RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 hCG_1818297A0A087WSY0 165 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 ADCY6O43306 1168 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 TRAPPC3O43617 180 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 CILPO75339 1184 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 MICAL2O94851 1124 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 PAEPP09466 180 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 CETPP11597 493 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 KRT3P12035 628 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 TAP1Q03518 808 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 PTPN11Q06124 597 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-229ENST00000641891 AUHQ13825 339 aaKnown RBP17.9■□□□□ 0.46
PHGDH-229ENST00000641891 TMEM132DQ14C87 1099 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 GRIK4Q16099 956 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 C6orf118Q5T5N4 469 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 LRRC38Q5VT99 294 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 DPH6Q7L8W6 267 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 NIPA2Q8N8Q9 360 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 HPDLQ96IR7 371 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 METTL5Q9NRN9 209 aaKnown RBP17.9■□□□□ 0.46
PHGDH-229ENST00000641891 FAM107AO95990 144 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 IL1R2P27930 398 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 CETN2P41208 172 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 CDKN2BP42772 138 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 CORO7P57737 925 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 PDE4CQ08493 712 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 TMEM62Q0P6H9 643 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 KYNUQ16719 465 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 GPR142Q7Z601 462 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 DPP9Q86TI2 863 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 XYLT1Q86Y38 959 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 TMEM176AQ96HP8 235 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 STRIP2Q9ULQ0 834 aa17.9■□□□□ 0.46
PHGDH-229ENST00000641891 COL1A2P08123 1366 aa17.89■□□□□ 0.46
PHGDH-229ENST00000641891 GMNCA6NCL1 334 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 SIGLEC16A6NMB1 481 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 M0QYV0 167 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 TJP3O95049 919 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 MMP3P08254 477 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 SLC25A11Q02978 314 aaKnown RBP17.89■□□□□ 0.45
PHGDH-229ENST00000641891 QPCTQ16769 361 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 P3H1Q32P28 736 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 KCNT1Q5JUK3 1230 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 CCDC89Q8N998 374 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 ASB7Q9H672 318 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 SYNCQ9H7C4 482 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 NINJ2Q9NZG7 142 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 ZNF148Q9UQR1 794 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 C3orf70A6NLC5 250 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-229ENST00000641891 PIK3R2O00459 728 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 LRCH4O75427 683 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 AGTP01019 485 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 CHN1P15882 459 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 MMP13P45452 471 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 TFDP3Q5H9I0 405 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 OR6J1Q8NGC5 347 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 UBA3Q8TBC4 463 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 MAML3Q96JK9 1138 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 CNOT10Q9H9A5 744 aaKnown RBP17.89■□□□□ 0.45
PHGDH-229ENST00000641891 CTNNAL1Q9UBT7 734 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.89■□□□□ 0.45
PHGDH-229ENST00000641891 GINS2Q9Y248 185 aa17.89■□□□□ 0.45
PHGDH-229ENST00000641891 FOXO6A8MYZ6 492 aa17.88■□□□□ 0.45
PHGDH-229ENST00000641891 TTC4O95801 387 aa17.88■□□□□ 0.45
PHGDH-229ENST00000641891 CYP3A5P20815 502 aa17.88■□□□□ 0.45
PHGDH-229ENST00000641891 GTF2A2P52657 109 aa17.88■□□□□ 0.45
PHGDH-229ENST00000641891 DYNLT1P63172 113 aa17.88■□□□□ 0.45
PHGDH-229ENST00000641891 CAV1Q03135 178 aa17.88■□□□□ 0.45
PHGDH-229ENST00000641891 KIZQ2M2Z5 673 aa17.88■□□□□ 0.45
PHGDH-229ENST00000641891 TNFAIP8L3Q5GJ75 292 aa17.88■□□□□ 0.45
PHGDH-229ENST00000641891 HEXIM2Q96MH2 286 aaKnown RBP17.88■□□□□ 0.45
PHGDH-229ENST00000641891 DPP3Q9NY33 737 aa17.88■□□□□ 0.45
PHGDH-229ENST00000641891 SAE1Q9UBE0 346 aaPredicted RBP17.88■□□□□ 0.45
PHGDH-229ENST00000641891 MORF4L1Q9UBU8 362 aa17.88■□□□□ 0.45
PHGDH-229ENST00000641891 SRRM3A6NNA2 597 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-229ENST00000641891 STRNO43815 780 aa17.87■□□□□ 0.45
PHGDH-229ENST00000641891 ATICP31939 592 aa17.87■□□□□ 0.45
PHGDH-229ENST00000641891 HIBCHQ6NVY1 386 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-229ENST00000641891 ZNF467Q7Z7K2 595 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-229ENST00000641891 NPLOC4Q8TAT6 608 aa17.87■□□□□ 0.45
PHGDH-229ENST00000641891 KIF12Q96FN5 646 aa17.87■□□□□ 0.45
PHGDH-229ENST00000641891 ACAP3Q96P50 834 aa17.87■□□□□ 0.45
PHGDH-229ENST00000641891 C10orf88Q9H8K7 445 aa17.87■□□□□ 0.45
PHGDH-229ENST00000641891 VRTNQ9H8Y1 702 aa17.87■□□□□ 0.45
PHGDH-229ENST00000641891 SETD4Q9NVD3 440 aa17.87■□□□□ 0.45
PHGDH-229ENST00000641891 DDX56Q9NY93 547 aaKnown RBP17.87■□□□□ 0.45
PHGDH-229ENST00000641891 A0A1B0GUA9 196 aa17.87■□□□□ 0.45
PHGDH-229ENST00000641891 PTPN7P35236 360 aa17.87■□□□□ 0.45
PHGDH-229ENST00000641891 NDST1P52848 882 aa17.87■□□□□ 0.45
PHGDH-229ENST00000641891 COPS2P61201 443 aa17.87■□□□□ 0.45
PHGDH-229ENST00000641891 IRX5P78411 483 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-229ENST00000641891 GRB14Q14449 540 aa17.87■□□□□ 0.45
PHGDH-229ENST00000641891 DUSP28Q4G0W2 176 aa17.87■□□□□ 0.45
PHGDH-229ENST00000641891 ALLCQ8N6M5 410 aa17.87■□□□□ 0.45
PHGDH-229ENST00000641891 IPO4Q8TEX9 1081 aaKnown RBP17.87■□□□□ 0.45
PHGDH-229ENST00000641891 C9orf72Q96LT7 481 aa17.87■□□□□ 0.45
PHGDH-229ENST00000641891 XPO6Q96QU8 1125 aaKnown RBP17.87■□□□□ 0.45
PHGDH-229ENST00000641891 FAM49AQ9H0Q0 323 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-229ENST00000641891 PCSK1NQ9UHG2 260 aa17.87■□□□□ 0.45
PHGDH-229ENST00000641891 NPTXRO95502 500 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 CD48P09326 243 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms