RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 ZNF844Q08AG5 666 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 SF3A3Q12874 501 aaKnown RBP eCLIP8.34□□□□□ -1.07
GABRB3-225ENST00000638099 PDCLQ13371 301 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 FAM187BQ17R55 369 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 CHADLQ6NUI6 762 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 TRIM72Q6ZMU5 477 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 RHOT1Q8IXI2 618 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 ARFGAP1Q8N6T3 406 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 C7orf31Q8N865 590 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.34□□□□□ -1.07
GABRB3-225ENST00000638099 RUBCNQ92622 972 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 EXOC4Q96A65 974 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 TMEM176AQ96HP8 235 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 SH3GL2Q99962 352 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 BCO2Q9BYV7 579 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 OSBPL8Q9BZF1 889 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 RAB17Q9H0T7 212 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 MRPL47Q9HD33 250 aaKnown RBP8.34□□□□□ -1.07
GABRB3-225ENST00000638099 ANKRD65E5RJM6 399 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 FSCN2O14926 492 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 CILPO75339 1184 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 F2P00734 622 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 KRT3P12035 628 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 PSMA2P25787 234 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 CHKAP35790 457 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 PSEN2P49810 448 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 FKBP1BP68106 108 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 GUCY1A3Q02108 690 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 C15orf59Q2T9L4 293 aaPredicted RBP8.34□□□□□ -1.07
GABRB3-225ENST00000638099 FAM47CQ5HY64 1035 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 SYCP2LQ5T4T6 812 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 TMCO4Q5TGY1 634 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 ALS2CLQ60I27 953 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 CXCL17Q6UXB2 119 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 SAPCD2Q86UD0 394 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 TRPV1Q8NER1 839 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 TRIM11Q96F44 468 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 ZFP42Q96MM3 310 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 DDX23Q9BUQ8 820 aaKnown RBP8.34□□□□□ -1.07
GABRB3-225ENST00000638099 B3GNT5Q9BYG0 378 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 NFKBIZQ9BYH8 718 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 GCOM2Q9BZD3 368 aaPredicted RBP8.34□□□□□ -1.07
GABRB3-225ENST00000638099 FAM114A2Q9NRY5 505 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 GABRQQ9UN88 632 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 SCINQ9Y6U3 715 aa8.34□□□□□ -1.07
GABRB3-225ENST00000638099 TCRBV5S1A1TA0A578 114 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 H0YGN5 161 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 OPA1O60313 960 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 ECEL1O95672 775 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 DHX34Q14147 1143 aaKnown RBP8.33□□□□□ -1.08
GABRB3-225ENST00000638099 ODF2Q5BJF6 829 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 PPP1R26Q5T8A7 1209 aaPredicted RBP8.33□□□□□ -1.08
GABRB3-225ENST00000638099 IFNL1Q8IU54 200 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 MSL3Q8N5Y2 521 aaKnown RBP8.33□□□□□ -1.08
GABRB3-225ENST00000638099 ARRDC4Q8NCT1 418 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 HSPH1Q92598 858 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 WNT8BQ93098 351 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 MAGEB5Q9BZ81 275 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 DCLK3Q9C098 648 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 EPB41L4BQ9H329 900 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 PCYOX1Q9UHG3 505 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 TSPAN16Q9UKR8 245 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 DNPEPQ9ULA0 475 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.33□□□□□ -1.08
GABRB3-225ENST00000638099 CEP83Q9Y592 693 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 NFS1Q9Y697 457 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 LOC102724159A0A0B4J2E5 919 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 E5RJQ4 531 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 ACSL3O95573 720 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 CALB1P05937 261 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 EIF4BP23588 611 aaKnown RBP8.33□□□□□ -1.08
GABRB3-225ENST00000638099 LMO2P25791 158 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 ADORA2BP29275 332 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 HNRNPH2P55795 449 aaKnown RBP8.33□□□□□ -1.08
GABRB3-225ENST00000638099 ATP11AP98196 1134 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 SOX4Q06945 474 aaPredicted RBP8.33□□□□□ -1.08
GABRB3-225ENST00000638099 IFFO1Q0D2I5 559 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 NFX1Q12986 1120 aaKnown RBP8.33□□□□□ -1.08
GABRB3-225ENST00000638099 SLC29A2Q14542 456 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 SNX17Q15036 470 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 PWP2Q15269 919 aaKnown RBP8.33□□□□□ -1.08
GABRB3-225ENST00000638099 KRT71Q3SY84 523 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 FAM102AQ5T9C2 384 aaPredicted RBP8.33□□□□□ -1.08
GABRB3-225ENST00000638099 TRNP1Q6NT89 227 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 RGMBQ6NW40 437 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 GSTA5Q7RTV2 222 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 XYLT1Q86Y38 959 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 CCDC33Q8N5R6 958 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 OR6B3Q8NGW1 331 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 CLEC4CQ8WTT0 213 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 SEC14L1Q92503 715 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 NDRG1Q92597 394 aaKnown RBP8.33□□□□□ -1.08
GABRB3-225ENST00000638099 MIS12Q9H081 205 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 IP6K2Q9UHH9 426 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 RASAL2Q9UJF2 1139 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 ABT1Q9ULW3 272 aaKnown RBP8.33□□□□□ -1.08
GABRB3-225ENST00000638099 COL1A2P08123 1366 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 SPTLC1O15269 473 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 TP73O15350 636 aa8.33□□□□□ -1.08
GABRB3-225ENST00000638099 CCDC130P13994 396 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms