□□□□ -1.87
SPR28YDR218C YPI1P43587 155 aa3.34□□□□□ -1.87
SPR28YDR218C BAT2P47176 376 aaKnown RBP3.34□□□□□ -1.87
SPR28YDR218C DIE2P50076 525 aa3.34□□□□□ -1.87
SPR28YDR218C MPC3P53311 146 aa3.34□□□□□ -1.87
SPR28YDR218C PIR1Q03178 341 aa3.34□□□□□ -1.87
SPR28YDR218C IRC23Q08416 157 aa3.34□□□□□ -1.87
SPR28YDR218C GEA1P47102 1408 aaPredicted RBP3.34□□□□□ -1.88
SPR28YDR218C HAP3P13434 144 aa3.33□□□□□ -1.88
SPR28YDR218C YAR029WP39549 74 aa3.33□□□□□ -1.88
SPR28YDR218C PAM16P42949 149 aa3.33□□□□□ -1.88
SPR28YDR218C NSE4P43124 402 aa3.33□□□□□ -1.88
SPR28YDR218C UPS3Q04006 179 aa3.33□□□□□ -1.88
SPR28YDR218C YHP1Q04116 353 aa3.33□□□□□ -1.88
SPR28YDR218C YKL068W-AQ3E826 78 aa3.33□□□□□ -1.88
SPR28YDR218C SCS22Q6Q595 175 aa3.33□□□□□ -1.88
SPR28YDR218C CAT8P39113 1433 aa3.33□□□□□ -1.88
SPR28YDR218C YGL041W-AP0C5N3 154 aa3.32□□□□□ -1.88
SPR28YDR218C RPL33BP41056 107 aaKnown RBP3.32□□□□□ -1.88
SPR28YDR218C DOC1P53068 250 aa3.32□□□□□ -1.88
SPR28YDR218C NHP10Q03435 203 aa3.32□□□□□ -1.88
SPR28YDR218C YML079WQ03629 201 aa3.32□□□□□ -1.88
SPR28YDR218C YDR114CQ04597 100 aa3.32□□□□□ -1.88
SPR28YDR218C YMR252CQ04814 134 aa3.32□□□□□ -1.88
SPR28YDR218C RAF1Q06891 181 aa3.32□□□□□ -1.88
SPR28YDR218C CSI2Q08054 341 aa3.32□□□□□ -1.88
SPR28YDR218C YOR268CQ08734 132 aa3.32□□□□□ -1.88
SPR28YDR218C ATG40Q99325 256 aa3.32□□□□□ -1.88
SPR28YDR218C ADE6P38972 1358 aaKnown RBP3.31□□□□□ -1.88
SPR28YDR218C SMD3P43321 101 aaKnown RBP3.31□□□□□ -1.88
SPR28YDR218C YOR015WQ12169 119 aa3.31□□□□□ -1.88
SPR28YDR218C YOR381W-AQ3E804 55 aa3.31□□□□□ -1.88
SPR28YDR218C YOL162WP0CF19 215 aa3.3□□□□□ -1.88
SPR28YDR218C YHR180WP38868 163 aa3.3□□□□□ -1.88
SPR28YDR218C YMR103CQ04436 120 aa3.3□□□□□ -1.88
SPR28YDR218C FEX1Q08913 375 aa3.3□□□□□ -1.88
SPR28YDR218C FEX2Q08991 375 aa3.3□□□□□ -1.88
SPR28YDR218C DUR1,2P32528 1835 aaKnown RBP3.29□□□□□ -1.88
SPR28YDR218C COX5BP00425 151 aa3.29□□□□□ -1.88
SPR28YDR218C RPS23AP0CX29 145 aaKnown RBP3.29□□□□□ -1.88
SPR28YDR218C RPS23BP0CX30 145 aa3.29□□□□□ -1.88
SPR28YDR218C YAL064WP39711 94 aa3.29□□□□□ -1.88
SPR28YDR218C CIS3P47001 227 aa3.29□□□□□ -1.88
SPR28YDR218C MZM1Q03429 123 aaPredicted RBP3.29□□□□□ -1.88
SPR28YDR218C YMR090WQ04304 227 aaKnown RBP3.29□□□□□ -1.88
SPR28YDR218C HSP26P15992 214 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
SPR28YDR218C MRPL44P19956 98 aa3.28□□□□□ -1.88
SPR28YDR218C PRE1P22141 198 aaKnown RBP3.28□□□□□ -1.88
SPR28YDR218C SCM4P32564 187 aa3.28□□□□□ -1.88
SPR28YDR218C MRPS9P38120 278 aa3.28□□□□□ -1.88
SPR28YDR218C ERV15P38312 142 aa3.28□□□□□ -1.88
SPR28YDR218C YNR077CP53758 84 aa3.28□□□□□ -1.88
SPR28YDR218C CUE4Q04201 117 aaPredicted RBP3.28□□□□□ -1.88
SPR28YDR218C FIT1Q04433 528 aa3.28□□□□□ -1.88
SPR28YDR218C GTT2Q12390 233 aa3.28□□□□□ -1.88
SPR28YDR218C MED11Q99278 115 aa3.28□□□□□ -1.88
SPR28YDR218C FKS1P38631 1876 aaKnown RBP3.28□□□□□ -1.88
SPR28YDR218C PEX4P29340 183 aa3.27□□□□□ -1.89
SPR28YDR218C YEL045CP32616 141 aa3.27□□□□□ -1.89
SPR28YDR218C YBR209WP38311 105 aa3.27□□□□□ -1.89
SPR28YDR218C TIR3P40552 269 aa3.27□□□□□ -1.89
SPR28YDR218C SWC7Q06707 132 aa3.27□□□□□ -1.89
SPR28YDR218C TMC1Q08422 150 aaPredicted RBP3.27□□□□□ -1.89
SPR28YDR218C YOR385WQ08909 290 aa3.27□□□□□ -1.89
SPR28YDR218C ATG41Q12048 136 aa3.27□□□□□ -1.89
SPR28YDR218C YPR013CQ12145 317 aa3.27□□□□□ -1.89
SPR28YDR218C RPL13AQ12690 199 aaPredicted RBP3.27□□□□□ -1.89
SPR28YDR218C YCR075W-AQ3E830 75 aa3.27□□□□□ -1.89
SPR28YDR218C RSF2P46974 1380 aa3.26□□□□□ -1.89
SPR28YDR218C YLR236CA0A023PZG4 107 aa3.26□□□□□ -1.89
SPR28YDR218C MRPL11P36521 249 aaPredicted RBP3.26□□□□□ -1.89
SPR28YDR218C YHL042WP38729 150 aa3.26□□□□□ -1.89
SPR28YDR218C CCS1P40202 249 aaKnown RBP3.26□□□□□ -1.89
SPR28YDR218C YFR035CP43608 114 aa3.26□□□□□ -1.89
SPR28YDR218C ERG25P53045 309 aa3.26□□□□□ -1.89
SPR28YDR218C GPI19Q04082 140 aa3.26□□□□□ -1.89
SPR28YDR218C SOM1Q05676 74 aa3.26□□□□□ -1.89
SPR28YDR218C LTE1P07866 1435 aa3.26□□□□□ -1.89
SPR28YDR218C INO4P13902 151 aa3.25□□□□□ -1.89
SPR28YDR218C QCR10P37299 77 aa3.25□□□□□ -1.89
SPR28YDR218C ECM31P38122 312 aa3.25□□□□□ -1.89
SPR28YDR218C YGR269WP40326 108 aa3.25□□□□□ -1.89
SPR28YDR218C YIL059CP40520 121 aa3.25□□□□□ -1.89
SPR28YDR218C MET5P47169 1442 aa3.25□□□□□ -1.89
SPR28YDR218C TY3B-IQ7LHG5 1498 aaKnown RBP3.24□□□□□ -1.89
SPR28YDR218C MIG1P27705 504 aa3.24□□□□□ -1.89
SPR28YDR218C TDA2P40045 126 aa3.24□□□□□ -1.89
SPR28YDR218C NMA1Q06178 401 aaKnown RBP3.24□□□□□ -1.89
SPR28YDR218C YPR174CQ06616 221 aaPredicted RBP3.24□□□□□ -1.89
SPR28YDR218C YDL157CQ12082 118 aa3.24□□□□□ -1.89
SPR28YDR218C YOR376W-AQ3E805 51 aa3.24□□□□□ -1.89
SPR28YDR218C MDM35O60200 86 aa3.23□□□□□ -1.89
SPR28YDR218C YKL044WP36092 106 aa3.23□□□□□ -1.89
SPR28YDR218C SRL3P36167 246 aa3.23□□□□□ -1.89
SPR28YDR218C YEL067CP39978 195 aa3.23□□□□□ -1.89
SPR28YDR218C SNU13P39990 126 aaKnown RBP3.23□□□□□ -1.89
SPR28YDR218C PIR5P46999 287 aa3.23□□□□□ -1.89
SPR28YDR218C BOL2P53082 120 aa3.23□□□□□ -1.89
SPR28YDR218C ERV14P53173 138 aa3.23□□□□□ -1.89
SPR28YDR218C PIN3Q06449 215 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 62 ms