RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	SGO2	Q562F6	1265 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	C17orf53	Q8N3J3	647 aa	Predicted RBP	18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	PKMYT1	Q99640	499 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	SPG21	Q9NZD8	308 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	NAGPA	Q9UK23	515 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	TFR2	Q9UP52	801 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	ADGRG1	Q9Y653	693 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	PLXNA4	Q9HCM2	1894 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	ARHGEF37	A1IGU5	675 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	MYBPHL	A2RUH7	354 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	ANXA13	P27216	316 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	ELAVL2	Q12926	359 aa	Known RBP	18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	LRRTM3	Q86VH5	581 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	CYFIP2	Q96F07	1278 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	TMEM169	Q96HH4	297 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	TNIP3	Q96KP6	325 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	ACBD6	Q9BR61	282 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	MDH1B	Q5I0G3	518 aa		18.85	■□□□□ 0.61
SPIN3-238	ENST00000640421	DENND1B	Q6P3S1	775 aa		18.85	■□□□□ 0.61
SPIN3-238	ENST00000640421	RSPO2	Q6UXX9	243 aa	Predicted RBP	18.85	■□□□□ 0.61
SPIN3-238	ENST00000640421	C17orf80	Q9BSJ5	609 aa		18.85	■□□□□ 0.61
SPIN3-238	ENST00000640421	TTPAL	Q9BTX7	342 aa		18.85	■□□□□ 0.61
SPIN3-238	ENST00000640421	CHST7	Q9NS84	486 aa		18.85	■□□□□ 0.61
SPIN3-238	ENST00000640421	TMLHE	Q9NVH6	421 aa		18.85	■□□□□ 0.61
SPIN3-238	ENST00000640421	GTF3C4	Q9UKN8	822 aa		18.85	■□□□□ 0.61
SPIN3-238	ENST00000640421	TSPAN16	Q9UKR8	245 aa		18.85	■□□□□ 0.61
SPIN3-238	ENST00000640421	CDH9	Q9ULB4	789 aa		18.85	■□□□□ 0.61
SPIN3-238	ENST00000640421	PCDHGC3	Q9UN70	934 aa		18.85	■□□□□ 0.61
SPIN3-238	ENST00000640421	PCDHB12	Q9Y5F1	795 aa		18.85	■□□□□ 0.61
SPIN3-238	ENST00000640421	TMCO5B	A8MYB1	307 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	FGF18	O76093	207 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	MICAL2	O94851	1124 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	CYP1A1	P04798	512 aa	Predicted RBP	18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	CA3	P07451	260 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	OR4Q2	P0C623	313 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	UNG	P13051	313 aa	Predicted RBP	18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	PCSK1	P29120	753 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	PBX2	P40425	430 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	CNGA2	Q16280	664 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	CLEC16A	Q2KHT3	1053 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	INTS6L	Q5JSJ4	861 aa	Known RBP	18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	ALKBH5	Q6P6C2	394 aa	Known RBP	18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	PRSS55	Q6UWB4	352 aa	Predicted RBP	18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	PAQR9	Q6ZVX9	377 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	VPS36	Q86VN1	386 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	TTC30A	Q86WT1	665 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	FUK	Q8N0W3	1084 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	WDTC1	Q8N5D0	677 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	KLHL23	Q8NBE8	558 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	KIAA1524	Q8TCG1	905 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	SLC2A14	Q8TDB8	520 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	PACSIN1	Q9BY11	444 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	CYTH4	Q9UIA0	394 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	KIAA1257	Q9ULG3	409 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	YBX2	Q9Y2T7	364 aa	Known RBP	18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	RCCD1	A6NED2	376 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	USP27X	A6NNY8	438 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	CLDN5	O00501	218 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	TBC1D4	O60343	1298 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	CAPN15	O75808	1086 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	SOD2	P04179	222 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	PPM1A	P35813	382 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	NOMO3	P69849	1222 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	GOLGA7B	Q2TAP0	167 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	USP41	Q3LFD5	358 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	CCDC122	Q5T0U0	273 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	ARHGAP17	Q68EM7	881 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	FAM171B	Q6P995	826 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	LCLAT1	Q6UWP7	414 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	DDX53	Q86TM3	631 aa	Known RBP	18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	AAAS	Q9NRG9	546 aa		18.84	■□□□□ 0.61
SPIN3-238	ENST00000640421	ADORA2B	P29275	332 aa		18.83	■□□□□ 0.6
SPIN3-238	ENST00000640421	BMPR1A	P36894	532 aa		18.83	■□□□□ 0.6
SPIN3-238	ENST00000640421	THEM5	Q8N1Q8	247 aa		18.83	■□□□□ 0.6
SPIN3-238	ENST00000640421	UBA3	Q8TBC4	463 aa		18.83	■□□□□ 0.6
SPIN3-238	ENST00000640421	CPA5	Q8WXQ8	436 aa		18.83	■□□□□ 0.6
SPIN3-238	ENST00000640421	PCED1B	Q96HM7	432 aa		18.83	■□□□□ 0.6
SPIN3-238	ENST00000640421	B3GNT5	Q9BYG0	378 aa		18.83	■□□□□ 0.6
SPIN3-238	ENST00000640421	PPP2R2C	Q9Y2T4	447 aa		18.83	■□□□□ 0.6
SPIN3-238	ENST00000640421	PCDHA13	Q9Y5I0	950 aa		18.83	■□□□□ 0.6
SPIN3-238	ENST00000640421		M0QYV0	167 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	MED7	O43513	233 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	ABL1	P00519	1130 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	CTNNB1	P35222	781 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	CTXN3	Q4LDR2	81 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	PKDCC	Q504Y2	493 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	NAA35	Q5VZE5	725 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	C1orf131	Q8NDD1	294 aa	Known RBP	18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	MYCBPAP	Q8TBZ2	947 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	RIN2	Q8WYP3	895 aa	Predicted RBP	18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	MYLPF	Q96A32	169 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	HERC2P3	Q9BVR0	1158 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	RHOBTB2	Q9BYZ6	727 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	ZCWPW1	Q9H0M4	648 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	PDCL3	Q9H2J4	239 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	TMEM30A	Q9NV96	361 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	MTUS1	Q9ULD2	1270 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	PTPRD	P23468	1912 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms