RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	YEL067C	P39978	195 aa		3.6	□□□□□ -1.83
SNF11	YDR073W	AIM11	P87275	137 aa		3.6	□□□□□ -1.83
SNF11	YDR073W	ARL3	Q02804	198 aa		3.6	□□□□□ -1.83
SNF11	YDR073W	YHP1	Q04116	353 aa		3.6	□□□□□ -1.83
SNF11	YDR073W	CSI2	Q08054	341 aa		3.6	□□□□□ -1.83
SNF11	YDR073W	ADE6	P38972	1358 aa	Known RBP	3.6	□□□□□ -1.83
SNF11	YDR073W	MYO2	P19524	1574 aa	Known RBP	3.59	□□□□□ -1.83
SNF11	YDR073W	INO4	P13902	151 aa		3.59	□□□□□ -1.83
SNF11	YDR073W	YGR269W	P40326	108 aa		3.59	□□□□□ -1.83
SNF11	YDR073W	YLR118C	Q12354	227 aa		3.59	□□□□□ -1.83
SNF11	YDR073W	SCS22	Q6Q595	175 aa		3.59	□□□□□ -1.83
SNF11	YDR073W	STF2	P16965	84 aa		3.58	□□□□□ -1.84
SNF11	YDR073W	UTR5	P32630	166 aa		3.58	□□□□□ -1.84
SNF11	YDR073W	UGX2	P32772	223 aa		3.58	□□□□□ -1.84
SNF11	YDR073W	YOR304C-A	O14468	76 aa		3.57	□□□□□ -1.84
SNF11	YDR073W	UBR1	P19812	1950 aa		3.57	□□□□□ -1.84
SNF11	YDR073W	MAK31	P23059	88 aa		3.57	□□□□□ -1.84
SNF11	YDR073W	HSL1	P34244	1518 aa		3.57	□□□□□ -1.84
SNF11	YDR073W	PHS1	P40857	217 aa		3.57	□□□□□ -1.84
SNF11	YDR073W	YDL241W	Q07738	123 aa		3.57	□□□□□ -1.84
SNF11	YDR073W	FIT2	Q08906	153 aa		3.57	□□□□□ -1.84
SNF11	YDR073W	YDL157C	Q12082	118 aa		3.57	□□□□□ -1.84
SNF11	YDR073W	TMA19	P35691	167 aa	Known RBP	3.56	□□□□□ -1.84
SNF11	YDR073W	CCS1	P40202	249 aa	Known RBP	3.56	□□□□□ -1.84
SNF11	YDR073W	ALB1	P47019	175 aa	Predicted RBP	3.56	□□□□□ -1.84
SNF11	YDR073W	YHR007C-A	Q07074	71 aa		3.56	□□□□□ -1.84
SNF11	YDR073W	MDM35	O60200	86 aa		3.55	□□□□□ -1.84
SNF11	YDR073W	YGL041W-A	P0C5N3	154 aa		3.55	□□□□□ -1.84
SNF11	YDR073W	YKR070W	P36151	352 aa	Known RBP	3.55	□□□□□ -1.84
SNF11	YDR073W	LSM8	P47093	109 aa	Known RBP	3.55	□□□□□ -1.84
SNF11	YDR073W	TVP18	Q04767	167 aa		3.55	□□□□□ -1.84
SNF11	YDR073W	YMR030W-A	Q3E760	96 aa		3.55	□□□□□ -1.84
SNF11	YDR073W	FLX1	P40464	311 aa		3.54	□□□□□ -1.84
SNF11	YDR073W	DAN1	P47178	298 aa		3.54	□□□□□ -1.84
SNF11	YDR073W	TMA23	Q03525	211 aa		3.54	□□□□□ -1.84
SNF11	YDR073W	KEI1	Q06346	221 aa		3.54	□□□□□ -1.84
SNF11	YDR073W	FAB1	P34756	2278 aa		3.53	□□□□□ -1.84
SNF11	YDR073W	SFT2	P38166	215 aa		3.53	□□□□□ -1.84
SNF11	YDR073W	MPM1	P40364	252 aa		3.53	□□□□□ -1.84
SNF11	YDR073W	AIM36	Q03798	255 aa		3.53	□□□□□ -1.84
SNF11	YDR073W	RUB1	Q03919	77 aa		3.53	□□□□□ -1.84
SNF11	YDR073W	FLO9	P39712	1322 aa		3.52	□□□□□ -1.85
SNF11	YDR073W	FAS1	P07149	2051 aa	Known RBP	3.52	□□□□□ -1.85
SNF11	YDR073W	YCR050C	P25630	102 aa		3.52	□□□□□ -1.85
SNF11	YDR073W	ETR1	P38071	380 aa		3.52	□□□□□ -1.85
SNF11	YDR073W	DIE2	P50076	525 aa		3.52	□□□□□ -1.85
SNF11	YDR073W	RGM1	Q00453	211 aa		3.52	□□□□□ -1.85
SNF11	YDR073W	MZM1	Q03429	123 aa	Predicted RBP	3.52	□□□□□ -1.85
SNF11	YDR073W	NMA1	Q06178	401 aa	Known RBP	3.52	□□□□□ -1.85
SNF11	YDR073W	KIN28	P06242	306 aa		3.51	□□□□□ -1.85
SNF11	YDR073W	IRC19	Q07843	230 aa		3.51	□□□□□ -1.85
SNF11	YDR073W	LDB18	Q07887	179 aa		3.51	□□□□□ -1.85
SNF11	YDR073W	DDP1	Q99321	188 aa	Known RBP	3.51	□□□□□ -1.85
SNF11	YDR073W	YKR045C	P36138	183 aa		3.5	□□□□□ -1.85
SNF11	YDR073W	PEP8	P40335	379 aa		3.5	□□□□□ -1.85
SNF11	YDR073W	GAT4	P40569	121 aa		3.5	□□□□□ -1.85
SNF11	YDR073W	SAE3	P89114	91 aa		3.5	□□□□□ -1.85
SNF11	YDR073W	RPS25B	P0C0T4	108 aa	Known RBP	3.49	□□□□□ -1.85
SNF11	YDR073W	YER137C	P40083	148 aa	Known RBP	3.49	□□□□□ -1.85
SNF11	YDR073W	MPC1	P53157	130 aa	Known RBP	3.49	□□□□□ -1.85
SNF11	YDR073W	MET31	Q03081	177 aa		3.49	□□□□□ -1.85
SNF11	YDR073W	ELP6	Q04868	273 aa		3.49	□□□□□ -1.85
SNF11	YDR073W	RAF1	Q06891	181 aa		3.49	□□□□□ -1.85
SNF11	YDR073W	HUT1	Q12520	339 aa		3.49	□□□□□ -1.85
SNF11	YDR073W	RPS25A	Q3E792	108 aa	Predicted RBP	3.49	□□□□□ -1.85
SNF11	YDR073W	SOM1	Q05676	74 aa		3.48	□□□□□ -1.85
SNF11	YDR073W	YOR385W	Q08909	290 aa		3.48	□□□□□ -1.85
SNF11	YDR073W	SPP41	P38904	1435 aa		3.47	□□□□□ -1.85
SNF11	YDR073W	YHL042W	P38729	150 aa		3.47	□□□□□ -1.85
SNF11	YDR073W	FCF2	Q12035	217 aa	Predicted RBP	3.47	□□□□□ -1.85
SNF11	YDR073W	KTI11	Q3E840	82 aa		3.47	□□□□□ -1.85
SNF11	YDR073W	SNT2	P53127	1403 aa		3.46	□□□□□ -1.86
SNF11	YDR073W	RPB7	P34087	171 aa		3.46	□□□□□ -1.86
SNF11	YDR073W	NRG2	P38082	220 aa		3.46	□□□□□ -1.86
SNF11	YDR073W	YAL064W	P39711	94 aa		3.46	□□□□□ -1.86
SNF11	YDR073W	RGI1	P40043	161 aa	Predicted RBP	3.46	□□□□□ -1.86
SNF11	YDR073W	YHR086W-A	Q3E746	53 aa		3.46	□□□□□ -1.86
SNF11	YDR073W	COX5B	P00425	151 aa		3.45	□□□□□ -1.86
SNF11	YDR073W	RPB11	P38902	120 aa		3.45	□□□□□ -1.86
SNF11	YDR073W	FYV5	P25585	152 aa		3.44	□□□□□ -1.86
SNF11	YDR073W	GSP1	P32835	219 aa	Known RBP	3.44	□□□□□ -1.86
SNF11	YDR073W	HPA3	P39979	161 aa		3.44	□□□□□ -1.86
SNF11	YDR073W	YPR153W	Q06537	140 aa		3.44	□□□□□ -1.86
SNF11	YDR073W	ADK1	P07170	222 aa	Known RBP	3.43	□□□□□ -1.86
SNF11	YDR073W	NMT1	P14743	455 aa		3.43	□□□□□ -1.86
SNF11	YDR073W	MRPL44	P19956	98 aa		3.42	□□□□□ -1.86
SNF11	YDR073W	QCR10	P37299	77 aa		3.42	□□□□□ -1.86
SNF11	YDR073W	YBR219C	P38317	127 aa		3.42	□□□□□ -1.86
SNF11	YDR073W	YCL001W-A	P87012	153 aa		3.42	□□□□□ -1.86
SNF11	YDR073W	ANB1	P19211	157 aa		3.41	□□□□□ -1.86
SNF11	YDR073W	LHP1	P33399	275 aa	Known RBP	3.4	□□□□□ -1.87
SNF11	YDR073W	YEL014C	P39999	101 aa		3.4	□□□□□ -1.87
SNF11	YDR073W	HYR1	P40581	163 aa	Known RBP	3.4	□□□□□ -1.87
SNF11	YDR073W	RCE1	Q03530	315 aa		3.39	□□□□□ -1.87
SNF11	YDR073W	AVO2	Q04749	426 aa		3.39	□□□□□ -1.87
SNF11	YDR073W	YER039C-A	P0CD97	72 aa		3.38	□□□□□ -1.87
SNF11	YDR073W	ECM31	P38122	312 aa		3.38	□□□□□ -1.87
SNF11	YDR073W	YLR162W	Q06235	118 aa		3.38	□□□□□ -1.87
SNF11	YDR073W	YLR042C	Q07990	161 aa		3.38	□□□□□ -1.87
SNF11	YDR073W	YOR097C	Q12274	175 aa	Predicted RBP	3.38	□□□□□ -1.87

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