RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 LIFRP42702 1097 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 AFMP43652 599 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 BRCC3P46736 316 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 QARSP47897 775 aaKnown RBP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 AFF3P51826 1226 aaKnown RBP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 ARPP19P56211 112 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 BNC1Q01954 994 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 GRIN1Q05586 938 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 MBTD1Q05BQ5 628 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 FAM160A1Q05DH4 1040 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 VEPH1Q14D04 833 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 NCAPHQ15003 741 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 EML3Q32P44 896 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 PRR16Q569H4 304 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 STXBP5Q5T5C0 1151 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 TRIM68Q6AZZ1 485 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 SDE2Q6IQ49 451 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 ZNF280DQ6N043 979 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 CCDC81Q6ZN84 652 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 USP49Q70CQ1 688 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 CYB5R4Q7L1T6 521 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 MIER3Q7Z3K6 550 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 ZNF589Q86UQ0 364 aaPredicted RBP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 C4orf19Q8IY42 314 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 SLC34A3Q8N130 599 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 DEFB119Q8N690 84 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 ALLCQ8N6M5 410 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 FANCBQ8NB91 859 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 HASPINQ8TF76 798 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 C2orf15Q8WU43 125 aaKnown RBP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 HMGB4Q8WW32 186 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 KCNE4Q8WWG9 221 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 PIBF1Q8WXW3 757 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 DDX12PQ92771 950 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 TMEM143Q96AN5 459 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 LENG9Q96B70 501 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 CPB2Q96IY4 423 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 CEP170P1Q96L14 293 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 HSPA12BQ96MM6 686 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 SLC46A1Q96NT5 459 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 GCNAQ96QF7 691 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 MMS19Q96T76 1030 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 POLR3CQ9BUI4 534 aaPredicted RBP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 NUP58Q9BVL2 599 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 TEKT3Q9BXF9 490 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 TRIM4Q9C037 500 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 SLC25A18Q9H1K4 315 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 ADNPQ9H2P0 1102 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 LINC00597Q9H2U6 94 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 TMEM206Q9H813 350 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 POLR1BQ9H9Y6 1135 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 IL21RQ9HBE5 538 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 CD248Q9HCU0 757 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 THSD1Q9NS62 852 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 PRMT7Q9NVM4 692 aaPredicted RBP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 CUEDC1Q9NWM3 386 aaPredicted RBP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 GEMIN8Q9NWZ8 242 aaKnown RBP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 BARHL2Q9NY43 387 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 GMIPQ9P107 970 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 FTSJ1Q9UET6 329 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 ADAMTS1Q9UHI8 967 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 CIZ1Q9ULV3 898 aaPredicted RBP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 CLCA2Q9UQC9 943 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 BTBD3Q9Y2F9 522 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 FNDC3AQ9Y2H6 1198 aaKnown RBP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 YIPF1Q9Y548 306 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 U3KPZ7 1027 aaPredicted RBP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 KIAA1671Q9BY89 1806 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 CENPEQ02224 2701 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 LOXHD1Q8IVV2 1947 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 BAZ2AQ9UIF9 1905 aaKnown RBP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 SHROOM3Q8TF72 1996 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 KAT6AQ92794 2004 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 GOLGA4Q13439 2230 aaKnown RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 A0A1B0GTQ1 180 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 A0A1W2PQF6 199 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 TCRBV21S2A2A0A5A6 115 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 VPS37CA5D8V6 355 aaPredicted RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 TBC1D3BA6NDS4 549 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 HIP1O00291 1037 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 ACKR2O00590 384 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 SLC9A3R1O14745 358 aaPredicted RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 TRIM66O15016 1216 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 N4BP3O15049 544 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 NPC1O15118 1278 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 TBX3O15119 743 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 YKT6O15498 198 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 EFSO43281 561 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 LZTS3O60299 673 aaPredicted RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 GAS7O60861 476 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 PPFIA2O75334 1257 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 DGAT1O75907 488 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 KAT7O95251 611 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 VNN2O95498 520 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 NPTXRO95502 500 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 KLF8O95600 359 aaPredicted RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 DDAH2O95865 285 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 MT-CO3P00414 261 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 IGLV3-19P01714 112 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 APODP05090 189 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms