RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 LIMS2Q7Z4I7 341 aa15.72■□□□□ 0.11
PNKP-221ENST00000627317 ZDHHC14Q8IZN3 488 aa15.72■□□□□ 0.11
PNKP-221ENST00000627317 KREMEN2Q8NCW0 462 aa15.72■□□□□ 0.11
PNKP-221ENST00000627317 EHBP1Q8NDI1 1231 aa15.72■□□□□ 0.11
PNKP-221ENST00000627317 MRPL45Q9BRJ2 306 aaKnown RBP15.72■□□□□ 0.11
PNKP-221ENST00000627317 CYP3A43Q9HB55 503 aa15.72■□□□□ 0.11
PNKP-221ENST00000627317 DDX43Q9NXZ2 648 aaKnown RBP15.72■□□□□ 0.11
PNKP-221ENST00000627317 DPP7Q9UHL4 492 aa15.72■□□□□ 0.11
PNKP-221ENST00000627317 NR2E1Q9Y466 385 aa15.72■□□□□ 0.11
PNKP-221ENST00000627317 CCDC195A0A1B0GUA6 201 aa15.71■□□□□ 0.11
PNKP-221ENST00000627317 ZMYND10O75800 440 aa15.71■□□□□ 0.11
PNKP-221ENST00000627317 SERPINC1P01008 464 aa15.71■□□□□ 0.11
PNKP-221ENST00000627317 TBXAS1P24557 533 aaPredicted RBP15.71■□□□□ 0.11
PNKP-221ENST00000627317 CDH8P55286 799 aa15.71■□□□□ 0.11
PNKP-221ENST00000627317 TSPY1Q01534 308 aa15.71■□□□□ 0.11
PNKP-221ENST00000627317 PTPN21Q16825 1174 aa15.71■□□□□ 0.11
PNKP-221ENST00000627317 FILIP1LQ4L180 1135 aa15.71■□□□□ 0.11
PNKP-221ENST00000627317 OSTM1Q86WC4 334 aa15.71■□□□□ 0.11
PNKP-221ENST00000627317 PPM1KQ8N3J5 372 aa15.71■□□□□ 0.11
PNKP-221ENST00000627317 OR6B3Q8NGW1 331 aa15.71■□□□□ 0.11
PNKP-221ENST00000627317 KBTBD7Q8WVZ9 684 aa15.71■□□□□ 0.11
PNKP-221ENST00000627317 EDAQ92838 391 aa15.71■□□□□ 0.11
PNKP-221ENST00000627317 TATDN2Q93075 761 aa15.71■□□□□ 0.11
PNKP-221ENST00000627317 FAXDC2Q96IV6 333 aa15.71■□□□□ 0.11
PNKP-221ENST00000627317 BCO2Q9BYV7 579 aa15.71■□□□□ 0.11
PNKP-221ENST00000627317 SDCBP2Q9H190 292 aa15.71■□□□□ 0.11
PNKP-221ENST00000627317 WDR6Q9NNW5 1121 aaKnown RBP15.71■□□□□ 0.11
PNKP-221ENST00000627317 CLUHO75153 1309 aa15.7■□□□□ 0.1
PNKP-221ENST00000627317 C2orf16Q68DN1 1984 aa15.7■□□□□ 0.1
PNKP-221ENST00000627317 PRR33A8MZF0 331 aa15.7■□□□□ 0.1
PNKP-221ENST00000627317 GABRDO14764 452 aa15.7■□□□□ 0.1
PNKP-221ENST00000627317 POU2F2P09086 479 aa15.7■□□□□ 0.1
PNKP-221ENST00000627317 FAM163BP0C2L3 166 aa15.7■□□□□ 0.1
PNKP-221ENST00000627317 ACAT1P24752 427 aaKnown RBP15.7■□□□□ 0.1
PNKP-221ENST00000627317 HOXA9P31269 272 aa15.7■□□□□ 0.1
PNKP-221ENST00000627317 GNL1P36915 607 aaPredicted RBP15.7■□□□□ 0.1
PNKP-221ENST00000627317 YWHAEP62258 255 aaKnown RBP15.7■□□□□ 0.1
PNKP-221ENST00000627317 ROR1Q01973 937 aa15.7■□□□□ 0.1
PNKP-221ENST00000627317 CUL2Q13617 745 aa15.7■□□□□ 0.1
PNKP-221ENST00000627317 TRIM65Q6PJ69 517 aa15.7■□□□□ 0.1
PNKP-221ENST00000627317 ELMSAN1Q6PJG2 1045 aa15.7■□□□□ 0.1
PNKP-221ENST00000627317 CCDC149Q6ZUS6 474 aa15.7■□□□□ 0.1
PNKP-221ENST00000627317 APTXQ7Z2E3 356 aaKnown RBP15.7■□□□□ 0.1
PNKP-221ENST00000627317 OR10T2Q8NGX3 314 aa15.7■□□□□ 0.1
PNKP-221ENST00000627317 LMO3Q8TAP4 145 aa15.7■□□□□ 0.1
PNKP-221ENST00000627317 RTP3Q9BQQ7 232 aa15.7■□□□□ 0.1
PNKP-221ENST00000627317 SYT15Q9BQS2 421 aa15.7■□□□□ 0.1
PNKP-221ENST00000627317 PRKD2Q9BZL6 878 aa15.7■□□□□ 0.1
PNKP-221ENST00000627317 TECTAO75443 2155 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 LRRC10BA6NIK2 292 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 SPDYE4A6NLX3 237 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 A8MXQ7 604 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 ABLIM3O94929 683 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 OR4Q2P0C623 313 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 CD58P19256 250 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 TRIM21P19474 475 aaKnown RBP15.69■□□□□ 0.1
PNKP-221ENST00000627317 SLC9A1P19634 815 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 PON1P27169 355 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 ZXDAP98168 799 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 UBXN1Q04323 297 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 DCP1BQ8IZD4 617 aaKnown RBP15.69■□□□□ 0.1
PNKP-221ENST00000627317 TTC39CQ8N584 583 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 TDRD5Q8NAT2 981 aaKnown RBP15.69■□□□□ 0.1
PNKP-221ENST00000627317 SMG7Q92540 1137 aaKnown RBP15.69■□□□□ 0.1
PNKP-221ENST00000627317 TMEM209Q96SK2 561 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 ARID3AQ99856 593 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 ACBD6Q9BR61 282 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 LSM14BQ9BX40 385 aaKnown RBP15.69■□□□□ 0.1
PNKP-221ENST00000627317 DNAI2Q9GZS0 605 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 APEX2Q9UBZ4 518 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 CDH9Q9ULB4 789 aa15.69■□□□□ 0.1
PNKP-221ENST00000627317 WDR27A2RRH5 827 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 HCRTO43612 131 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 C8AP07357 584 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 PDGFRBP09619 1106 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 HNRNPA1P09651 372 aaKnown RBP eCLIP15.68■□□□□ 0.1
PNKP-221ENST00000627317 NDST1P52848 882 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 PSMC1P62191 440 aaKnown RBP15.68■□□□□ 0.1
PNKP-221ENST00000627317 FANCCQ00597 558 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 GCNT1Q02742 428 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 INCA1Q0VD86 236 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 SYCP1Q15431 976 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 SLC39A12Q504Y0 691 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 INTS6LQ5JSJ4 861 aaKnown RBP15.68■□□□□ 0.1
PNKP-221ENST00000627317 TPGS2Q68CL5 300 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 RRAGAQ7L523 313 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 ARHGEF19Q8IW93 802 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 ASIC4Q96FT7 647 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 TNIP3Q96KP6 325 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 FAM81BQ96LP2 452 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 PCMTD1Q96MG8 357 aaPredicted RBP15.68■□□□□ 0.1
PNKP-221ENST00000627317 ZCWPW1Q9H0M4 648 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 FAM124BQ9H5Z6 455 aaPredicted RBP15.68■□□□□ 0.1
PNKP-221ENST00000627317 CISHQ9NSE2 258 aa15.68■□□□□ 0.1
PNKP-221ENST00000627317 COL9A1P20849 921 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 LMO2P25791 158 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 ELF1P32519 619 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 NFE2Q16621 373 aaPredicted RBP15.67■□□□□ 0.1
PNKP-221ENST00000627317 LIN9Q5TKA1 542 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 PHLDB3Q6NSJ2 640 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms