RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 RNF19BQ6ZMZ0 732 aa17.05■□□□□ 0.32
CLN6-216ENST00000636876 ACOT1Q86TX2 421 aa17.05■□□□□ 0.32
CLN6-216ENST00000636876 CRYBG2Q8N1P7 616 aa17.05■□□□□ 0.32
CLN6-216ENST00000636876 EFHBQ8N7U6 833 aa17.05■□□□□ 0.32
CLN6-216ENST00000636876 B3GALNT2Q8NCR0 500 aa17.05■□□□□ 0.32
CLN6-216ENST00000636876 ZNF461Q8TAF7 563 aa17.05■□□□□ 0.32
CLN6-216ENST00000636876 SHC3Q92529 594 aa17.05■□□□□ 0.32
CLN6-216ENST00000636876 TNIP3Q96KP6 325 aa17.05■□□□□ 0.32
CLN6-216ENST00000636876 NAA15Q9BXJ9 866 aaKnown RBP17.05■□□□□ 0.32
CLN6-216ENST00000636876 DNAI2Q9GZS0 605 aa17.05■□□□□ 0.32
CLN6-216ENST00000636876 IGFLR1Q9H665 355 aa17.05■□□□□ 0.32
CLN6-216ENST00000636876 CRTAC1Q9NQ79 661 aa17.05■□□□□ 0.32
CLN6-216ENST00000636876 TMLHEQ9NVH6 421 aa17.05■□□□□ 0.32
CLN6-216ENST00000636876 AFF4Q9UHB7 1163 aaKnown RBP17.05■□□□□ 0.32
CLN6-216ENST00000636876 GTF3C4Q9UKN8 822 aa17.05■□□□□ 0.32
CLN6-216ENST00000636876 PCDHB4Q9Y5E5 795 aa17.05■□□□□ 0.32
CLN6-216ENST00000636876 PLXNA3P51805 1871 aa17.05■□□□□ 0.32
CLN6-216ENST00000636876 NCOR1O75376 2440 aa17.05■□□□□ 0.32
CLN6-216ENST00000636876 MYBPHLA2RUH7 354 aa17.04■□□□□ 0.32
CLN6-216ENST00000636876 AP5Z1O43299 807 aa17.04■□□□□ 0.32
CLN6-216ENST00000636876 EPCAMP16422 314 aa17.04■□□□□ 0.32
CLN6-216ENST00000636876 RAD23BP54727 409 aa17.04■□□□□ 0.32
CLN6-216ENST00000636876 SMARCB1Q12824 385 aa17.04■□□□□ 0.32
CLN6-216ENST00000636876 KCNC3Q14003 757 aa17.04■□□□□ 0.32
CLN6-216ENST00000636876 MAPRE1Q15691 268 aaKnown RBP17.04■□□□□ 0.32
CLN6-216ENST00000636876 NFE2Q16621 373 aaPredicted RBP17.04■□□□□ 0.32
CLN6-216ENST00000636876 ZNF394Q53GI3 561 aa17.04■□□□□ 0.32
CLN6-216ENST00000636876 MDH1BQ5I0G3 518 aa17.04■□□□□ 0.32
CLN6-216ENST00000636876 SMYD5Q6GMV2 418 aa17.04■□□□□ 0.32
CLN6-216ENST00000636876 TMEM270Q6UE05 265 aa17.04■□□□□ 0.32
CLN6-216ENST00000636876 SLC4A11Q8NBS3 891 aa17.04■□□□□ 0.32
CLN6-216ENST00000636876 FBXW11Q9UKB1 542 aa17.04■□□□□ 0.32
CLN6-216ENST00000636876 CNTN6Q9UQ52 1028 aa17.04■□□□□ 0.32
CLN6-216ENST00000636876 HCFC2Q9Y5Z7 792 aa17.04■□□□□ 0.32
CLN6-216ENST00000636876 BRWD1Q9NSI6 2320 aa17.04■□□□□ 0.32
CLN6-216ENST00000636876 MTMR11A4FU01 709 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 NCK2O43639 380 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 VNN2O95498 520 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 SPATA31D3P0C874 917 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 KRT5P13647 590 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 ATF2P15336 505 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 TRIM21P19474 475 aaKnown RBP17.03■□□□□ 0.32
CLN6-216ENST00000636876 ZNF132P52740 706 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 POLR2FP61218 127 aaKnown RBP17.03■□□□□ 0.32
CLN6-216ENST00000636876 RAPGEF1Q13905 1077 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 DRAP1Q14919 205 aaPredicted RBP17.03■□□□□ 0.32
CLN6-216ENST00000636876 COL19A1Q14993 1142 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 LLGL2Q6P1M3 1020 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 SPATA31D4Q6ZUB0 917 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 ATAD1Q8NBU5 361 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 RBBP8NLQ8NC74 664 aaPredicted RBP17.03■□□□□ 0.32
CLN6-216ENST00000636876 KREMEN2Q8NCW0 462 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 VN1R2Q8NFZ6 395 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 MYCBPAPQ8TBZ2 947 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 C2orf15Q8WU43 125 aaKnown RBP17.03■□□□□ 0.32
CLN6-216ENST00000636876 TMEM176AQ96HP8 235 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 PGLYRP2Q96PD5 576 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 LPIN3Q9BQK8 851 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 MAFFQ9ULX9 164 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 PCDHB5Q9Y5E4 795 aa17.03■□□□□ 0.32
CLN6-216ENST00000636876 RNF225M0QZC1 329 aaPredicted RBP17.02■□□□□ 0.32
CLN6-216ENST00000636876 LINC01565O15544 149 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 GLP2RO95838 553 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 PAEPP09466 180 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 RBM10P98175 930 aaKnown RBP17.02■□□□□ 0.32
CLN6-216ENST00000636876 ADCY1Q08828 1119 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 ADAM15Q13444 863 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 C4orf50Q6ZRC1 276 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 TCEAL8Q8IYN2 117 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 SPPL2BQ8TCT7 592 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 HDAC7Q8WUI4 952 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 CASP10Q92851 521 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 MYLPFQ96A32 169 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 STK33Q9BYT3 514 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 TRIM5Q9C035 493 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 GPR88Q9GZN0 384 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 PLEKHA4Q9H4M7 779 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 NLRC4Q9NPP4 1024 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 MAN1C1Q9NR34 630 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 ABI2Q9NYB9 513 aaPredicted RBP17.02■□□□□ 0.32
CLN6-216ENST00000636876 CEP72Q9P209 647 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 DPP7Q9UHL4 492 aa17.02■□□□□ 0.32
CLN6-216ENST00000636876 MTCL1Q9Y4B5 1905 aaKnown RBP17.02■□□□□ 0.31
CLN6-216ENST00000636876 FOXN3O00409 490 aaPredicted RBP17.01■□□□□ 0.31
CLN6-216ENST00000636876 SEC24AO95486 1093 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 ELF1P32519 619 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 USP8P40818 1118 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 CDR1P51861 262 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 CCDC85BQ15834 202 aaPredicted RBP17.01■□□□□ 0.31
CLN6-216ENST00000636876 CTC1Q2NKJ3 1217 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 LIN9Q5TKA1 542 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 ELMSAN1Q6PJG2 1045 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 TMEM184AQ6ZMB5 413 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 SPATA2LQ8IUW3 424 aaPredicted RBP17.01■□□□□ 0.31
CLN6-216ENST00000636876 FAM71AQ8IYT1 594 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 TTC9BQ8N6N2 239 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 C12orf29Q8N999 325 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 PCED1BQ96HM7 432 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 FUBP3Q96I24 572 aaKnown RBP eCLIP17.01■□□□□ 0.31
CLN6-216ENST00000636876 HEXIM2Q96MH2 286 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms