RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 MICALL1Q8N3F8 863 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 ALLCQ8N6M5 410 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 ANKS4BQ8N8V4 417 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 C1orf127Q8N9H9 656 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 ARHGEF2Q92974 986 aaKnown RBP12.78□□□□□ -0.36
CLN8-212ENST00000637083 NKD2Q969F2 451 aaPredicted RBP12.78□□□□□ -0.36
CLN8-212ENST00000637083 SLC10A4Q96EP9 437 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 TMEM176AQ96HP8 235 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 PPCSQ9HAB8 311 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 PDGFCQ9NRA1 345 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 NINJ2Q9NZG7 142 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 ITGA11Q9UKX5 1188 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 TPX2Q9ULW0 747 aaKnown RBP12.78□□□□□ -0.36
CLN8-212ENST00000637083 A0A087WZ62 844 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 PI4K2BG5E9Z4 385 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 GPR25O00155 361 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 CDH16O75309 829 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 CILPO75339 1184 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 RNF8O76064 485 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 HMGCRP04035 888 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 ITGB3P05106 788 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 RAD23BP54727 409 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 CDC42EP1Q00587 391 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 ZNF252P-AS1Q0IIN9 211 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 NR1H3Q13133 447 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 TMEM132DQ14C87 1099 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 MORF4L2Q15014 288 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 LONRF1Q17RB8 773 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 ZNF792Q3KQV3 632 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 LDLRAD1Q5T700 205 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 JADE1Q6IE81 842 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 DENND1BQ6P3S1 775 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 LINC01465Q8N7H1 131 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 CEP120Q8N960 986 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 MDM1Q8TC05 714 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 SEC16BQ96JE7 1060 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 FDXACB1Q9BRP7 624 aaPredicted RBP12.78□□□□□ -0.36
CLN8-212ENST00000637083 DDX23Q9BUQ8 820 aaKnown RBP12.78□□□□□ -0.36
CLN8-212ENST00000637083 MINDY3Q9H8M7 445 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 ACTR5Q9H9F9 607 aaPredicted RBP12.78□□□□□ -0.36
CLN8-212ENST00000637083 LRRC4CQ9HCJ2 640 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 DDX20Q9UHI6 824 aaKnown RBP12.78□□□□□ -0.36
CLN8-212ENST00000637083 POLIQ9UNA4 740 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 C2CD2Q9Y426 696 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 ACTL7BQ9Y614 415 aa12.78□□□□□ -0.36
CLN8-212ENST00000637083 GOLGA6L7A0A1B0GV03 622 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 GOLGA8SH3BPF8 625 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 SMAPO00193 183 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 GJB1P08034 283 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 CYP2C8P10632 490 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 KRT10P13645 584 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 CDKN2BP42772 138 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 GABRB2P47870 512 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 GCLCP48506 637 aaPredicted RBP12.77□□□□□ -0.37
CLN8-212ENST00000637083 ARSEP51690 589 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 RBP5P82980 135 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 PLCB3Q01970 1234 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 CNGA2Q16280 664 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 TTC31Q49AM3 519 aaPredicted RBP12.77□□□□□ -0.37
CLN8-212ENST00000637083 PTPN20Q4JDL3 420 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 ATP13A4Q4VNC1 1196 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 RNF187Q5TA31 235 aaPredicted RBP12.77□□□□□ -0.37
CLN8-212ENST00000637083 CYP4A22Q5TCH4 519 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 TAPT1Q6NXT6 567 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 C6orf89Q6UWU4 347 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 ZNF410Q86VK4 478 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 DYDC1Q8WWB3 177 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 ACAP3Q96P50 834 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 RBM15Q96T37 977 aaKnown RBP eCLIP12.77□□□□□ -0.372e-6■■■■□ 23.2
CLN8-212ENST00000637083 PHACTR1Q9C0D0 580 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 PDZD7Q9H5P4 517 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 EFCC1Q9HA90 598 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 PCDH9Q9HC56 1237 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 ASNSD1Q9NWL6 643 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 SAMD15Q9P1V8 674 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 LGALS13Q9UHV8 139 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 SIX4Q9UIU6 781 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 DNPEPQ9ULA0 475 aa12.77□□□□□ -0.37
CLN8-212ENST00000637083 NFICP08651 508 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 CETPP11597 493 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 DESP17661 470 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 DRD4P21917 467 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 RFC1P35251 1148 aaPredicted RBP12.76□□□□□ -0.37
CLN8-212ENST00000637083 MAGEA4P43358 317 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 SNX16P57768 344 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 OGDHQ02218 1023 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 IFT88Q13099 833 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 AMHR2Q16671 573 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 EXOC3L1Q86VI1 746 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 CDR2LQ86X02 465 aaPredicted RBP12.76□□□□□ -0.37
CLN8-212ENST00000637083 SLC4A11Q8NBS3 891 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 ATXN2LQ8WWM7 1075 aaKnown RBP12.76□□□□□ -0.37
CLN8-212ENST00000637083 HPDLQ96IR7 371 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 ZNF668Q96K58 619 aaPredicted RBP12.76□□□□□ -0.37
CLN8-212ENST00000637083 ADAM7Q9H2U9 754 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 SHOC2Q9UQ13 582 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 ANKRD65E5RJM6 399 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 FSBPO95073 299 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 MYO1EQ12965 1108 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 OASLQ15646 514 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms