RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 CYP21A2P08686 494 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 RARGP13631 454 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 GJC1P36383 396 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 AKR1D1P51857 326 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 EMP3P54852 163 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 FAPQ12884 760 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 LAMC2Q13753 1193 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 CCDC58Q4VC31 144 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 ALFQ53S48 1182 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 DCAF6Q58WW2 860 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 ATG16L1Q676U5 607 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 OSTM1Q86WC4 334 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 ANGPTL6Q8NI99 470 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 ZFPM2Q8WW38 1151 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 PYDC1Q8WXC3 89 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 ASIC4Q96FT7 647 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 PLIN2Q99541 437 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 NEURL2Q9BR09 285 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 MKNK1Q9BUB5 465 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 MTMR12Q9C0I1 747 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 WDR12Q9GZL7 423 aaKnown RBP5.98□□□□□ -1.45
SCN1A-216ENST00000637968 SMARCAD1Q9H4L7 1026 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 S100A14Q9HCY8 104 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 SNTG2Q9NY99 539 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 WARS2Q9UGM6 360 aaKnown RBP5.98□□□□□ -1.45
SCN1A-216ENST00000637968 CFL2Q9Y281 166 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 SRPRBQ9Y5M8 271 aaKnown RBP5.98□□□□□ -1.45
SCN1A-216ENST00000637968 SLC30A1Q9Y6M5 507 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 STON1Q9Y6Q2 735 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 LAMC1P11047 1609 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 PVALEFA0A1B0GWK0 134 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 ARHGEF37A1IGU5 675 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 KRBA1A5PL33 1030 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 TRPC5OSA6NMA1 111 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 C2orf81A6NN90 581 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 CDK2AP1O14519 115 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 ZNF254O75437 659 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 IFNA14P01570 189 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 H2AFZP0C0S5 128 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 RAG1P15918 1043 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 BMP6P22004 513 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 CFL1P23528 166 aaKnown RBP5.98□□□□□ -1.45
SCN1A-216ENST00000637968 CBX5P45973 191 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 ALDH1A3P47895 512 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 SERPINH1P50454 418 aaKnown RBP5.98□□□□□ -1.45
SCN1A-216ENST00000637968 RUNX1T1Q06455 604 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 TSC22D1Q15714 1073 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 NAB2Q15742 525 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 TBCCQ15814 346 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 GPR162Q16538 588 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 MEI1Q5TIA1 1274 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 POTEAQ6S8J7 498 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 ATG14Q6ZNE5 492 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 H2AFVQ71UI9 128 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 CLNKQ7Z7G1 428 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 C11orf96Q7Z7L8 435 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 PRUNE1Q86TP1 453 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 TRIM59Q8IWR1 403 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 GIMAP8Q8ND71 665 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-216ENST00000637968 BEGAINQ9BUH8 593 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 OR2B2Q9GZK3 357 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 RNPEPQ9H4A4 650 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 JMJD4Q9H9V9 463 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 FANCFQ9NPI8 374 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 ZNF221Q9UK13 617 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 PCDHGA11Q9Y5H2 935 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 ZFYVE9O95405 1425 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 MAGI3Q5TCQ9 1506 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 LMTK2Q8IWU2 1503 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 LOC105371267A0A1B0GV96 52 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 E7EWF7 191 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 STMND1H3BQB6 276 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 ZNF213O14771 459 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 AXIN1O15169 862 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 YKT6O15498 198 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 NMT2O60551 498 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 SPAG6O75602 509 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 CCNKO75909 580 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 KRT37O76014 449 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 RHOBTB1O94844 696 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 ALX3O95076 343 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 PLEKHA8P1O95397 391 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 PAHP00439 452 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 ASS1P00966 412 aaKnown RBP5.98□□□□□ -1.45
SCN1A-216ENST00000637968 GCP02774 474 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 POLR2MP0CAP2 368 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 EVI2BP34910 448 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 PHKA1P46020 1223 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 NPTX2P47972 431 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 PRKCQQ04759 706 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 NFIAQ12857 509 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 DSC3Q14574 896 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 STAT4Q14765 748 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 SF3B3Q15393 1217 aaKnown RBP5.98□□□□□ -1.45
SCN1A-216ENST00000637968 CYP2A13Q16696 494 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 STOX1Q6ZVD7 989 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 AMIGO2Q86SJ2 522 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 TTC7BQ86TV6 843 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 C7orf57Q8NEG2 295 aa5.98□□□□□ -1.45
SCN1A-216ENST00000637968 SGCDQ92629 289 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms