RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 ENOX1Q8TC92 643 aaKnown RBP10.4□□□□□ -0.75
LINC00339-210ENST00000635675 SPPL2BQ8TCT7 592 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 TATDN2Q93075 761 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 NIF3L1Q9GZT8 377 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 CYP3A43Q9HB55 503 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 ABCB6Q9NP58 842 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 CD320Q9NPF0 282 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 CRTAC1Q9NQ79 661 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 HCFC1R1Q9NWW0 138 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 CEP72Q9P209 647 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 DNMT3BQ9UBC3 853 aaKnown RBP10.4□□□□□ -0.75
LINC00339-210ENST00000635675 YIPF1Q9Y548 306 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 PCDHB5Q9Y5E4 795 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.4□□□□□ -0.75
LINC00339-210ENST00000635675 NOTCH4Q99466 2003 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 DENND4AQ7Z401 1863 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 A8MXQ7 604 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 N4BP1O75113 896 aaKnown RBP10.39□□□□□ -0.75
LINC00339-210ENST00000635675 SOAT2O75908 522 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 CLSTN1O94985 981 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 AFPP02771 609 aaKnown RBP10.39□□□□□ -0.75
LINC00339-210ENST00000635675 PTPN2P17706 415 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 PTPN1P18031 435 aaKnown RBP10.39□□□□□ -0.75
LINC00339-210ENST00000635675 ALDH1A3P47895 512 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 PSMC1P62191 440 aaKnown RBP10.39□□□□□ -0.75
LINC00339-210ENST00000635675 NTHL1P78549 312 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 TYRO3Q06418 890 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 INCA1Q0VD86 236 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 MAPRE1Q15691 268 aaKnown RBP10.39□□□□□ -0.75
LINC00339-210ENST00000635675 CFAP221Q4G0U5 840 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 WDR44Q5JSH3 913 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 GJD3Q8N144 294 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 CRYBG2Q8N1P7 616 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 FUBP3Q96I24 572 aaKnown RBP eCLIP10.39□□□□□ -0.75
LINC00339-210ENST00000635675 RPGRIP1Q96KN7 1286 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 UHRF1Q96T88 793 aaPredicted RBP10.39□□□□□ -0.75
LINC00339-210ENST00000635675 LPIN3Q9BQK8 851 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 COL25A1Q9BXS0 654 aaPredicted RBP10.39□□□□□ -0.75
LINC00339-210ENST00000635675 DNAJC25Q9H1X3 360 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 DPEP3Q9H4B8 488 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 AVENQ9NQS1 362 aaPredicted RBP10.39□□□□□ -0.75
LINC00339-210ENST00000635675 SAMSN1Q9NSI8 373 aaKnown RBP10.39□□□□□ -0.75
LINC00339-210ENST00000635675 ABI2Q9NYB9 513 aaPredicted RBP10.39□□□□□ -0.75
LINC00339-210ENST00000635675 USTQ9Y2C2 406 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 BDP1A6H8Y1 2624 aa10.39□□□□□ -0.75
LINC00339-210ENST00000635675 CLUHO75153 1309 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 CILPO75339 1184 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 LETM1O95202 739 aaPredicted RBP10.38□□□□□ -0.75
LINC00339-210ENST00000635675 RHOP08100 348 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 ATF6P18850 670 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 CYP2F1P24903 491 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 MAGEA11P43364 429 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 NDST1P52848 882 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 EPHB3P54753 998 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 CETN1Q12798 172 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 PLD1Q13393 1074 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 MGAT5BQ3V5L5 792 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 MDH1BQ5I0G3 518 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 C4orf50Q6ZRC1 276 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 UNC93AQ86WB7 457 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 CREBRFQ8IUR6 639 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 SPATA2LQ8IUW3 424 aaPredicted RBP10.38□□□□□ -0.75
LINC00339-210ENST00000635675 FAM114A1Q8IWE2 563 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 B3GALNT2Q8NCR0 500 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 EHBP1Q8NDI1 1231 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 WHAMMQ8TF30 809 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 PCED1BQ96HM7 432 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 ZNF512Q96ME7 567 aaPredicted RBP10.38□□□□□ -0.75
LINC00339-210ENST00000635675 SEPT5Q99719 369 aaPredicted RBP10.38□□□□□ -0.75
LINC00339-210ENST00000635675 ARID3AQ99856 593 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 LRRC3Q9BY71 257 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 FAM124BQ9H5Z6 455 aaPredicted RBP10.38□□□□□ -0.75
LINC00339-210ENST00000635675 HMGXB4Q9UGU5 601 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 NR2E1Q9Y466 385 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 NFE2L3Q9Y4A8 694 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 ASB3Q9Y575 518 aa10.38□□□□□ -0.75
LINC00339-210ENST00000635675 C2CD4DB7Z1M9 353 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 FSHRP23945 695 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 MTIF2P46199 727 aaKnown RBP10.37□□□□□ -0.75
LINC00339-210ENST00000635675 EPHA5P54756 1037 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 CUL2Q13617 745 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 PABPC1LQ4VXU2 614 aaKnown RBP10.37□□□□□ -0.75
LINC00339-210ENST00000635675 HSP90AA4PQ58FG1 418 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 CDKAL1Q5VV42 579 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 IQCEQ6IPM2 695 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 OTOP3Q7RTS5 596 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 DNAJB7Q7Z6W7 309 aaPredicted RBP10.37□□□□□ -0.75
LINC00339-210ENST00000635675 ACOT1Q86TX2 421 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 HS6ST3Q8IZP7 471 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 ELMOD1Q8N336 334 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 TTC39CQ8N584 583 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 ITFG1Q8TB96 612 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 PSMG2Q969U7 264 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 MYLPFQ96A32 169 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 TNIP3Q96KP6 325 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 TWNKQ96RR1 684 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 CORO1BQ9BR76 489 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 FUCA2Q9BTY2 467 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 B3GNT5Q9BYG0 378 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 CISHQ9NSE2 258 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms