RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 RNF19AQ9NV58 838 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 IP6K2Q9UHH9 426 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 SEPT4O43236 478 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 CALB1P05937 261 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 BRD2P25440 801 aaKnown RBP15.96■□□□□ 0.15
TRIM3-215ENST00000639856 POLR2BP30876 1174 aaKnown RBP15.96■□□□□ 0.15
TRIM3-215ENST00000639856 SP3Q02447 781 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 CALCOCO2Q13137 446 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 KLF1Q13351 362 aaPredicted RBP15.96■□□□□ 0.15
TRIM3-215ENST00000639856 SNX1Q13596 522 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 SLMAPQ14BN4 828 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 KYAT1Q16773 422 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 NBPF20Q3BBV1 942 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 WDR72Q3MJ13 1102 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 DCAF4L1Q3SXM0 396 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 NOTUMQ6P988 496 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 SLC27A1Q6PCB7 646 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 SYDE1Q6ZW31 735 aaPredicted RBP15.96■□□□□ 0.15
TRIM3-215ENST00000639856 SRLQ86TD4 932 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 HOOK3Q86VS8 718 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 CCDC50Q8IVM0 306 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 TMEM35BQ8NCS4 154 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 MTG1Q9BT17 334 aaPredicted RBP15.96■□□□□ 0.15
TRIM3-215ENST00000639856 DCLK3Q9C098 648 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 ZNF518BQ9C0D4 1074 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 NXF3Q9H4D5 531 aaKnown RBP15.96■□□□□ 0.15
TRIM3-215ENST00000639856 HOMER3Q9NSC5 361 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 WHRNQ9P202 907 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 FEZ2Q9UHY8 353 aaPredicted RBP15.96■□□□□ 0.15
TRIM3-215ENST00000639856 NOVA2Q9UNW9 492 aaKnown RBP15.96■□□□□ 0.15
TRIM3-215ENST00000639856 PIN4Q9Y237 131 aaKnown RBP15.96■□□□□ 0.15
TRIM3-215ENST00000639856 CEP350Q5VT06 3117 aa15.96■□□□□ 0.15
TRIM3-215ENST00000639856 RALGAPA2Q2PPJ7 1873 aa15.96■□□□□ 0.14
TRIM3-215ENST00000639856 SHBGP04278 402 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 RALAP11233 206 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 PRKAR2AP13861 404 aaKnown RBP15.95■□□□□ 0.14
TRIM3-215ENST00000639856 CDH8P55286 799 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 EXD1Q8NHP7 514 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 GRK7Q8WTQ7 553 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 ATG4AQ8WYN0 398 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 KIF12Q96FN5 646 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 SDCBP2Q9H190 292 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 UPF3AQ9H1J1 476 aaKnown RBP15.95■□□□□ 0.14
TRIM3-215ENST00000639856 SEMA4AQ9H3S1 761 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 SMYD3Q9H7B4 428 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 LRRC4CQ9HCJ2 640 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 SLC12A6Q9UHW9 1150 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 TMEM191CA6NGB0 347 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 GJB6O95452 261 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 RARBP10826 455 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 RARGP13631 454 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 CDH5P33151 784 aaPredicted RBP15.95■□□□□ 0.14
TRIM3-215ENST00000639856 CCT5P48643 541 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 RPL7AP62424 266 aaKnown RBP15.95■□□□□ 0.14
TRIM3-215ENST00000639856 SLC29A2Q14542 456 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 ODF2Q5BJF6 829 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 ZNF667Q5HYK9 610 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 WNT8BQ93098 351 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 ZMAT2Q96NC0 199 aaKnown RBP15.95■□□□□ 0.14
TRIM3-215ENST00000639856 EPN3Q9H201 632 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 PCDHGC3Q9UN70 934 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 USTQ9Y2C2 406 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 RRP15Q9Y3B9 282 aaKnown RBP15.95■□□□□ 0.14
TRIM3-215ENST00000639856 SCN1AP35498 2009 aa15.95■□□□□ 0.14
TRIM3-215ENST00000639856 TCRBV5S1A1TA0A578 114 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 TP73O15350 636 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 ADAMTS4O75173 837 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 TRPA1O75762 1119 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 GAS8O95995 478 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 GNAT1P11488 350 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 YWHAEP62258 255 aaKnown RBP15.94■□□□□ 0.14
TRIM3-215ENST00000639856 PPP2R2AP63151 447 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 ORC1Q13415 861 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 PTK6Q13882 451 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 SKIDA1Q1XH10 827 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 GDF6Q6KF10 455 aaPredicted RBP15.94■□□□□ 0.14
TRIM3-215ENST00000639856 ATL2Q8NHH9 583 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 TFAP2BQ92481 460 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 TLCD1Q96CP7 247 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 SNX27Q96L92 541 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 APOL6Q9BWW8 343 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 HEMGNQ9BXL5 484 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 BCO2Q9BYV7 579 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 OSBPL8Q9BZF1 889 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 RABEP2Q9H5N1 569 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 XPNPEP3Q9NQH7 507 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 DPP3Q9NY33 737 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 ASIC3Q9UHC3 531 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 GTF2IRD1Q9UHL9 959 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 LCMT1Q9UIC8 334 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 AGAP1Q9UPQ3 857 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 R3HDM2Q9Y2K5 976 aaKnown RBP15.94■□□□□ 0.14
TRIM3-215ENST00000639856 C2CD2Q9Y426 696 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 SRRM3A6NNA2 597 aaPredicted RBP15.94■□□□□ 0.14
TRIM3-215ENST00000639856 NDUFAB1O14561 156 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 CAND2O75155 1236 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 ITIH2P19823 946 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 AKAP5P24588 427 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 SSR1P43307 286 aaKnown RBP15.94■□□□□ 0.14
TRIM3-215ENST00000639856 MAGOHP61326 146 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms