RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	SME1	Q12330	94 aa	Predicted RBP	4.38	□□□□□ -1.71
ATG12	YBR217W	YBR085C-A	O43137	85 aa		4.37	□□□□□ -1.71
ATG12	YBR217W	RPS0A	P32905	252 aa	Known RBP	4.37	□□□□□ -1.71
ATG12	YBR217W	MBB1	P39534	108 aa		4.37	□□□□□ -1.71
ATG12	YBR217W	SMD3	P43321	101 aa	Known RBP	4.37	□□□□□ -1.71
ATG12	YBR217W	TMA23	Q03525	211 aa		4.37	□□□□□ -1.71
ATG12	YBR217W	YMR244W	Q04018	355 aa		4.37	□□□□□ -1.71
ATG12	YBR217W	FMP16	Q12497	93 aa		4.37	□□□□□ -1.71
ATG12	YBR217W	COX19	Q3E731	98 aa		4.37	□□□□□ -1.71
ATG12	YBR217W	YNL146C-A	Q3E7Z1	64 aa		4.37	□□□□□ -1.71
ATG12	YBR217W	MDN1	Q12019	4910 aa	Known RBP	4.37	□□□□□ -1.71
ATG12	YBR217W	ZRC1	P20107	442 aa		4.36	□□□□□ -1.71
ATG12	YBR217W	MIG3	P39943	394 aa		4.36	□□□□□ -1.71
ATG12	YBR217W	PRE5	P40302	234 aa	Known RBP	4.36	□□□□□ -1.71
ATG12	YBR217W	LOC1	P43586	204 aa	Predicted RBP	4.36	□□□□□ -1.71
ATG12	YBR217W	SNX4	P47057	423 aa		4.36	□□□□□ -1.71
ATG12	YBR217W	TOM7	P53507	60 aa		4.36	□□□□□ -1.71
ATG12	YBR217W	FMP41	P53889	259 aa	Known RBP	4.36	□□□□□ -1.71
ATG12	YBR217W	COX12	Q01519	83 aa		4.36	□□□□□ -1.71
ATG12	YBR217W	MRX11	Q03079	207 aa		4.36	□□□□□ -1.71
ATG12	YBR217W	GEP3	Q08622	556 aa		4.36	□□□□□ -1.71
ATG12	YBR217W	RPB3	P16370	318 aa	Known RBP	4.35	□□□□□ -1.71
ATG12	YBR217W	MLF3	P32047	452 aa		4.35	□□□□□ -1.71
ATG12	YBR217W	MSK1	P32048	576 aa		4.35	□□□□□ -1.71
ATG12	YBR217W	NNK1	P36003	928 aa		4.35	□□□□□ -1.71
ATG12	YBR217W	PAU4	P53427	120 aa		4.35	□□□□□ -1.71
ATG12	YBR217W	LOA1	Q06508	300 aa		4.35	□□□□□ -1.71
ATG12	YBR217W	RDS3	Q06835	107 aa	Predicted RBP	4.35	□□□□□ -1.71
ATG12	YBR217W	TY1A-DR3	Q12441	440 aa		4.35	□□□□□ -1.71
ATG12	YBR217W	YPR145C-A	Q2V2P0	78 aa		4.35	□□□□□ -1.71
ATG12	YBR217W	HTB2	P02294	131 aa		4.34	□□□□□ -1.71
ATG12	YBR217W	RNA15	P25299	296 aa	Predicted RBP	4.34	□□□□□ -1.71
ATG12	YBR217W	ACP1	P32463	125 aa		4.34	□□□□□ -1.71
ATG12	YBR217W	RIB5	P38145	238 aa		4.34	□□□□□ -1.71
ATG12	YBR217W	YIL163C	P40448	117 aa		4.34	□□□□□ -1.71
ATG12	YBR217W	SNN1	P48232	102 aa		4.34	□□□□□ -1.71
ATG12	YBR217W	MRPS8	Q03799	155 aa		4.34	□□□□□ -1.71
ATG12	YBR217W	RAV2	Q03956	351 aa		4.34	□□□□□ -1.71
ATG12	YBR217W	YPL162C	Q12042	273 aa		4.34	□□□□□ -1.71
ATG12	YBR217W	ERV2	Q12284	196 aa		4.34	□□□□□ -1.71
ATG12	YBR217W	MRS1	P07266	363 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	PAU1	P0CE88	120 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	PAU14	P0CE89	120 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	PAU6	P0CE90	120 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	PAU18	P0CE91	120 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	PAU8	P0CE92	120 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	PAU11	P0CE93	120 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	HMX1	P32339	317 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	SHG1	P38337	142 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	PAU13	P38725	120 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	YHR173C	P38864	112 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	VMA7	P39111	118 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	PAU10	Q03050	120 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	PAU20	Q08322	120 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	ATX2	Q12067	313 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	ATP14	Q12349	124 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	PAU9	Q3E770	120 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	YOL085C	Q99345	113 aa		4.33	□□□□□ -1.72
ATG12	YBR217W	MRPL33	P20084	86 aa		4.32	□□□□□ -1.72
ATG12	YBR217W	YHR022C	P38763	256 aa		4.32	□□□□□ -1.72
ATG12	YBR217W	YMR141C	P40211	102 aa		4.32	□□□□□ -1.72
ATG12	YBR217W	YFR035C	P43608	114 aa		4.32	□□□□□ -1.72
ATG12	YBR217W	MCM22	P47167	239 aa		4.32	□□□□□ -1.72
ATG12	YBR217W	UBC12	P52491	188 aa		4.32	□□□□□ -1.72
ATG12	YBR217W	STP4	Q07351	490 aa		4.32	□□□□□ -1.72
ATG12	YBR217W	CCW12	Q12127	133 aa		4.32	□□□□□ -1.72
ATG12	YBR217W	YLR302C	O13544	120 aa		4.31	□□□□□ -1.72
ATG12	YBR217W	RPL31B	P0C2H9	113 aa	Known RBP	4.31	□□□□□ -1.72
ATG12	YBR217W	YPR063C	Q12160	140 aa		4.31	□□□□□ -1.72
ATG12	YBR217W	RPS11A	P0CX47	156 aa	Known RBP	4.3	□□□□□ -1.72
ATG12	YBR217W	RPS11B	P0CX48	156 aa	Known RBP	4.3	□□□□□ -1.72
ATG12	YBR217W	MRPL20	P22354	195 aa	Predicted RBP	4.3	□□□□□ -1.72
ATG12	YBR217W	COQ3	P27680	312 aa		4.3	□□□□□ -1.72
ATG12	YBR217W	YBR090C	P38253	122 aa		4.3	□□□□□ -1.72
ATG12	YBR217W	DAD4	P69851	72 aa		4.3	□□□□□ -1.72
ATG12	YBR217W	VMA9	Q3E7B6	73 aa		4.3	□□□□□ -1.72
ATG12	YBR217W	RPS22A	P0C0W1	130 aa	Known RBP	4.29	□□□□□ -1.72
ATG12	YBR217W	YCR001W	P25347	104 aa		4.29	□□□□□ -1.72
ATG12	YBR217W	SPI1	P40092	148 aa		4.29	□□□□□ -1.72
ATG12	YBR217W	HIT1	P46973	164 aa		4.29	□□□□□ -1.72
ATG12	YBR217W	RPL2A	P0CX45	254 aa	Known RBP	4.28	□□□□□ -1.72
ATG12	YBR217W	RPL2B	P0CX46	254 aa	Known RBP	4.28	□□□□□ -1.72
ATG12	YBR217W	CPT1	P17898	393 aa		4.28	□□□□□ -1.72
ATG12	YBR217W	AFR1	P33304	620 aa		4.28	□□□□□ -1.72
ATG12	YBR217W	AME1	P38313	324 aa		4.28	□□□□□ -1.72
ATG12	YBR217W	CYB5	P40312	120 aa		4.28	□□□□□ -1.72
ATG12	YBR217W	YJR096W	P47137	282 aa		4.28	□□□□□ -1.72
ATG12	YBR217W	Q0142	Q9ZZW4	58 aa		4.28	□□□□□ -1.72
ATG12	YBR217W	CYC7	P00045	113 aa		4.27	□□□□□ -1.73
ATG12	YBR217W	FZF1	P32805	299 aa		4.27	□□□□□ -1.73
ATG12	YBR217W	YPT10	P38146	199 aa		4.27	□□□□□ -1.73
ATG12	YBR217W	YMR253C	Q04835	414 aa		4.27	□□□□□ -1.73
ATG12	YBR217W	DAD1	Q12248	94 aa		4.27	□□□□□ -1.73
ATG12	YBR217W	PCC1	Q3E833	88 aa		4.27	□□□□□ -1.73
ATG12	YBR217W	VAR1	P02381	398 aa		4.26	□□□□□ -1.73
ATG12	YBR217W	Q0255	P03881	472 aa		4.26	□□□□□ -1.73
ATG12	YBR217W	ECM25	P32525	599 aa		4.26	□□□□□ -1.73
ATG12	YBR217W	SRB6	P32570	121 aa		4.26	□□□□□ -1.73
ATG12	YBR217W	POG1	P40473	351 aa		4.26	□□□□□ -1.73
ATG12	YBR217W	DAD3	P69850	94 aa		4.26	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms