RNA–Protein interactions for RNA: YDL194W

SNF3, Transcript of Plasma membrane low glucose sensor, regulates glucose transport, yeast

Gene SNF3, Length 2,655 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF3	YDL194W	RPS8B	P0CX40	200 aa	Known RBP	4.11	□□□□□ -1.75
SNF3	YDL194W	MAK32	P23060	363 aa		4.11	□□□□□ -1.75
SNF3	YDL194W	SDS23	P53172	527 aa		4.11	□□□□□ -1.75
SNF3	YDL194W	GPI19	Q04082	140 aa		4.11	□□□□□ -1.75
SNF3	YDL194W	YFR032C-B	Q8TGU2	87 aa		4.11	□□□□□ -1.75
SNF3	YDL194W	YMR316C-A	I2HB70	103 aa		4.11	□□□□□ -1.75
SNF3	YDL194W	YCR050C	P25630	102 aa		4.11	□□□□□ -1.75
SNF3	YDL194W	YCR099C	P25657	155 aa		4.11	□□□□□ -1.75
SNF3	YDL194W	SMP1	P38128	452 aa		4.11	□□□□□ -1.75
SNF3	YDL194W	MHF1	Q3E835	90 aa		4.11	□□□□□ -1.75
SNF3	YDL194W	TDA8	Q6B2U8	126 aa		4.11	□□□□□ -1.75
SNF3	YDL194W	GCN2	P15442	1659 aa		4.11	□□□□□ -1.75
SNF3	YDL194W	PHO89	P38361	574 aa		4.1	□□□□□ -1.75
SNF3	YDL194W	KNH1	P50112	268 aa		4.1	□□□□□ -1.75
SNF3	YDL194W	SNX3	Q08826	162 aa	Known RBP	4.1	□□□□□ -1.75
SNF3	YDL194W	PDR12	Q02785	1511 aa		4.1	□□□□□ -1.75
SNF3	YDL194W	EDC2	P40023	145 aa	Predicted RBP	4.1	□□□□□ -1.75
SNF3	YDL194W	VPS25	P47142	202 aa		4.1	□□□□□ -1.75
SNF3	YDL194W	DSK2	P48510	373 aa		4.1	□□□□□ -1.75
SNF3	YDL194W	ANT1	Q06497	328 aa		4.1	□□□□□ -1.75
SNF3	YDL194W	MET32	Q12041	191 aa		4.1	□□□□□ -1.75
SNF3	YDL194W	UTP10	P42945	1769 aa	Known RBP	4.1	□□□□□ -1.75
SNF3	YDL194W	YLR422W	Q06409	1932 aa		4.1	□□□□□ -1.75
SNF3	YDL194W	NTE1	Q04958	1679 aa		4.1	□□□□□ -1.75
SNF3	YDL194W	UBC4	P15731	148 aa		4.09	□□□□□ -1.75
SNF3	YDL194W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
SNF3	YDL194W	YCR085W	P25650	117 aa		4.09	□□□□□ -1.75
SNF3	YDL194W	RPL16A	P26784	199 aa	Known RBP	4.09	□□□□□ -1.75
SNF3	YDL194W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
SNF3	YDL194W	AIM26	P32858	118 aa		4.09	□□□□□ -1.75
SNF3	YDL194W	PHO88	P38264	188 aa	Predicted RBP	4.09	□□□□□ -1.75
SNF3	YDL194W	HTD2	P38790	280 aa	Known RBP	4.09	□□□□□ -1.75
SNF3	YDL194W	NMA1	Q06178	401 aa	Known RBP	4.09	□□□□□ -1.75
SNF3	YDL194W	RPO21	P04050	1733 aa	Known RBP	4.09	□□□□□ -1.75
SNF3	YDL194W	DDR48	P18899	430 aa	Known RBP	4.09	□□□□□ -1.75
SNF3	YDL194W	ERG4	P25340	473 aa		4.09	□□□□□ -1.75
SNF3	YDL194W	ATG8	P38182	117 aa	RIP-Chip data	4.09	□□□□□ -1.75	not detected
SNF3	YDL194W	NSA2	P40078	261 aa	Known RBP	4.09	□□□□□ -1.75
SNF3	YDL194W	CYT2	Q00873	224 aa		4.09	□□□□□ -1.75
SNF3	YDL194W	PAU23	Q07987	124 aa		4.09	□□□□□ -1.75
SNF3	YDL194W	ATO3	Q12359	275 aa		4.09	□□□□□ -1.75
SNF3	YDL194W	PAU17	Q12370	124 aa		4.09	□□□□□ -1.75
SNF3	YDL194W	YRF1-2	P40105	1681 aa		4.09	□□□□□ -1.76
SNF3	YDL194W	RPL23A	P0CX41	137 aa	Known RBP	4.08	□□□□□ -1.76
SNF3	YDL194W	RPL23B	P0CX42	137 aa	Known RBP	4.08	□□□□□ -1.76
SNF3	YDL194W	UTR5	P32630	166 aa		4.08	□□□□□ -1.76
SNF3	YDL194W	SWT21	P53873	357 aa	Predicted RBP	4.08	□□□□□ -1.76
SNF3	YDL194W	MIM1	Q08176	113 aa		4.08	□□□□□ -1.76
SNF3	YDL194W	YLR112W	Q12130	139 aa		4.08	□□□□□ -1.76
SNF3	YDL194W	CCH1	P50077	2039 aa		4.08	□□□□□ -1.76
SNF3	YDL194W	YCR006C	P25350	157 aa		4.08	□□□□□ -1.76
SNF3	YDL194W	FYV4	P38783	130 aa	Predicted RBP	4.08	□□□□□ -1.76
SNF3	YDL194W	YND1	P40009	630 aa		4.08	□□□□□ -1.76
SNF3	YDL194W	TRS23	Q03784	219 aa		4.08	□□□□□ -1.76
SNF3	YDL194W	MIC10	Q96VH5	97 aa		4.08	□□□□□ -1.76
SNF3	YDL194W	RAS2	P01120	322 aa	Known RBP	4.08	□□□□□ -1.76
SNF3	YDL194W	YHR138C	P38841	114 aa	Predicted RBP	4.08	□□□□□ -1.76
SNF3	YDL194W	SMX2	P40204	77 aa	Known RBP	4.08	□□□□□ -1.76
SNF3	YDL194W	YFL019C	P43576	117 aa		4.08	□□□□□ -1.76
SNF3	YDL194W	YDR102C	Q03864	110 aa		4.08	□□□□□ -1.76
SNF3	YDL194W	LPP1	Q04396	274 aa		4.08	□□□□□ -1.76
SNF3	YDL194W	NDD1	Q08887	554 aa		4.08	□□□□□ -1.76
SNF3	YDL194W	NAG1	Q8TGN9	163 aa		4.08	□□□□□ -1.76
SNF3	YDL194W	PDR5	P33302	1511 aa	Known RBP	4.07	□□□□□ -1.76
SNF3	YDL194W	SPO14	P36126	1683 aa		4.07	□□□□□ -1.76
SNF3	YDL194W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.07	□□□□□ -1.76
SNF3	YDL194W	ATX1	P38636	73 aa		4.07	□□□□□ -1.76
SNF3	YDL194W	NMA2	P53204	395 aa		4.07	□□□□□ -1.76
SNF3	YDL194W	YPR145C-A	Q2V2P0	78 aa		4.07	□□□□□ -1.76
SNF3	YDL194W	YCR024C-B	Q3E7Z8	88 aa		4.07	□□□□□ -1.76
SNF3	YDL194W	YAR066W	P0CX18	203 aa		4.07	□□□□□ -1.76
SNF3	YDL194W	YHR214W	P0CX19	203 aa		4.07	□□□□□ -1.76
SNF3	YDL194W	RRT7	Q07829	113 aa		4.07	□□□□□ -1.76
SNF3	YDL194W	JID1	Q12350	301 aa		4.07	□□□□□ -1.76
SNF3	YDL194W	NPC2	Q12408	173 aa		4.07	□□□□□ -1.76
SNF3	YDL194W	POR1	P04840	283 aa	Known RBP	4.06	□□□□□ -1.76
SNF3	YDL194W	MAK31	P23059	88 aa		4.06	□□□□□ -1.76
SNF3	YDL194W	YCR025C	P25352	136 aa		4.06	□□□□□ -1.76
SNF3	YDL194W	YHL018W	P38744	120 aa	Predicted RBP	4.06	□□□□□ -1.76
SNF3	YDL194W	YAL064W	P39711	94 aa		4.06	□□□□□ -1.76
SNF3	YDL194W	YER135C	P40082	130 aa		4.06	□□□□□ -1.76
SNF3	YDL194W	YBL008W-A	Q3E821	79 aa		4.06	□□□□□ -1.76
SNF3	YDL194W	SUS1	Q6WNK7	96 aa		4.06	□□□□□ -1.76
SNF3	YDL194W	RPS13	P05756	151 aa	Known RBP	4.06	□□□□□ -1.76
SNF3	YDL194W	RPS25B	P0C0T4	108 aa	Known RBP	4.06	□□□□□ -1.76
SNF3	YDL194W	HYR1	P40581	163 aa	Known RBP	4.06	□□□□□ -1.76
SNF3	YDL194W	PIN3	Q06449	215 aa		4.06	□□□□□ -1.76
SNF3	YDL194W	RPS25A	Q3E792	108 aa	Predicted RBP	4.06	□□□□□ -1.76
SNF3	YDL194W	ENV10	Q99382	181 aa		4.06	□□□□□ -1.76
SNF3	YDL194W	ZRT3	P34240	503 aa		4.05	□□□□□ -1.76
SNF3	YDL194W	MID2	P36027	376 aa		4.05	□□□□□ -1.76
SNF3	YDL194W	LYS5	P50113	272 aa		4.05	□□□□□ -1.76
SNF3	YDL194W	USV1	Q12132	391 aa		4.05	□□□□□ -1.76
SNF3	YDL194W	POC4	Q12245	148 aa	Predicted RBP	4.05	□□□□□ -1.76
SNF3	YDL194W	PCL9	Q12477	304 aa		4.05	□□□□□ -1.76
SNF3	YDL194W	YML100W-A	Q8TGT0	57 aa		4.05	□□□□□ -1.76
SNF3	YDL194W	YOL162W	P0CF19	215 aa		4.05	□□□□□ -1.76
SNF3	YDL194W	NRG2	P38082	220 aa		4.05	□□□□□ -1.76
SNF3	YDL194W	SPG3	Q04398	127 aa	Predicted RBP	4.05	□□□□□ -1.76
SNF3	YDL194W	DAD1	Q12248	94 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms