RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	YFL065C	P43539	102 aa		2.8	□□□□□ -1.96
RPN5	YDL147W	YGL041W-A	P0C5N3	154 aa		2.79	□□□□□ -1.96
RPN5	YDL147W	DDR48	P18899	430 aa	Known RBP	2.79	□□□□□ -1.96
RPN5	YDL147W	YCL042W	P25572	119 aa		2.79	□□□□□ -1.96
RPN5	YDL147W	AHT1	P29589	182 aa		2.79	□□□□□ -1.96
RPN5	YDL147W	ACP1	P32463	125 aa		2.79	□□□□□ -1.96
RPN5	YDL147W	POP7	P38291	140 aa		2.79	□□□□□ -1.96
RPN5	YDL147W	YGR042W	P53227	271 aa		2.79	□□□□□ -1.96
RPN5	YDL147W	FMN1	Q03778	218 aa		2.79	□□□□□ -1.96
RPN5	YDL147W	RCF2	P53721	224 aa		2.78	□□□□□ -1.96
RPN5	YDL147W	CSN9	Q03981	162 aa		2.78	□□□□□ -1.96
RPN5	YDL147W	NMA1	Q06178	401 aa	Known RBP	2.78	□□□□□ -1.96
RPN5	YDL147W	COA3	Q3E7B2	85 aa		2.78	□□□□□ -1.96
RPN5	YDL147W	SUI1	P32911	108 aa	Known RBP	2.77	□□□□□ -1.97
RPN5	YDL147W	KEI1	Q06346	221 aa		2.77	□□□□□ -1.97
RPN5	YDL147W	TAR1	Q8TGM6	124 aa		2.77	□□□□□ -1.97
RPN5	YDL147W	RIB3	Q99258	208 aa		2.76	□□□□□ -1.97
RPN5	YDL147W	PRE1	P22141	198 aa	Known RBP	2.75	□□□□□ -1.97
RPN5	YDL147W	SHB17	P36136	271 aa	Known RBP	2.75	□□□□□ -1.97
RPN5	YDL147W	PHB1	P40961	287 aa		2.75	□□□□□ -1.97
RPN5	YDL147W	AVO2	Q04749	426 aa		2.75	□□□□□ -1.97
RPN5	YDL147W	SCS22	Q6Q595	175 aa		2.75	□□□□□ -1.97
RPN5	YDL147W	IRC19	Q07843	230 aa		2.74	□□□□□ -1.97
RPN5	YDL147W	SPC3	Q12133	184 aa		2.74	□□□□□ -1.97
RPN5	YDL147W	YBR242W	P38331	238 aa		2.72	□□□□□ -1.97
RPN5	YDL147W	YEL014C	P39999	101 aa		2.72	□□□□□ -1.97
RPN5	YDL147W	SPG1	P50088	95 aa		2.72	□□□□□ -1.97
RPN5	YDL147W	CDC39	P25655	2108 aa	Known RBP	2.71	□□□□□ -1.98
RPN5	YDL147W	SUA7	P29055	345 aa	Predicted RBP	2.7	□□□□□ -1.98
RPN5	YDL147W	MRPL15	P36523	253 aa		2.7	□□□□□ -1.98
RPN5	YDL147W	RIF1	P29539	1916 aa		2.7	□□□□□ -1.98
RPN5	YDL147W	YHR212W-A	P0CX91	67 aa		2.69	□□□□□ -1.98
RPN5	YDL147W	YDR278C	Q05612	105 aa		2.69	□□□□□ -1.98
RPN5	YDL147W	FCY1	Q12178	158 aa		2.69	□□□□□ -1.98
RPN5	YDL147W	ECM31	P38122	312 aa		2.68	□□□□□ -1.98
RPN5	YDL147W	YGL230C	P53074	147 aa		2.68	□□□□□ -1.98
RPN5	YDL147W	FIT1	Q04433	528 aa		2.68	□□□□□ -1.98
RPN5	YDL147W	YLR361C-A	Q3E795	98 aa		2.68	□□□□□ -1.98
RPN5	YDL147W	YHR140W	P38842	239 aa		2.68	□□□□□ -1.98
RPN5	YDL147W	GLC8	P41818	229 aa		2.68	□□□□□ -1.98
RPN5	YDL147W	VMA10	P48836	114 aa	Known RBP	2.68	□□□□□ -1.98
RPN5	YDL147W	YNL019C	P53975	284 aa		2.68	□□□□□ -1.98
RPN5	YDL147W	YPR153W	Q06537	140 aa		2.68	□□□□□ -1.98
RPN5	YDL147W	ATP14	Q12349	124 aa		2.68	□□□□□ -1.98
RPN5	YDL147W	AQY2	P0CD90	149 aa		2.67	□□□□□ -1.98
RPN5	YDL147W	HSP150	P32478	413 aa		2.67	□□□□□ -1.98
RPN5	YDL147W	APS3	P47064	194 aa		2.67	□□□□□ -1.98
RPN5	YDL147W	LSM8	P47093	109 aa	Known RBP	2.67	□□□□□ -1.98
RPN5	YDL147W	DIE2	P50076	525 aa		2.67	□□□□□ -1.98
RPN5	YDL147W	EMC4	P53073	190 aa		2.67	□□□□□ -1.98
RPN5	YDL147W	CMC4	Q3E7A9	73 aa		2.67	□□□□□ -1.98
RPN5	YDL147W	VAR1	P02381	398 aa		2.66	□□□□□ -1.98
RPN5	YDL147W	IPT1	P38954	527 aa		2.65	□□□□□ -1.99
RPN5	YDL147W	RAF1	Q06891	181 aa		2.65	□□□□□ -1.99
RPN5	YDL147W	KIN28	P06242	306 aa		2.64	□□□□□ -1.99
RPN5	YDL147W	PRS3	P38689	320 aa	Known RBP	2.64	□□□□□ -1.99
RPN5	YDL147W	VAM10	Q08474	114 aa		2.64	□□□□□ -1.99
RPN5	YDL147W	YPR203W	Q08994	102 aa		2.64	□□□□□ -1.99
RPN5	YDL147W	YNL277W-A	Q3E7Z0	62 aa		2.64	□□□□□ -1.99
RPN5	YDL147W	DDP1	Q99321	188 aa	Known RBP	2.64	□□□□□ -1.99
RPN5	YDL147W	RPS20	P38701	121 aa	Known RBP	2.63	□□□□□ -1.99
RPN5	YDL147W	GPI11	Q06636	219 aa		2.63	□□□□□ -1.99
RPN5	YDL147W	HUT1	Q12520	339 aa		2.63	□□□□□ -1.99
RPN5	YDL147W	RPS1B	P23248	255 aa	Known RBP	2.62	□□□□□ -1.99
RPN5	YDL147W	HYP2	P23301	157 aa	Known RBP	2.62	□□□□□ -1.99
RPN5	YDL147W	YKR070W	P36151	352 aa	Known RBP	2.62	□□□□□ -1.99
RPN5	YDL147W	NHP6A	P11632	93 aa	Known RBP	2.61	□□□□□ -1.99
RPN5	YDL147W	YHL037C	P38733	133 aa		2.61	□□□□□ -1.99
RPN5	YDL147W	YFL051C	P43552	160 aa		2.61	□□□□□ -1.99
RPN5	YDL147W	YGR017W	P53210	297 aa		2.61	□□□□□ -1.99
RPN5	YDL147W	YCL001W-A	P87012	153 aa		2.61	□□□□□ -1.99
RPN5	YDL147W	DYN2	Q02647	92 aa		2.61	□□□□□ -1.99
RPN5	YDL147W	SOM1	Q05676	74 aa		2.61	□□□□□ -1.99
RPN5	YDL147W	FYV5	P25585	152 aa		2.6	□□□□□ -1.99
RPN5	YDL147W	HPM1	P40481	377 aa		2.6	□□□□□ -1.99
RPN5	YDL147W	CNL1	Q06333	122 aa		2.6	□□□□□ -1.99
RPN5	YDL147W	COX5B	P00425	151 aa		2.59	□□□□□ -2
RPN5	YDL147W	YBR027C	P38220	110 aa		2.59	□□□□□ -2
RPN5	YDL147W	YMR007W	Q03675	126 aa		2.59	□□□□□ -2
RPN5	YDL147W	YOR385W	Q08909	290 aa		2.59	□□□□□ -2
RPN5	YDL147W	FMP49	A0A023PZB3	126 aa		2.58	□□□□□ -2
RPN5	YDL147W	RPL14A	P36105	138 aa	Known RBP	2.58	□□□□□ -2
RPN5	YDL147W	RPL14B	P38754	138 aa	Known RBP	2.58	□□□□□ -2
RPN5	YDL147W	DCV1	P43595	202 aa		2.58	□□□□□ -2
RPN5	YDL147W	ELC1	Q03071	99 aa		2.58	□□□□□ -2
RPN5	YDL147W	MRPL44	P19956	98 aa		2.57	□□□□□ -2
RPN5	YDL147W	TIM8	P57744	87 aa		2.57	□□□□□ -2
RPN5	YDL147W	NAT5	Q08689	176 aa		2.56	□□□□□ -2
RPN5	YDL147W	NKP2	Q06162	153 aa		2.55	□□□□□ -2
RPN5	YDL147W	HFA1	P32874	2273 aa		2.55	□□□□□ -2
RPN5	YDL147W	YCR050C	P25630	102 aa		2.54	□□□□□ -2
RPN5	YDL147W	RPS1A	P33442	255 aa	Known RBP	2.54	□□□□□ -2
RPN5	YDL147W	TMA23	Q03525	211 aa		2.54	□□□□□ -2
RPN5	YDL147W	RAD50	P12753	1312 aa		2.54	□□□□□ -2
RPN5	YDL147W	PHS1	P40857	217 aa		2.53	□□□□□ -2
RPN5	YDL147W	MPC1	P53157	130 aa	Known RBP	2.53	□□□□□ -2
RPN5	YDL147W	Q0144	Q9ZZW2	109 aa		2.53	□□□□□ -2
RPN5	YDL147W	SED1	Q01589	338 aa		2.52	□□□□□ -2.01
RPN5	YDL147W	SLO1	Q3E784	85 aa		2.52	□□□□□ -2.01
RPN5	YDL147W	SRL3	P36167	246 aa		2.51	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms