RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 ZPBP2Q6X784 338 aa18.64■□□□□ 0.57
PCF11-207ENST00000624931 ADAT2Q7Z6V5 191 aaKnown RBP18.64■□□□□ 0.57
PCF11-207ENST00000624931 RPUSD2Q8IZ73 545 aaKnown RBP18.64■□□□□ 0.57
PCF11-207ENST00000624931 BBOF1Q8ND07 529 aa18.64■□□□□ 0.57
PCF11-207ENST00000624931 SLAIN1Q8ND83 568 aa18.64■□□□□ 0.57
PCF11-207ENST00000624931 MIEF2Q96C03 454 aa18.64■□□□□ 0.57
PCF11-207ENST00000624931 ANKRD27Q96NW4 1050 aa18.64■□□□□ 0.57
PCF11-207ENST00000624931 UBE2TQ9NPD8 197 aaPredicted RBP18.64■□□□□ 0.57
PCF11-207ENST00000624931 BAIAP2L1Q9UHR4 511 aa18.64■□□□□ 0.57
PCF11-207ENST00000624931 ARL2BPQ9Y2Y0 163 aa18.64■□□□□ 0.57
PCF11-207ENST00000624931 SMIM35A0A1B0GVV1 85 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 KPNA6O60684 536 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 LRRN2O75325 713 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 MYCP01106 439 aaPredicted RBP18.63■□□□□ 0.57
PCF11-207ENST00000624931 TNFSF9P41273 254 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 SKIV2L2P42285 1042 aaKnown RBP18.63■□□□□ 0.57
PCF11-207ENST00000624931 FAM47CQ5HY64 1035 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 ATF7IP2Q5U623 682 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 LMBRD2Q68DH5 695 aaPredicted RBP18.63■□□□□ 0.57
PCF11-207ENST00000624931 GDF6Q6KF10 455 aaPredicted RBP18.63■□□□□ 0.57
PCF11-207ENST00000624931 TTC27Q6P3X3 843 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 IFNLR1Q8IU57 520 aaPredicted RBP18.63■□□□□ 0.57
PCF11-207ENST00000624931 MAB21L3Q8N8X9 362 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 MFSD14AQ96MC6 490 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 OSMRQ99650 979 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 NFKBIZQ9BYH8 718 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 LRRC4CQ9HCJ2 640 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 SUFUQ9UMX1 484 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.63■□□□□ 0.57
PCF11-207ENST00000624931 FSCN2O14926 492 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 GPR32O75388 356 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 CCND1P24385 295 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 GBP2P32456 591 aaPredicted RBP18.63■□□□□ 0.57
PCF11-207ENST00000624931 MAP2K1Q02750 393 aaPredicted RBP18.63■□□□□ 0.57
PCF11-207ENST00000624931 EPC2Q52LR7 807 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 EXOC3L1Q86VI1 746 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 EPS8L3Q8TE67 593 aaKnown RBP18.63■□□□□ 0.57
PCF11-207ENST00000624931 WNT8BQ93098 351 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 TCHPQ9BT92 498 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 BEGAINQ9BUH8 593 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 TRIM7Q9C029 511 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 PRMT7Q9NVM4 692 aaPredicted RBP18.63■□□□□ 0.57
PCF11-207ENST00000624931 GTF3C4Q9UKN8 822 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 ACTL7BQ9Y614 415 aa18.63■□□□□ 0.57
PCF11-207ENST00000624931 CLDN3O15551 220 aa18.62■□□□□ 0.57
PCF11-207ENST00000624931 SPOPO43791 374 aa18.62■□□□□ 0.57
PCF11-207ENST00000624931 FAM189A1O60320 539 aa18.62■□□□□ 0.57
PCF11-207ENST00000624931 TOM1L1O75674 476 aa18.62■□□□□ 0.57
PCF11-207ENST00000624931 DLATP10515 647 aaKnown RBP18.62■□□□□ 0.57
PCF11-207ENST00000624931 PROZP22891 400 aa18.62■□□□□ 0.57
PCF11-207ENST00000624931 CST5P28325 142 aaPredicted RBP18.62■□□□□ 0.57
PCF11-207ENST00000624931 BNIP1Q12981 228 aa18.62■□□□□ 0.57
PCF11-207ENST00000624931 MESDQ14696 234 aa18.62■□□□□ 0.57
PCF11-207ENST00000624931 SLFN12LQ6IEE8 588 aa18.62■□□□□ 0.57
PCF11-207ENST00000624931 CEP120Q8N960 986 aa18.62■□□□□ 0.57
PCF11-207ENST00000624931 PARD3BQ8TEW8 1205 aa18.62■□□□□ 0.57
PCF11-207ENST00000624931 CKAP2Q8WWK9 683 aa18.62■□□□□ 0.57
PCF11-207ENST00000624931 KRT35Q92764 455 aa18.62■□□□□ 0.57
PCF11-207ENST00000624931 ARHGEF2Q92974 986 aaKnown RBP18.62■□□□□ 0.57
PCF11-207ENST00000624931 FOXP3Q9BZS1 431 aa18.62■□□□□ 0.57
PCF11-207ENST00000624931 TMEM117Q9H0C3 514 aa18.62■□□□□ 0.57
PCF11-207ENST00000624931 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.62■□□□□ 0.576e-10■■■■■ 59.4
PCF11-207ENST00000624931 NOP53Q9NZM5 478 aaKnown RBP18.62■□□□□ 0.57
PCF11-207ENST00000624931 GTF2IRD1Q9UHL9 959 aa18.62■□□□□ 0.57
PCF11-207ENST00000624931 PTPRJQ12913 1337 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 CNTNAP2Q9UHC6 1331 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 GJB6O95452 261 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 PYGMP11217 842 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 MFAP3P55082 362 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 COPS2P61201 443 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 POU5F1BQ06416 359 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 CCDC15Q0P6D6 951 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 LHX8Q68G74 356 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 MPZL3Q6UWV2 235 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 TSHZ1Q6ZSZ6 1077 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 FAM71AQ8IYT1 594 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 ZNF564Q8TBZ8 553 aaPredicted RBP18.61■□□□□ 0.57
PCF11-207ENST00000624931 ELMO3Q96BJ8 720 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 FAM81BQ96LP2 452 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 CCDC77Q9BR77 488 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 CDT1Q9H211 546 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 PDZD7Q9H5P4 517 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 PTPRHQ9HD43 1115 aa18.61■□□□□ 0.57
PCF11-207ENST00000624931 RBAKQ9NYW8 714 aaPredicted RBP18.61■□□□□ 0.57
PCF11-207ENST00000624931 SMIM23A6NLE4 172 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 TSPAN1O60635 241 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 ATP5HO75947 161 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 RARAP10276 462 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 ARF4P18085 180 aaPredicted RBP18.6■□□□□ 0.57
PCF11-207ENST00000624931 CLNS1AP54105 237 aaKnown RBP18.6■□□□□ 0.57
PCF11-207ENST00000624931 OSTNP61366 133 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 MCL1Q07820 350 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 ARHGEF6Q15052 776 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 SIX1Q15475 284 aaPredicted RBP18.6■□□□□ 0.57
PCF11-207ENST00000624931 FAM187BQ17R55 369 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 RNF43Q68DV7 783 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 PPP1R21Q6ZMI0 780 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 ARHGEF18Q6ZSZ5 1173 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 ZNF410Q86VK4 478 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 TMEM192Q8IY95 271 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms