RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W SMT3Q12306 101 aaKnown RBP2.75□□□□□ -1.97
NUP60YAR002W DCN1Q12395 269 aa2.75□□□□□ -1.97
NUP60YAR002W HSP12P22943 109 aaKnown RBP2.74□□□□□ -1.97
NUP60YAR002W YCR022CP25620 114 aa2.74□□□□□ -1.97
NUP60YAR002W SRP21P32342 167 aa2.74□□□□□ -1.97
NUP60YAR002W PHD1P36093 366 aa2.74□□□□□ -1.97
NUP60YAR002W YKR045CP36138 183 aa2.74□□□□□ -1.97
NUP60YAR002W ICS2P38284 255 aa2.74□□□□□ -1.97
NUP60YAR002W SRP14P38985 146 aa2.74□□□□□ -1.97
NUP60YAR002W IRC22P40006 225 aa2.74□□□□□ -1.97
NUP60YAR002W SBH2P52871 88 aa2.74□□□□□ -1.97
NUP60YAR002W YIP1P53039 248 aa2.74□□□□□ -1.97
NUP60YAR002W YGR018CP53211 109 aa2.74□□□□□ -1.97
NUP60YAR002W NDE2Q07500 545 aa2.74□□□□□ -1.97
NUP60YAR002W YOR105WQ08504 108 aa2.74□□□□□ -1.97
NUP60YAR002W ATO3Q12359 275 aa2.74□□□□□ -1.97
NUP60YAR002W GEP5Q12393 293 aa2.74□□□□□ -1.97
NUP60YAR002W TOR1P35169 2470 aa2.73□□□□□ -1.97
NUP60YAR002W ILV5P06168 395 aaKnown RBP2.73□□□□□ -1.97
NUP60YAR002W SUA7P29055 345 aaPredicted RBP2.73□□□□□ -1.97
NUP60YAR002W YKL075CP36083 450 aa2.73□□□□□ -1.97
NUP60YAR002W DAD2P36162 133 aa2.73□□□□□ -1.97
NUP60YAR002W DOG2P38773 246 aa2.73□□□□□ -1.97
NUP60YAR002W DOG1P38774 246 aa2.73□□□□□ -1.97
NUP60YAR002W YHR173CP38864 112 aa2.73□□□□□ -1.97
NUP60YAR002W GAT2P40209 560 aa2.73□□□□□ -1.97
NUP60YAR002W YJL213WP40896 331 aa2.73□□□□□ -1.97
NUP60YAR002W YGR149WP48236 432 aa2.73□□□□□ -1.97
NUP60YAR002W CPD1P53314 239 aa2.73□□□□□ -1.97
NUP60YAR002W YNL234WP53857 426 aa2.73□□□□□ -1.97
NUP60YAR002W CUE4Q04201 117 aaPredicted RBP2.73□□□□□ -1.97
NUP60YAR002W SDH7Q04401 133 aa2.73□□□□□ -1.97
NUP60YAR002W FIT2Q08906 153 aa2.73□□□□□ -1.97
NUP60YAR002W PRP8P33334 2413 aaKnown RBP2.73□□□□□ -1.97
NUP60YAR002W POR1P04840 283 aaKnown RBP2.72□□□□□ -1.97
NUP60YAR002W SFT2P38166 215 aa2.72□□□□□ -1.97
NUP60YAR002W YBR090CP38253 122 aa2.72□□□□□ -1.97
NUP60YAR002W LSM4P40070 187 aaKnown RBP2.72□□□□□ -1.97
NUP60YAR002W NCA3P46955 337 aa2.72□□□□□ -1.97
NUP60YAR002W HST4P53688 370 aa2.72□□□□□ -1.97
NUP60YAR002W OCA2P53949 197 aa2.72□□□□□ -1.97
NUP60YAR002W ATP19P81451 68 aa2.72□□□□□ -1.97
NUP60YAR002W MRX11Q03079 207 aa2.72□□□□□ -1.97
NUP60YAR002W RAV2Q03956 351 aa2.72□□□□□ -1.97
NUP60YAR002W SEN15Q04675 128 aa2.72□□□□□ -1.97
NUP60YAR002W ADH6Q04894 360 aaKnown RBP2.72□□□□□ -1.97
NUP60YAR002W TMC1Q08422 150 aaPredicted RBP2.72□□□□□ -1.97
NUP60YAR002W JID1Q12350 301 aa2.72□□□□□ -1.97
NUP60YAR002W LSO2Q3E772 92 aaKnown RBP2.72□□□□□ -1.97
NUP60YAR002W YNR034W-AQ3E841 98 aa2.72□□□□□ -1.97
NUP60YAR002W QRI5P32344 111 aa2.71□□□□□ -1.97
NUP60YAR002W RRT1P38192 103 aa2.71□□□□□ -1.97
NUP60YAR002W LSM2P38203 95 aaKnown RBP2.71□□□□□ -1.97
NUP60YAR002W YHL044WP38727 235 aa2.71□□□□□ -1.97
NUP60YAR002W YIR020CP40575 100 aa2.71□□□□□ -1.97
NUP60YAR002W OST3P48439 350 aa2.71□□□□□ -1.97
NUP60YAR002W ERV14P53173 138 aa2.71□□□□□ -1.97
NUP60YAR002W TIM10P87108 93 aa2.71□□□□□ -1.97
NUP60YAR002W ATX2Q12067 313 aa2.71□□□□□ -1.97
NUP60YAR002W FCY1Q12178 158 aa2.71□□□□□ -1.97
NUP60YAR002W AYT1Q12226 474 aa2.71□□□□□ -1.97
NUP60YAR002W COA6Q3E846 104 aa2.71□□□□□ -1.97
NUP60YAR002W COX2P00410 251 aa2.71□□□□□ -1.98
NUP60YAR002W MRS1P07266 363 aa2.71□□□□□ -1.98
NUP60YAR002W HMRA1P0CY11 126 aa2.71□□□□□ -1.98
NUP60YAR002W TIR1P10863 254 aa2.71□□□□□ -1.98
NUP60YAR002W CUP2P15315 225 aa2.71□□□□□ -1.98
NUP60YAR002W PAM17P36147 197 aa2.71□□□□□ -1.98
NUP60YAR002W MIX23P38162 196 aa2.71□□□□□ -1.98
NUP60YAR002W RPB11P38902 120 aa2.71□□□□□ -1.98
NUP60YAR002W HUA1P40325 198 aa2.71□□□□□ -1.98
NUP60YAR002W TOM7P53507 60 aa2.71□□□□□ -1.98
NUP60YAR002W CSI2Q08054 341 aa2.71□□□□□ -1.98
NUP60YAR002W YIL134C-AQ45U18 67 aa2.71□□□□□ -1.98
NUP60YAR002W YCL001W-BQ96VH2 84 aa2.71□□□□□ -1.98
NUP60YAR002W MEC1P38111 2368 aa2.7□□□□□ -1.98
NUP60YAR002W YER145C-AA0A023PYF4 145 aa2.7□□□□□ -1.98
NUP60YAR002W DDI2P0CH63 225 aa2.7□□□□□ -1.98
NUP60YAR002W DDI3P0CH64 225 aa2.7□□□□□ -1.98
NUP60YAR002W YHR213WP0CI67 198 aa2.7□□□□□ -1.98
NUP60YAR002W YER190C-BP0CX94 160 aa2.7□□□□□ -1.98
NUP60YAR002W YEL077W-AP0CX95 160 aa2.7□□□□□ -1.98
NUP60YAR002W YGR296C-BP0CX96 160 aa2.7□□□□□ -1.98
NUP60YAR002W YPL283W-BP0CX97 160 aa2.7□□□□□ -1.98
NUP60YAR002W YPR204C-AP0CX98 160 aa2.7□□□□□ -1.98
NUP60YAR002W PHO85P17157 305 aa2.7□□□□□ -1.98
NUP60YAR002W YPS1P32329 569 aa2.7□□□□□ -1.98
NUP60YAR002W MRPL38P35996 138 aaPredicted RBP2.7□□□□□ -1.98
NUP60YAR002W MRPL11P36521 249 aaPredicted RBP2.7□□□□□ -1.98
NUP60YAR002W UIP3P39547 235 aa2.7□□□□□ -1.98
NUP60YAR002W YIL012WP40551 113 aa2.7□□□□□ -1.98
NUP60YAR002W IMP2P46972 177 aa2.7□□□□□ -1.98
NUP60YAR002W YMR166CQ03829 368 aa2.7□□□□□ -1.98
NUP60YAR002W GIM5Q04493 163 aa2.7□□□□□ -1.98
NUP60YAR002W PBP4Q07362 185 aaKnown RBP2.7□□□□□ -1.98
NUP60YAR002W IRC23Q08416 157 aa2.7□□□□□ -1.98
NUP60YAR002W SPO24Q3E752 67 aa2.7□□□□□ -1.98
NUP60YAR002W RPS22BQ3E7Y3 130 aaKnown RBP2.7□□□□□ -1.98
NUP60YAR002W SCM4P32564 187 aa2.69□□□□□ -1.98
NUP60YAR002W TIR2P33890 251 aa2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms