RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A PRE1P22141 198 aaKnown RBP-0.37□□□□□ -2.47
TFB5YDR079C-A TRX2P22803 104 aaKnown RBP-0.37□□□□□ -2.47
TFB5YDR079C-A BUB2P26448 306 aaPredicted RBP-0.37□□□□□ -2.47
TFB5YDR079C-A HOM6P31116 359 aaKnown RBP-0.37□□□□□ -2.47
TFB5YDR079C-A VPH2P32341 215 aa-0.37□□□□□ -2.47
TFB5YDR079C-A SRP21P32342 167 aa-0.37□□□□□ -2.47
TFB5YDR079C-A SMI1P32566 505 aa-0.37□□□□□ -2.47
TFB5YDR079C-A COX13P32799 129 aa-0.37□□□□□ -2.47
TFB5YDR079C-A EMP24P32803 203 aaKnown RBP-0.37□□□□□ -2.47
TFB5YDR079C-A SPT4P32914 102 aaPredicted RBP-0.37□□□□□ -2.47
TFB5YDR079C-A VPS21P36017 210 aaKnown RBP-0.37□□□□□ -2.47
TFB5YDR079C-A YKL162CP36052 402 aa-0.37□□□□□ -2.47
TFB5YDR079C-A UTP30P36144 274 aaKnown RBP-0.37□□□□□ -2.47
TFB5YDR079C-A LAS1P36146 502 aaPredicted RBP-0.37□□□□□ -2.47
TFB5YDR079C-A ATP3P38077 311 aaKnown RBP-0.37□□□□□ -2.47
TFB5YDR079C-A RRT1P38192 103 aa-0.37□□□□□ -2.47
TFB5YDR079C-A YHL049CP38722 271 aa-0.37□□□□□ -2.47
TFB5YDR079C-A SHU1P38751 150 aa-0.37□□□□□ -2.47
TFB5YDR079C-A YHR022CP38763 256 aa-0.37□□□□□ -2.47
TFB5YDR079C-A YHR125WP38831 101 aa-0.37□□□□□ -2.47
TFB5YDR079C-A DSE2P38844 325 aa-0.37□□□□□ -2.47
TFB5YDR079C-A LIN1P38852 340 aaPredicted RBP-0.37□□□□□ -2.47
TFB5YDR079C-A AIM18P38884 321 aa-0.37□□□□□ -2.47
TFB5YDR079C-A YAR068WP39564 161 aa-0.37□□□□□ -2.47
TFB5YDR079C-A AIM2P39721 246 aa-0.37□□□□□ -2.47
TFB5YDR079C-A SNU13P39990 126 aaKnown RBP-0.37□□□□□ -2.47
TFB5YDR079C-A YER189WP40104 122 aa-0.37□□□□□ -2.47
TFB5YDR079C-A ARC15P40518 154 aaRIP-Chip data-0.37□□□□□ -2.47not detected
TFB5YDR079C-A GLC8P41818 229 aa-0.37□□□□□ -2.47
TFB5YDR079C-A YFL012WP43580 148 aa-0.37□□□□□ -2.47
TFB5YDR079C-A SSN8P47821 323 aa-0.37□□□□□ -2.47
TFB5YDR079C-A BRR6P53062 197 aa-0.37□□□□□ -2.47
TFB5YDR079C-A YGL230CP53074 147 aa-0.37□□□□□ -2.47
TFB5YDR079C-A BOL2P53082 120 aa-0.37□□□□□ -2.47
TFB5YDR079C-A NQM1P53228 333 aaPredicted RBP-0.37□□□□□ -2.47
TFB5YDR079C-A YGR050CP53231 118 aa-0.37□□□□□ -2.47
TFB5YDR079C-A VOA1P53262 265 aa-0.37□□□□□ -2.47
TFB5YDR079C-A HST4P53688 370 aa-0.37□□□□□ -2.47
TFB5YDR079C-A BUD25P85052 153 aa-0.37□□□□□ -2.47
TFB5YDR079C-A SMD1Q02260 146 aaPredicted RBP-0.37□□□□□ -2.47
TFB5YDR079C-A PET117Q02771 107 aa-0.37□□□□□ -2.47
TFB5YDR079C-A NHP10Q03435 203 aa-0.37□□□□□ -2.47
TFB5YDR079C-A YMR295CQ03559 197 aa-0.37□□□□□ -2.47
TFB5YDR079C-A LIP1Q03579 150 aa-0.37□□□□□ -2.47
TFB5YDR079C-A YMR010WQ03687 405 aa-0.37□□□□□ -2.47
TFB5YDR079C-A AIM36Q03798 255 aa-0.37□□□□□ -2.47
TFB5YDR079C-A TVP15Q03860 143 aa-0.37□□□□□ -2.47
TFB5YDR079C-A YMR122CQ03879 124 aa-0.37□□□□□ -2.47
TFB5YDR079C-A PLP1Q04004 230 aa-0.37□□□□□ -2.47
TFB5YDR079C-A BNA7Q04066 261 aa-0.37□□□□□ -2.47
TFB5YDR079C-A SHH3Q04487 196 aa-0.37□□□□□ -2.47
TFB5YDR079C-A PEX30Q06169 523 aa-0.37□□□□□ -2.47
TFB5YDR079C-A NOC4Q06512 552 aaPredicted RBP-0.37□□□□□ -2.47
TFB5YDR079C-A YET3Q07451 203 aa-0.37□□□□□ -2.47
TFB5YDR079C-A RLP24Q07915 199 aaKnown RBP-0.37□□□□□ -2.47
TFB5YDR079C-A AAD15Q08361 143 aa-0.37□□□□□ -2.47
TFB5YDR079C-A GET4Q12125 312 aa-0.37□□□□□ -2.47
TFB5YDR079C-A RPN5Q12250 445 aaKnown RBP-0.37□□□□□ -2.47
TFB5YDR079C-A YLR118CQ12354 227 aa-0.37□□□□□ -2.47
TFB5YDR079C-A PAU17Q12370 124 aa-0.37□□□□□ -2.47
TFB5YDR079C-A RDI1Q12434 202 aa-0.37□□□□□ -2.47
TFB5YDR079C-A YPR145C-AQ2V2P0 78 aa-0.37□□□□□ -2.47
TFB5YDR079C-A YDR119W-AQ2V2P9 66 aa-0.37□□□□□ -2.47
TFB5YDR079C-A YKL018C-AQ3E7A7 99 aa-0.37□□□□□ -2.47
TFB5YDR079C-A YMR001C-AQ8TGS9 76 aa-0.37□□□□□ -2.47
TFB5YDR079C-A NCB2Q92317 146 aa-0.37□□□□□ -2.47
TFB5YDR079C-A PET20Q99373 253 aa-0.37□□□□□ -2.47
TFB5YDR079C-A ENV10Q99382 181 aa-0.37□□□□□ -2.47
TFB5YDR079C-A IZH4Q99393 312 aa-0.37□□□□□ -2.47
TFB5YDR079C-A VPS63O13549 108 aa-0.38□□□□□ -2.47
TFB5YDR079C-A YPR096CO13587 100 aa-0.38□□□□□ -2.47
TFB5YDR079C-A ATP6P00854 259 aa-0.38□□□□□ -2.47
TFB5YDR079C-A SPT3P06844 337 aa-0.38□□□□□ -2.47
TFB5YDR079C-A RPS19AP07280 144 aaKnown RBP-0.38□□□□□ -2.47
TFB5YDR079C-A RPS19BP07281 144 aaPredicted RBP-0.38□□□□□ -2.47
TFB5YDR079C-A SEC4P07560 215 aaKnown RBP-0.38□□□□□ -2.47
TFB5YDR079C-A YER188C-AP0C0V2 99 aa-0.38□□□□□ -2.47
TFB5YDR079C-A YBL039W-BP0C268 59 aa-0.38□□□□□ -2.47
TFB5YDR079C-A MRP13P12686 339 aa-0.38□□□□□ -2.47
TFB5YDR079C-A FUS3P16892 353 aaKnown RBP-0.38□□□□□ -2.47
TFB5YDR079C-A SEC59P20048 519 aa-0.38□□□□□ -2.47
TFB5YDR079C-A TRX1P22217 103 aaKnown RBP-0.38□□□□□ -2.47
TFB5YDR079C-A DBR1P24309 405 aaKnown RBP-0.38□□□□□ -2.47
TFB5YDR079C-A YCR101CP25607 182 aa-0.38□□□□□ -2.47
TFB5YDR079C-A YCR099CP25657 155 aa-0.38□□□□□ -2.47
TFB5YDR079C-A ATP7P30902 174 aa-0.38□□□□□ -2.47
TFB5YDR079C-A ARO7P32178 256 aa-0.38□□□□□ -2.47
TFB5YDR079C-A MRP49P32388 137 aa-0.38□□□□□ -2.47
TFB5YDR079C-A SSO1P32867 290 aa-0.38□□□□□ -2.47
TFB5YDR079C-A NTF2P33331 125 aaKnown RBP-0.38□□□□□ -2.47
TFB5YDR079C-A LTV1P34078 463 aa-0.38□□□□□ -2.47
TFB5YDR079C-A JEN1P36035 616 aa-0.38□□□□□ -2.47
TFB5YDR079C-A YKR032WP36127 104 aa-0.38□□□□□ -2.47
TFB5YDR079C-A SHB17P36136 271 aaKnown RBP-0.38□□□□□ -2.47
TFB5YDR079C-A FRM2P37261 193 aa-0.38□□□□□ -2.47
TFB5YDR079C-A PDX3P38075 228 aaKnown RBP-0.38□□□□□ -2.47
TFB5YDR079C-A UMP1P38293 148 aa-0.38□□□□□ -2.47
TFB5YDR079C-A NTC20P38302 140 aaPredicted RBP-0.38□□□□□ -2.47
TFB5YDR079C-A YHL042WP38729 150 aa-0.38□□□□□ -2.47
TFB5YDR079C-A IKI1P38874 309 aa-0.38□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms