RNA–Protein interactions for RNA: ENST00000639456.1

CROCCP2-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 2,575 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-204ENST00000639456 ARFGAP1Q8N6T3 406 aa18.82■□□□□ 0.6
CROCCP2-204ENST00000639456 PRPF31Q8WWY3 499 aaKnown RBP18.82■□□□□ 0.6
CROCCP2-204ENST00000639456 LRRC37BQ96QE4 947 aa18.82■□□□□ 0.6
CROCCP2-204ENST00000639456 LBHD1Q9BQE6 289 aaPredicted RBP18.82■□□□□ 0.6
CROCCP2-204ENST00000639456 MAFBQ9Y5Q3 323 aaPredicted RBP18.82■□□□□ 0.6
CROCCP2-204ENST00000639456 ACTL7BQ9Y614 415 aa18.82■□□□□ 0.6
CROCCP2-204ENST00000639456 GJA3Q9Y6H8 435 aa18.82■□□□□ 0.6
CROCCP2-204ENST00000639456 NUMBLQ9Y6R0 609 aa18.82■□□□□ 0.6
CROCCP2-204ENST00000639456 CLUHO75153 1309 aa18.82■□□□□ 0.6
CROCCP2-204ENST00000639456 TCRBV5S1A1TA0A578 114 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 H0YCG3 227 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 PIK3R2O00459 728 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 ABHD2P08910 425 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 ADRA1DP25100 572 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 ZNF132P52740 706 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 CDH8P55286 799 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 HIF1AQ16665 826 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 HHATQ5VTY9 493 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 CENPUQ71F23 418 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 TRIM50Q86XT4 487 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 FBF1Q8TES7 1133 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 WDR83Q9BRX9 315 aaKnown RBP18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 NPHS2Q9NP85 383 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 CYTH4Q9UIA0 394 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 POLIQ9UNA4 740 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 CNTN6Q9UQ52 1028 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 C15orf41Q9Y2V0 281 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 CEP83Q9Y592 693 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 PTPRAP18433 802 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 PSMA2P25787 234 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 TNFAIP1Q13829 316 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 XRRA1Q6P2D8 792 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 DENND1BQ6P3S1 775 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 C3orf62Q6ZUJ4 267 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 DPH6Q7L8W6 267 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 ACAD9Q9H845 621 aa18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 NKX1-2Q9UD57 310 aaPredicted RBP18.81■□□□□ 0.6
CROCCP2-204ENST00000639456 RGPD3A6NKT7 1758 aaPredicted RBP18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 RGPD4Q7Z3J3 1758 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 DNAH12Q6ZR08 3092 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 ALOX15BO15296 676 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 SKAP2O75563 359 aaPredicted RBP18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 LDHAP00338 332 aaKnown RBP18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 ALADP13716 330 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 MOGSQ13724 837 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 MORF4L2Q15014 288 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 MAPK6Q16659 721 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 PTPN20Q4JDL3 420 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 MICALL2Q8IY33 904 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 TMEM35BQ8NCS4 154 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 PYROXD1Q8WU10 500 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 JDP2Q8WYK2 163 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 PCYT2Q99447 389 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 NFASCO94856 1347 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 CALB1P05937 261 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 KRT19P08727 400 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 CCNB1P14635 433 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 SETDB1Q15047 1291 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 BBS9Q3SYG4 887 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 PLEKHG4Q58EX7 1191 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 OTOAQ7RTW8 1153 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 LRRN4Q8WUT4 740 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 CPT1BQ92523 772 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 TEX13BQ9BXU2 312 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 PICK1Q9NRD5 415 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 SLC17A7Q9P2U7 560 aa18.8■□□□□ 0.6
CROCCP2-204ENST00000639456 TYROBPO43914 113 aa18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 EDF1O60869 148 aaKnown RBP18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 LRCH4O75427 683 aa18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 CSDE1O75534 798 aaKnown RBP18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 TRPC3Q13507 836 aa18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 PDK4Q16654 411 aa18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 UNC45BQ8IWX7 931 aa18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 RIBC1Q8N443 379 aaPredicted RBP18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 FAM71DQ8N9W8 422 aa18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 FBXO36Q8NEA4 188 aa18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 TTC25Q96NG3 672 aa18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 ZNF570Q96NI8 536 aa18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 PLCD4Q9BRC7 762 aa18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 NOP53Q9NZM5 478 aaKnown RBP18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 RABGEF1Q9UJ41 708 aa18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 STARD13Q9Y3M8 1113 aa18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 LACTBP83111 547 aaPredicted RBP18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 RAB6CQ53S08 254 aa18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 HSPH1Q92598 858 aa18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 ZNF75CPQ92670 426 aaPredicted RBP18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 CDHR1Q96JP9 859 aa18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 RAB6CQ9H0N0 254 aa18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 UBN1Q9NPG3 1134 aa18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 PSMC3IPQ9P2W1 217 aaPredicted RBP18.79■□□□□ 0.6
CROCCP2-204ENST00000639456 C3orf70A6NLC5 250 aaPredicted RBP18.78■□□□□ 0.6
CROCCP2-204ENST00000639456 PRPF4O43172 522 aaKnown RBP eCLIP18.78■□□□□ 0.66e-7■■□□□ 12.5
CROCCP2-204ENST00000639456 TMEM63AO94886 807 aa18.78■□□□□ 0.6
CROCCP2-204ENST00000639456 MAP3K6O95382 1288 aa18.78■□□□□ 0.6
CROCCP2-204ENST00000639456 T-ENOLP0DO92 83 aa18.78■□□□□ 0.6
CROCCP2-204ENST00000639456 KRT3P12035 628 aa18.78■□□□□ 0.6
CROCCP2-204ENST00000639456 RXRBP28702 533 aa18.78■□□□□ 0.6
CROCCP2-204ENST00000639456 EPHB2P29323 1055 aa18.78■□□□□ 0.6
CROCCP2-204ENST00000639456 BASP1P80723 227 aaKnown RBP18.78■□□□□ 0.6
CROCCP2-204ENST00000639456 ATP11AP98196 1134 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms