RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 GCNT4Q9P109 453 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 MAFFQ9ULX9 164 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 SLC27A5Q9Y2P5 690 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 MYH10P35580 1976 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 GTPBP10A4D1E9 387 aaKnown RBP15.28■□□□□ 0.04
CBWD3-217ENST00000621474 CILPO75339 1184 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 SOAT2O75908 522 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 ATP1A3P13637 1013 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 NDST1P52848 882 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 TSPY1Q01534 308 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 APBA1Q02410 837 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 LRMPQ12912 555 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 ORC1Q13415 861 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 VWA3BQ502W6 1294 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 WDR44Q5JSH3 913 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 PPM1LQ5SGD2 360 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 PHLDB3Q6NSJ2 640 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 DPY19L2P1Q6NXN4 242 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 CCDC149Q6ZUS6 474 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 RTL10Q7L3V2 364 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 DCP1BQ8IZD4 617 aaKnown RBP15.28■□□□□ 0.04
CBWD3-217ENST00000621474 UBR7Q8N806 425 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 B3GALNT2Q8NCR0 500 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 EHBP1Q8NDI1 1231 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 KAT5Q92993 513 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 PCED1BQ96HM7 432 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 CRACR2AQ9BSW2 395 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 NAT10Q9H0A0 1025 aaKnown RBP15.28■□□□□ 0.04
CBWD3-217ENST00000621474 CYP3A43Q9HB55 503 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 TMEM30AQ9NV96 361 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 HSFX1Q9UBD0 423 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 MAGEC2Q9UBF1 373 aaPredicted RBP15.28■□□□□ 0.04
CBWD3-217ENST00000621474 YIPF1Q9Y548 306 aa15.28■□□□□ 0.04
CBWD3-217ENST00000621474 PRRG1O14668 218 aa15.27■□□□□ 0.03
CBWD3-217ENST00000621474 CCL16O15467 120 aa15.27■□□□□ 0.03
CBWD3-217ENST00000621474 HNRNPA1P09651 372 aaKnown RBP eCLIP15.27■□□□□ 0.03
CBWD3-217ENST00000621474 PRKCSHP14314 528 aaPredicted RBP15.27■□□□□ 0.03
CBWD3-217ENST00000621474 PTPN1P18031 435 aaKnown RBP15.27■□□□□ 0.03
CBWD3-217ENST00000621474 ATF6P18850 670 aa15.27■□□□□ 0.03
CBWD3-217ENST00000621474 SLC9A1P19634 815 aa15.27■□□□□ 0.03
CBWD3-217ENST00000621474 SMARCB1Q12824 385 aa15.27■□□□□ 0.03
CBWD3-217ENST00000621474 CUL2Q13617 745 aa15.27■□□□□ 0.03
CBWD3-217ENST00000621474 CBX2Q14781 532 aaPredicted RBP15.27■□□□□ 0.03
CBWD3-217ENST00000621474 CFAP221Q4G0U5 840 aa15.27■□□□□ 0.03
CBWD3-217ENST00000621474 TRIM65Q6PJ69 517 aa15.27■□□□□ 0.03
CBWD3-217ENST00000621474 ARHGEF19Q8IW93 802 aa15.27■□□□□ 0.03
CBWD3-217ENST00000621474 CCDC150Q8NCX0 1101 aa15.27■□□□□ 0.03
CBWD3-217ENST00000621474 MYCBPAPQ8TBZ2 947 aa15.27■□□□□ 0.03
CBWD3-217ENST00000621474 SPPL2BQ8TCT7 592 aa15.27■□□□□ 0.03
CBWD3-217ENST00000621474 C2orf15Q8WU43 125 aaKnown RBP15.27■□□□□ 0.03
CBWD3-217ENST00000621474 MYLPFQ96A32 169 aa15.27■□□□□ 0.03
CBWD3-217ENST00000621474 INTS2Q9H0H0 1204 aaKnown RBP15.27■□□□□ 0.03
CBWD3-217ENST00000621474 POMKQ9H5K3 350 aa15.27■□□□□ 0.03
CBWD3-217ENST00000621474 CISHQ9NSE2 258 aa15.27■□□□□ 0.03
CBWD3-217ENST00000621474 ABI2Q9NYB9 513 aaPredicted RBP15.27■□□□□ 0.03
CBWD3-217ENST00000621474 TAB2Q9NYJ8 693 aa15.27■□□□□ 0.03
CBWD3-217ENST00000621474 CEP72Q9P209 647 aa15.27■□□□□ 0.03
CBWD3-217ENST00000621474 ZNF638Q14966 1978 aaKnown RBP15.27■□□□□ 0.03
CBWD3-217ENST00000621474 OBSL1O75147 1896 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 NCOR1O75376 2440 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 LRRC10BA6NIK2 292 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 SPDYE4A6NLX3 237 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 POU2F2P09086 479 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 CD58P19256 250 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 ELF1P32519 619 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 KCNMA1Q12791 1236 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 TWF1Q12792 350 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 CETN1Q12798 172 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 NFE2Q16621 373 aaPredicted RBP15.26■□□□□ 0.03
CBWD3-217ENST00000621474 AAK1Q2M2I8 961 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 MDH1BQ5I0G3 518 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 PAQR9Q6ZVX9 377 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 ACOT1Q86TX2 421 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 UNC93AQ86WB7 457 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 CRYBG2Q8N1P7 616 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 SMG7Q92540 1137 aaKnown RBP15.26■□□□□ 0.03
CBWD3-217ENST00000621474 ELOVL4Q9GZR5 314 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 CBX8Q9HC52 389 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 SIX2Q9NPC8 291 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 HCFC1R1Q9NWW0 138 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 LIMA1Q9UHB6 759 aaKnown RBP15.26■□□□□ 0.03
CBWD3-217ENST00000621474 PCDHB5Q9Y5E4 795 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 DENND4CQ5VZ89 1909 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 PATJQ8NI35 1801 aa15.26■□□□□ 0.03
CBWD3-217ENST00000621474 NRG2O14511 850 aaPredicted RBP15.25■□□□□ 0.03
CBWD3-217ENST00000621474 HAPLN1P10915 354 aaPredicted RBP15.25■□□□□ 0.03
CBWD3-217ENST00000621474 ACO1P21399 889 aaKnown RBP15.25■□□□□ 0.03
CBWD3-217ENST00000621474 CYP2F1P24903 491 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 PON1P27169 355 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 GPR15P49685 360 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 CACNA2D1P54289 1103 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 PUS10Q3MIT2 529 aaKnown RBP15.25■□□□□ 0.03
CBWD3-217ENST00000621474 CES5AQ6NT32 575 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 ELMSAN1Q6PJG2 1045 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 RRAGAQ7L523 313 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 LUZP1Q86V48 1076 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 C12orf29Q8N999 325 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 FUBP3Q96I24 572 aaKnown RBP eCLIP15.25■□□□□ 0.03
CBWD3-217ENST00000621474 KREMEN1Q96MU8 473 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 NT5C1BQ96P26 610 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms