RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 FYB2Q5VWT5 728 aa21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 TXNRD3NBQ6F5E7 133 aa21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 POLNQ7Z5Q5 900 aa21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 DHX33Q9H6R0 707 aaKnown RBP21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 RNPEPL1Q9HAU8 725 aa21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 FBXO40Q9UH90 709 aa21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 RABGEF1Q9UJ41 708 aa21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 E7ENQ6 273 aa21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 C2CD2LO14523 706 aa21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 SMNDC1O75940 238 aaKnown RBP eCLIP21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 LUC7L3O95232 432 aaKnown RBP21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 ASS1P00966 412 aaKnown RBP21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 ARL4CP56559 192 aa21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 GNPTABQ3T906 1256 aa21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 OTOAQ7RTW8 1153 aa21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 PPIL6Q8IXY8 311 aa21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 SLC7A6OSQ96CW6 309 aaPredicted RBP21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 WNK4Q96J92 1243 aa21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 CLUHO75153 1309 aa21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 T-ENOLP0DO92 83 aa21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 ARL2P36404 184 aa21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 PYROXD1Q8WU10 500 aa21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 RPL26L1Q9UNX3 145 aaKnown RBP21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 SNCAIPQ9Y6H5 919 aa21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 DOCK5Q9H7D0 1870 aa21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 SPATA31C2B4DYI2 1134 aa21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 HNRNPCL1O60812 293 aaKnown RBP21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 CTCFP49711 727 aaPredicted RBP21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 KLHL38Q2WGJ6 581 aa21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 ZNF772Q68DY9 489 aaPredicted RBP21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 ADGRD1Q6QNK2 874 aa21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 PAXIP1Q6ZW49 1069 aaPredicted RBP21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 CCDC125Q86Z20 511 aa21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 ANKMY2Q8IV38 441 aa21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 FAM13CQ8NE31 585 aa21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 MRRFQ96E11 262 aaKnown RBP21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 TEPSINQ96N21 525 aa21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 DHRS4Q9BTZ2 278 aa21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 ZNRF3Q9ULT6 936 aa21.15■□□□□ 0.98
SYNGAP1-227ENST00000638142 MYH9P35579 1960 aaKnown RBP21.14■□□□□ 0.98
SYNGAP1-227ENST00000638142 PPP1R12AO14974 1030 aaPredicted RBP21.14■□□□□ 0.98
SYNGAP1-227ENST00000638142 CALB2P22676 271 aa21.14■□□□□ 0.98
SYNGAP1-227ENST00000638142 CDH5P33151 784 aaPredicted RBP21.14■□□□□ 0.98
SYNGAP1-227ENST00000638142 TGFB2P61812 414 aa21.14■□□□□ 0.98
SYNGAP1-227ENST00000638142 BLMHQ13867 455 aa21.14■□□□□ 0.98
SYNGAP1-227ENST00000638142 SNRNP48Q6IEG0 339 aaKnown RBP21.14■□□□□ 0.98
SYNGAP1-227ENST00000638142 TTC13Q8NBP0 860 aa21.14■□□□□ 0.98
SYNGAP1-227ENST00000638142 ALKBH8Q96BT7 664 aaKnown RBP21.14■□□□□ 0.98
SYNGAP1-227ENST00000638142 ACSF2Q96CM8 615 aaPredicted RBP21.14■□□□□ 0.98
SYNGAP1-227ENST00000638142 TBC1D10AQ9BXI6 508 aa21.14■□□□□ 0.98
SYNGAP1-227ENST00000638142 ACSS3Q9H6R3 686 aa21.14■□□□□ 0.98
SYNGAP1-227ENST00000638142 TMEM134Q9H6X4 195 aa21.14■□□□□ 0.98
SYNGAP1-227ENST00000638142 CYP39A1Q9NYL5 469 aa21.14■□□□□ 0.98
SYNGAP1-227ENST00000638142 CORO1CQ9ULV4 474 aaPredicted RBP21.14■□□□□ 0.98
SYNGAP1-227ENST00000638142 PARP14Q460N5 1801 aa21.14■□□□□ 0.97
SYNGAP1-227ENST00000638142 OATP04181 439 aa21.14■□□□□ 0.97
SYNGAP1-227ENST00000638142 EIF4BP23588 611 aaKnown RBP21.14■□□□□ 0.97
SYNGAP1-227ENST00000638142 BRD2P25440 801 aaKnown RBP21.14■□□□□ 0.97
SYNGAP1-227ENST00000638142 OAZ1P54368 228 aa21.14■□□□□ 0.97
SYNGAP1-227ENST00000638142 GRIK3Q13003 919 aa21.14■□□□□ 0.97
SYNGAP1-227ENST00000638142 NLRP9Q7RTR0 991 aa21.14■□□□□ 0.97
SYNGAP1-227ENST00000638142 WDR49Q8IV35 697 aa21.14■□□□□ 0.97
SYNGAP1-227ENST00000638142 BRSK2Q8IWQ3 736 aa21.14■□□□□ 0.97
SYNGAP1-227ENST00000638142 REPS2Q8NFH8 660 aa21.14■□□□□ 0.97
SYNGAP1-227ENST00000638142 SLC7A3Q8WY07 619 aa21.14■□□□□ 0.97
SYNGAP1-227ENST00000638142 SPDL1Q96EA4 605 aa21.14■□□□□ 0.97
SYNGAP1-227ENST00000638142 SAR1AQ9NR31 198 aa21.14■□□□□ 0.97
SYNGAP1-227ENST00000638142 ZMYND8Q9ULU4 1186 aaPredicted RBP21.14■□□□□ 0.97
SYNGAP1-227ENST00000638142 MAFBQ9Y5Q3 323 aaPredicted RBP21.14■□□□□ 0.97
SYNGAP1-227ENST00000638142 C3orf70A6NLC5 250 aaPredicted RBP21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 GOLGA8SH3BPF8 625 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 GOLGA8MH3BSY2 632 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 TM9SF1O15321 606 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 PEX11AO75192 247 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 TROVE2P10155 538 aaKnown RBP eCLIP21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 FGFR1P11362 822 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 GNAZP19086 355 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 ATP4AP20648 1035 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 IRX1P78414 480 aaPredicted RBP21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 GRM1Q13255 1194 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 TFDP1Q14186 410 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 SEPT7Q16181 437 aaKnown RBP21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 WASHC2DQ5SRD0 308 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 GPAT2Q6NUI2 795 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 TTLL6Q8N841 843 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 NAT8LQ8N9F0 302 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 SH3TC2Q8TF17 1288 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 CPT1BQ92523 772 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 ZFP69BQ9UJL9 534 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 PCDHGC3Q9UN70 934 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 AGTPBP1Q9UPW5 1226 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 E7ESA3 106 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 SMAPO00193 183 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 BANF1O75531 89 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 TNFAIP1Q13829 316 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 CAPRIN2Q6IMN6 1127 aaKnown RBP21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 ZNF449Q6P9G9 518 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 LONP2Q86WA8 852 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 STK32AQ8WU08 396 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 PAFAH2Q99487 392 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms