RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 CDH8P55286 799 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 SMAD4Q13485 552 aaKnown RBP9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 MAPRE1Q15691 268 aaKnown RBP9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 NFE2Q16621 373 aaPredicted RBP9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 MAN2A1Q16706 1144 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 SPOPLQ6IQ16 392 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 TMC5Q6UXY8 1006 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 RNF19BQ6ZMZ0 732 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 RTL10Q7L3V2 364 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 APTXQ7Z2E3 356 aaKnown RBP9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 ELMOD1Q8N336 334 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 OR10T2Q8NGX3 314 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 SLC7A14Q8TBB6 771 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 C2orf15Q8WU43 125 aaKnown RBP9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 SMG7Q92540 1137 aaKnown RBP9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 SEMA4DQ92854 862 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 MSLNLQ96KJ4 702 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 RIPOR3Q96MK2 946 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 NT5C1BQ96P26 610 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 TMEM209Q96SK2 561 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 SYT15Q9BQS2 421 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 MRPL45Q9BRJ2 306 aaKnown RBP9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 TUBGCP2Q9BSJ2 902 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 NIF3L1Q9GZT8 377 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 ZCWPW1Q9H0M4 648 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 VPS16Q9H269 839 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 ADAM7Q9H2U9 754 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 SMYD3Q9H7B4 428 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 CYP3A43Q9HB55 503 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 SPTLC3Q9NUV7 552 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 ZDHHC7Q9NXF8 308 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 FBXW11Q9UKB1 542 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 CDH9Q9ULB4 789 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 PCDHB5Q9Y5E4 795 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 C2orf16Q68DN1 1984 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 DOCK6Q96HP0 2047 aa9.82□□□□□ -0.84
CACNA1A-239ENST00000637297 TRANK1O15050 2925 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 CDH23Q9H251 3354 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 MTMR11A4FU01 709 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 LGALS16A8MUM7 142 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 GABRDO14764 452 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 PMM2O15305 246 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 MBTPS2O43462 519 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 RFPL2O75678 378 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 HNRNPA1P09651 372 aaKnown RBP eCLIP9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 WEE2P0C1S8 567 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 CD58P19256 250 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 LMO2P25791 158 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 MTHFRP42898 656 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 ALDH1A3P47895 512 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 TUFMP49411 452 aaKnown RBP9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 YWHAEP62258 255 aaKnown RBP9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 CCZ1BP86790 482 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 CCZ1P86791 482 aaPredicted RBP9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 UBXN1Q04323 297 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 DUSP4Q13115 394 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 TBX2Q13207 712 aaPredicted RBP9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 PLD1Q13393 1074 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 TRIM14Q14142 442 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 TAF12Q16514 161 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 MGAT5BQ3V5L5 792 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 INTS6LQ5JSJ4 861 aaKnown RBP9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 IQCEQ6IPM2 695 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 SYCE2Q6PIF2 218 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 GBP6Q6ZN66 633 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 C4orf50Q6ZRC1 276 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 OSTM1Q86WC4 334 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 IRF2BP1Q8IU81 584 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 SPATA2LQ8IUW3 424 aaPredicted RBP9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 TCEAL8Q8IYN2 117 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 TTC39CQ8N584 583 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 SMRP1Q8NCR6 262 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 SPPL2BQ8TCT7 592 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 KBTBD7Q8WVZ9 684 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 TATDN2Q93075 761 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 FAXDC2Q96IV6 333 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 TNIP3Q96KP6 325 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 ZNF512Q96ME7 567 aaPredicted RBP9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 NECTIN4Q96NY8 510 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 ASB2Q96Q27 587 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 SEPT5Q99719 369 aaPredicted RBP9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 RTP3Q9BQQ7 232 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 PRKD2Q9BZL6 878 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 ABI2Q9NYB9 513 aaPredicted RBP9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 GTF3C4Q9UKN8 822 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 SLC27A5Q9Y2P5 690 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 COQ4Q9Y3A0 265 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 ITIH6Q6UXX5 1313 aa9.81□□□□□ -0.84
CACNA1A-239ENST00000637297 GRXCR2A6NFK2 248 aa9.8□□□□□ -0.84
CACNA1A-239ENST00000637297 AKR1B15C9JRZ8 316 aaPredicted RBP9.8□□□□□ -0.84
CACNA1A-239ENST00000637297 CCL16O15467 120 aa9.8□□□□□ -0.84
CACNA1A-239ENST00000637297 TEX33O43247 280 aa9.8□□□□□ -0.84
CACNA1A-239ENST00000637297 LRRN2O75325 713 aa9.8□□□□□ -0.84
CACNA1A-239ENST00000637297 SEC24AO95486 1093 aa9.8□□□□□ -0.84
CACNA1A-239ENST00000637297 PTPN1P18031 435 aaKnown RBP9.8□□□□□ -0.84
CACNA1A-239ENST00000637297 TBXAS1P24557 533 aaPredicted RBP9.8□□□□□ -0.84
CACNA1A-239ENST00000637297 HOXA9P31269 272 aa9.8□□□□□ -0.84
CACNA1A-239ENST00000637297 PBX1P40424 430 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms