RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 PASKQ96RG2 1323 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 POLR2BP30876 1174 aaKnown RBP12.17□□□□□ -0.46
CLN6-217ENST00000636964 HOXA11P31270 313 aaPredicted RBP12.17□□□□□ -0.46
CLN6-217ENST00000636964 HADHBP55084 474 aaKnown RBP12.17□□□□□ -0.46
CLN6-217ENST00000636964 NOMO3P69849 1222 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 ZNF667Q5HYK9 610 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 UBR7Q8N806 425 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 TRPV1Q8NER1 839 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 MICAL1Q8TDZ2 1067 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 TMEM40Q8WWA1 233 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 CCDC114Q96M63 670 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 GCOM2Q9BZD3 368 aaPredicted RBP12.17□□□□□ -0.46
CLN6-217ENST00000636964 AGAP1Q9UPQ3 857 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 CNTN6Q9UQ52 1028 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 ANK1P16157 1881 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 CES2O00748 559 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 MGRN1O60291 552 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 CD19P15391 556 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 CDC25CP30307 473 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 PSMC4P43686 418 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 SCTRP47872 440 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 CENPCQ03188 943 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 FSCN1Q16658 493 aaKnown RBP12.17□□□□□ -0.46
CLN6-217ENST00000636964 SLC5A9Q2M3M2 681 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 C11orf63Q6NUN7 778 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 MICALCLQ6ZW33 695 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 ZNF410Q86VK4 478 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 SDCBP2Q9H190 292 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 SMYD3Q9H7B4 428 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 TMEM59LQ9UK28 342 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 MROH7Q68CQ1 1323 aa12.17□□□□□ -0.46
CLN6-217ENST00000636964 PGK1P00558 417 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 CPT1AP50416 773 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 TRIM32Q13049 653 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 TMEM132DQ14C87 1099 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 GLRA4Q5JXX5 417 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 ZFYVE27Q5T4F4 411 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 MON1BQ7L1V2 547 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 DPH6Q7L8W6 267 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 RASGEF1CQ8N431 466 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 KIF12Q96FN5 646 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 ATP6V1G3Q96LB4 118 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 GDF3Q9NR23 364 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 UVRAGQ9P2Y5 699 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 HMGXB4Q9UGU5 601 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 AMACRQ9UHK6 382 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 SLC12A6Q9UHW9 1150 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 SART1O43290 800 aaKnown RBP12.16□□□□□ -0.46
CLN6-217ENST00000636964 ZNF132P52740 706 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 TNNC1P63316 161 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 SREBF2Q12772 1141 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 USP4Q13107 963 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 C1orf131Q8NDD1 294 aaKnown RBP12.16□□□□□ -0.46
CLN6-217ENST00000636964 DCAF8L1A6NGE4 600 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 MTA2O94776 668 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 PYGMP11217 842 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 AKAP5P24588 427 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 LACTBP83111 547 aaPredicted RBP12.16□□□□□ -0.46
CLN6-217ENST00000636964 XRCC4Q13426 336 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 TCEAL1Q15170 157 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 GNASQ5JWF2 1037 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 CD302Q8IX05 232 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 UBL4BQ8N7F7 174 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 SOCS4Q8WXH5 440 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 STAMBPL1Q96FJ0 436 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 PLEKHG4BQ96PX9 1271 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 RUFY1Q96T51 708 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 CELF4Q9BZC1 486 aaKnown RBP12.16□□□□□ -0.46
CLN6-217ENST00000636964 ERVK-5Q9HDB9 667 aa12.16□□□□□ -0.46
CLN6-217ENST00000636964 MBLAC1A4D2B0 266 aaPredicted RBP12.15□□□□□ -0.46
CLN6-217ENST00000636964 ABL2P42684 1182 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 CAP1Q01518 475 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 C7orf31Q8N865 590 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 MAB21L3Q8N8X9 362 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 OR2W6PQ8NHA6 318 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 RUBCNQ92622 972 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 TWNKQ96RR1 684 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 TRAIPQ9BWF2 469 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 ASB7Q9H672 318 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 DPP3Q9NY33 737 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 SMIM35A0A1B0GVV1 85 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 A6NNZ2 444 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 EIF4BP23588 611 aaKnown RBP12.15□□□□□ -0.46
CLN6-217ENST00000636964 HPDP32754 393 aaPredicted RBP12.15□□□□□ -0.46
CLN6-217ENST00000636964 FLT3LGP49771 235 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 PEX5P50542 639 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 TUBB8Q3ZCM7 444 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 CXCL17Q6UXB2 119 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 DDX42Q86XP3 938 aaKnown RBP eCLIP12.15□□□□□ -0.46
CLN6-217ENST00000636964 IQCF2Q8IXL9 164 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 UHMK1Q8TAS1 419 aaKnown RBP12.15□□□□□ -0.46
CLN6-217ENST00000636964 CASKIN2Q8WXE0 1202 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 TRIB2Q92519 343 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 HPDLQ96IR7 371 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 ZMAT2Q96NC0 199 aaKnown RBP12.15□□□□□ -0.46
CLN6-217ENST00000636964 RPS6KC1Q96S38 1066 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 CARD9Q9H257 536 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 NXF3Q9H4D5 531 aaKnown RBP12.15□□□□□ -0.46
CLN6-217ENST00000636964 KLK14Q9P0G3 267 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 PIN4Q9Y237 131 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms