RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 SFSWAPQ12872 951 aaKnown RBP9.55□□□□□ -0.88
HDAC9-229ENST00000622668 ANKLE1Q8NAG6 615 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 FLCNQ8NFG4 579 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 GRK7Q8WTQ7 553 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 DPH5Q9H2P9 285 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 DHX33Q9H6R0 707 aaKnown RBP9.55□□□□□ -0.88
HDAC9-229ENST00000622668 IP6K2Q9UHH9 426 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 TRAV19A0A0A6YYK7 116 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 ENC1O14682 589 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 P4HA2O15460 535 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 EOMESO95936 686 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 ARHGEF7Q14155 803 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 DDR2Q16832 855 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 TAPT1Q6NXT6 567 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 MAMDC4Q6UXC1 1216 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 ALKBH8Q96BT7 664 aaKnown RBP9.55□□□□□ -0.88
HDAC9-229ENST00000622668 NIFKQ9BYG3 293 aaKnown RBP9.55□□□□□ -0.88
HDAC9-229ENST00000622668 NDRG2Q9UN36 371 aaKnown RBP9.55□□□□□ -0.88
HDAC9-229ENST00000622668 MRPL42Q9Y6G3 142 aaKnown RBP9.55□□□□□ -0.88
HDAC9-229ENST00000622668 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.55□□□□□ -0.88
HDAC9-229ENST00000622668 HSF2BPO75031 334 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 RTN3O95197 1032 aaPredicted RBP9.55□□□□□ -0.88
HDAC9-229ENST00000622668 C8AP07357 584 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 RFC2P35250 354 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 TARBP2Q15633 366 aaKnown RBP9.55□□□□□ -0.88
HDAC9-229ENST00000622668 RABGAP1LQ5R372 815 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 PID1Q7Z2X4 250 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 ECHDC2Q86YB7 292 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 NKX2-4Q9H2Z4 354 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 KCNK9Q9NPC2 374 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.55□□□□□ -0.88
HDAC9-229ENST00000622668 TSPAN16Q9UKR8 245 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 CACNA1GO43497 2377 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 PKD1L3Q7Z443 1732 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 ZMYM2Q9UBW7 1377 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 SOWAHDA6NJG2 315 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 TSPAN1O60635 241 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 CA3P07451 260 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 IQCF3P0C7M6 154 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 CXCR5P32302 372 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 ADIGQ0VDE8 80 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 ST3GAL1Q11201 340 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 THOC5Q13769 683 aaKnown RBP9.54□□□□□ -0.88
HDAC9-229ENST00000622668 TRIP13Q15645 432 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-229ENST00000622668 HEATR6Q6AI08 1181 aaKnown RBP9.54□□□□□ -0.88
HDAC9-229ENST00000622668 MAB21L3Q8N8X9 362 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 KREMEN2Q8NCW0 462 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 TATDN2Q93075 761 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 KLHL11Q9NVR0 708 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 ARL5CA6NH57 179 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 SLC9A3R1O14745 358 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-229ENST00000622668 MAP3K7O43318 606 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 NDUFA10O95299 355 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 ATF2P15336 505 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 PTPN1P18031 435 aaKnown RBP9.54□□□□□ -0.88
HDAC9-229ENST00000622668 GJA8P48165 433 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 ZC3H18Q86VM9 953 aaKnown RBP9.54□□□□□ -0.88
HDAC9-229ENST00000622668 FAM131BQ86XD5 332 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 VSTM4Q8IW00 320 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 TMA16Q96EY4 203 aaKnown RBP9.54□□□□□ -0.88
HDAC9-229ENST00000622668 FAM84AQ96KN4 292 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 METTL5Q9NRN9 209 aaKnown RBP9.54□□□□□ -0.88
HDAC9-229ENST00000622668 PCDHA13Q9Y5I0 950 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 F8W8V4 182 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 CLGNO14967 610 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 LYPLA2O95372 231 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 CCDC130P13994 396 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 BST2Q10589 180 aaKnown RBP9.54□□□□□ -0.88
HDAC9-229ENST00000622668 UBXN2BQ14CS0 331 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 POLD3Q15054 466 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-229ENST00000622668 GPR158Q5T848 1215 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 LGSNQ5TDP6 509 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 PRSS55Q6UWB4 352 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-229ENST00000622668 CEP128Q6ZU80 1094 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 TAOK1Q7L7X3 1001 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 TMCO2Q7Z6W1 182 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-229ENST00000622668 FAM228AQ86W67 206 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 C17orf53Q8N3J3 647 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-229ENST00000622668 POF1BQ8WVV4 589 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 MTMR8Q96EF0 704 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 RBM41Q96IZ5 413 aaKnown RBP9.54□□□□□ -0.88
HDAC9-229ENST00000622668 SLC7A5P2Q9GIP4 190 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 PPP2R2CQ9Y2T4 447 aa9.54□□□□□ -0.88
HDAC9-229ENST00000622668 UQCRHLA0A096LP55 91 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 EEF2KO00418 725 aaKnown RBP9.53□□□□□ -0.88
HDAC9-229ENST00000622668 ATP5C1P36542 298 aaKnown RBP9.53□□□□□ -0.88
HDAC9-229ENST00000622668 PPARGP37231 505 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-229ENST00000622668 SARSP49591 514 aaKnown RBP9.53□□□□□ -0.88
HDAC9-229ENST00000622668 C10orf76Q5T2E6 689 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 HECTD3Q5T447 861 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 MFSD5Q6N075 450 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 KIAA1324Q6UXG2 1013 aaKnown RBP9.53□□□□□ -0.88
HDAC9-229ENST00000622668 CCDC170Q8IYT3 715 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 ATPAF2Q8N5M1 289 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 RAB3IL1Q8TBN0 382 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 ZNF507Q8TCN5 953 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 B3GALT6Q96L58 329 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 PRDM12Q9H4Q4 367 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 PCDHB8Q9UN66 801 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 OR6C75A6NL08 312 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms