RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 YGR018CP53211 109 aa7.13□□□□□ -1.27
LSR1LSR1 TMA7Q3E764 64 aaKnown RBP7.13□□□□□ -1.27
LSR1LSR1 CUP2P15315 225 aa7.12□□□□□ -1.27
LSR1LSR1 PRE1P22141 198 aaKnown RBP7.12□□□□□ -1.27
LSR1LSR1 RPI1P23250 407 aaKnown RBP7.12□□□□□ -1.27
LSR1LSR1 MRP49P32388 137 aa7.12□□□□□ -1.27
LSR1LSR1 AIM29P36154 155 aa7.12□□□□□ -1.27
LSR1LSR1 MIC26P50087 233 aa7.12□□□□□ -1.27
LSR1LSR1 CRZ1P53968 678 aa7.12□□□□□ -1.27
LSR1LSR1 RAV2Q03956 351 aa7.12□□□□□ -1.27
LSR1LSR1 GIM5Q04493 163 aa7.12□□□□□ -1.27
LSR1LSR1 FIT2Q08906 153 aa7.12□□□□□ -1.27
LSR1LSR1 IRA1P18963 3092 aa7.12□□□□□ -1.27
LSR1LSR1 ADE8P04161 214 aa7.11□□□□□ -1.27
LSR1LSR1 YCR022CP25620 114 aa7.11□□□□□ -1.27
LSR1LSR1 FEN2P25621 512 aaKnown RBP7.11□□□□□ -1.27
LSR1LSR1 CSH1P38287 376 aa7.11□□□□□ -1.27
LSR1LSR1 YBR220CP38318 560 aa7.11□□□□□ -1.27
LSR1LSR1 HAC1P41546 238 aa7.11□□□□□ -1.27
LSR1LSR1 YJL028WP47062 111 aa7.11□□□□□ -1.27
LSR1LSR1 YDL183CP48569 320 aa7.11□□□□□ -1.27
LSR1LSR1 YML079WQ03629 201 aa7.11□□□□□ -1.27
LSR1LSR1 CSI2Q08054 341 aa7.11□□□□□ -1.27
LSR1LSR1 YLR050CQ12155 161 aaKnown RBP7.11□□□□□ -1.27
LSR1LSR1 YLR302CO13544 120 aa7.1□□□□□ -1.27
LSR1LSR1 MTR2P34232 184 aaKnown RBP7.1□□□□□ -1.27
LSR1LSR1 SOR1P35497 357 aaKnown RBP7.1□□□□□ -1.27
LSR1LSR1 MSL1P40567 111 aaPredicted RBP7.1□□□□□ -1.27
LSR1LSR1 COX16P47081 118 aa7.1□□□□□ -1.27
LSR1LSR1 BNA2P47125 453 aa7.1□□□□□ -1.27
LSR1LSR1 YGL230CP53074 147 aa7.1□□□□□ -1.27
LSR1LSR1 COX18P53239 316 aa7.1□□□□□ -1.27
LSR1LSR1 SED1Q01589 338 aa7.1□□□□□ -1.27
LSR1LSR1 SOR2Q07786 357 aa7.1□□□□□ -1.27
LSR1LSR1 MSL5Q12186 476 aaKnown RBP RIP-Chip data7.1□□□□□ -1.27not detected
LSR1LSR1 ZRT1P32804 376 aa7.09□□□□□ -1.27
LSR1LSR1 GSP1P32835 219 aaKnown RBP7.09□□□□□ -1.27
LSR1LSR1 GSP2P32836 220 aaKnown RBP7.09□□□□□ -1.27
LSR1LSR1 RPF1P38805 295 aaKnown RBP7.09□□□□□ -1.27
LSR1LSR1 HUA1P40325 198 aa7.09□□□□□ -1.27
LSR1LSR1 LST8P41318 303 aa7.09□□□□□ -1.27
LSR1LSR1 TDA4P47153 279 aa7.09□□□□□ -1.27
LSR1LSR1 TOR2P32600 2474 aaKnown RBP7.08□□□□□ -1.28
LSR1LSR1 COX2P00410 251 aa7.08□□□□□ -1.28
LSR1LSR1 CYC3P06182 269 aa7.08□□□□□ -1.28
LSR1LSR1 ANB1P19211 157 aa7.08□□□□□ -1.28
LSR1LSR1 MIG1P27705 504 aa7.08□□□□□ -1.28
LSR1LSR1 YKR045CP36138 183 aa7.08□□□□□ -1.28
LSR1LSR1 PRS4P38063 326 aaPredicted RBP7.08□□□□□ -1.28
LSR1LSR1 YBL071CP38185 102 aa7.08□□□□□ -1.28
LSR1LSR1 LSM2P38203 95 aaKnown RBP7.08□□□□□ -1.28
LSR1LSR1 POP7P38291 140 aa7.08□□□□□ -1.28
LSR1LSR1 YGP1P38616 354 aaKnown RBP7.08□□□□□ -1.28
LSR1LSR1 DOG2P38773 246 aa7.08□□□□□ -1.28
LSR1LSR1 CTR2P38865 189 aa7.08□□□□□ -1.28
LSR1LSR1 CIN5P40917 295 aa7.08□□□□□ -1.28
LSR1LSR1 TOM7P53507 60 aa7.08□□□□□ -1.28
LSR1LSR1 MRX11Q03079 207 aa7.08□□□□□ -1.28
LSR1LSR1 RUB1Q03919 77 aa7.08□□□□□ -1.28
LSR1LSR1 CSM4Q08955 156 aa7.08□□□□□ -1.28
LSR1LSR1 RKI1Q12189 258 aa7.08□□□□□ -1.28
LSR1LSR1 HTL1Q9URQ5 78 aa7.08□□□□□ -1.28
LSR1LSR1 SEC4P07560 215 aaKnown RBP7.07□□□□□ -1.28
LSR1LSR1 YPR170W-BP0C5R9 85 aa7.07□□□□□ -1.28
LSR1LSR1 MDM10P18409 493 aa7.07□□□□□ -1.28
LSR1LSR1 FZF1P32805 299 aa7.07□□□□□ -1.28
LSR1LSR1 ALG14P38242 237 aa7.07□□□□□ -1.28
LSR1LSR1 PAU7P39545 55 aa7.07□□□□□ -1.28
LSR1LSR1 AGE2P40529 298 aa7.07□□□□□ -1.28
LSR1LSR1 YJL213WP40896 331 aa7.07□□□□□ -1.28
LSR1LSR1 GZF3P42944 551 aaKnown RBP7.07□□□□□ -1.28
LSR1LSR1 YNR071CP53757 342 aa7.07□□□□□ -1.28
LSR1LSR1 UPS3Q04006 179 aa7.07□□□□□ -1.28
LSR1LSR1 GRH1Q04410 372 aaKnown RBP7.07□□□□□ -1.28
LSR1LSR1 YFL068WP0CX99 160 aa7.06□□□□□ -1.28
LSR1LSR1 YLL066W-AP0CY00 160 aa7.06□□□□□ -1.28
LSR1LSR1 YLL067W-AP0CY01 160 aa7.06□□□□□ -1.28
LSR1LSR1 SEC11P15367 167 aa7.06□□□□□ -1.28
LSR1LSR1 DAL80P26343 269 aa7.06□□□□□ -1.28
LSR1LSR1 ADH5P38113 351 aaKnown RBP7.06□□□□□ -1.28
LSR1LSR1 YPT10P38146 199 aa7.06□□□□□ -1.28
LSR1LSR1 SFT2P38166 215 aa7.06□□□□□ -1.28
LSR1LSR1 YNL046WP53956 172 aa7.06□□□□□ -1.28
LSR1LSR1 YLR363W-AQ3E747 85 aa7.06□□□□□ -1.28
LSR1LSR1 HST4P53688 370 aa7.05□□□□□ -1.28
LSR1LSR1 MIX17Q03667 156 aa7.05□□□□□ -1.28
LSR1LSR1 ATG33Q06485 197 aa7.05□□□□□ -1.28
LSR1LSR1 AYT1Q12226 474 aa7.05□□□□□ -1.28
LSR1LSR1 MRS1P07266 363 aa7.04□□□□□ -1.28
LSR1LSR1 RPL12AP0CX53 165 aaKnown RBP7.04□□□□□ -1.28
LSR1LSR1 RPL12BP0CX54 165 aa7.04□□□□□ -1.28
LSR1LSR1 SOH1P38633 127 aa7.04□□□□□ -1.28
LSR1LSR1 GPP2P40106 250 aaKnown RBP7.04□□□□□ -1.28
LSR1LSR1 BRP1P53194 125 aa7.04□□□□□ -1.28
LSR1LSR1 SDH7Q04401 133 aa7.04□□□□□ -1.28
LSR1LSR1 WIP1Q2V2P8 89 aa7.04□□□□□ -1.28
LSR1LSR1 ADH2P00331 348 aaKnown RBP7.03□□□□□ -1.28
LSR1LSR1 SDS23P53172 527 aa7.03□□□□□ -1.28
LSR1LSR1 SNA4Q07549 140 aa7.03□□□□□ -1.28
LSR1LSR1 YDL218WQ07629 317 aa7.03□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms