RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 PSMD3O43242 534 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 RPS12P25398 132 aaKnown RBP9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 RFC5P40937 340 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 MAGOHP61326 146 aaKnown RBP9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 CYP4X1Q8N118 509 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 MMGT1Q8N4V1 131 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 MRFAP1L1Q96HT8 127 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 DDX47Q9H0S4 455 aaKnown RBP9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 KCTD10Q9H3F6 313 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 STAP2Q9UGK3 403 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 TRMT6Q9UJA5 497 aaKnown RBP9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 RNF112Q9ULX5 631 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 RPAP1Q9BWH6 1393 aaPredicted RBP9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 MYPNQ86TC9 1320 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 IFRD1O00458 451 aaPredicted RBP9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 HOXA2O43364 376 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 THP07101 528 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 MYL2P10916 166 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 ENO3P13929 434 aaPredicted RBP9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 CTNNB1P35222 781 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 PRIM2P49643 509 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 NME5P56597 212 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 SHROOM1Q2M3G4 852 aaPredicted RBP9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 ENOSF1Q7L5Y1 443 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 OTOAQ7RTW8 1153 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 ITIH5Q86UX2 942 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 PAPOLBQ9NRJ5 636 aaKnown RBP9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 DIS3Q9Y2L1 958 aaKnown RBP9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 TCOF1Q13428 1488 aaKnown RBP9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 A0A087X0T9 212 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 CAPN1P07384 714 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 IL10P22301 178 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 RPS6P62753 249 aaKnown RBP9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 KDSRQ06136 332 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 MAPRE1Q15691 268 aaKnown RBP9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 MTSS1LQ765P7 747 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 TARS2Q9BW92 718 aaKnown RBP9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 TMEM60Q9H2L4 133 aa9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 UTP6Q9NYH9 597 aaKnown RBP9.25□□□□□ -0.93
CHRNA7-219ENST00000636709 OPLAHO14841 1288 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 MFAP3LO75121 409 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 RTN2O75298 545 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 RHOCP08134 193 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 CYP2C8P10632 490 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 RESTQ13127 1097 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 MIIPQ5JXC2 388 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 TRIM65Q6PJ69 517 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 SPIRE2Q8WWL2 714 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 PRMT7Q9NVM4 692 aaPredicted RBP9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 GSTM1P09488 218 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 NBPF12Q5TAG4 269 aaPredicted RBP9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 C12orf60Q5U649 245 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 TRIM69Q86WT6 500 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 COL23A1Q86Y22 540 aaPredicted RBP9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 VSTM4Q8IW00 320 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 RDM1Q8NG50 284 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 NDEL1Q9GZM8 345 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 SPATA31A1Q5TZJ5 1347 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 LRRIQ3A6PVS8 624 aaPredicted RBP9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 WDR47O94967 919 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 CCL23P55773 120 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 OXCT1P55809 520 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 ZNF543Q08ER8 600 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 CNTN1Q12860 1018 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 CCDC60Q8IWA6 550 aaPredicted RBP9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 SGF29Q96ES7 293 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 HDAC6Q9UBN7 1215 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 TBC1D3BA6NDS4 549 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 STRNO43815 780 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 ABCB1P08183 1280 aaPredicted RBP9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 GPD1P21695 349 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 ACADSBP45954 432 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 NPEPPSP55786 919 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 RHOAP61586 193 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 BTNL9Q6UXG8 535 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 EXD1Q8NHP7 514 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 IPCEF1Q8WWN9 437 aaPredicted RBP9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 LNPEPQ9UIQ6 1025 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 GGT7Q9UJ14 662 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 DYRK1BQ9Y463 629 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 AKAP10O43572 662 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 SERPINB4P48594 390 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 MAP3K10Q02779 954 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 DENND5BQ6ZUT9 1274 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 FAM124AQ86V42 546 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 ENGASEQ8NFI3 743 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 MXRA8Q9BRK3 442 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 KCNH7Q9NS40 1196 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 MIF4GDA9UHW6 222 aaKnown RBP9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 HLA-DRAP01903 254 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 KRT8P05787 483 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 KRT4P19013 534 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 BEX3Q00994 111 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 HLA-DQA1Q5Y7H0 255 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 GRAMD4Q6IC98 578 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 SPATS2Q86XZ4 545 aaKnown RBP9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 B3GALNT2Q8NCR0 500 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 RABGGTAQ92696 567 aa9.24□□□□□ -0.93
CHRNA7-219ENST00000636709 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms