RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 TMEM132DQ14C87 1099 aa13.22□□□□□ -0.29
TNFAIP3-211ENST00000621150 ZNF699Q32M78 642 aa13.22□□□□□ -0.29
TNFAIP3-211ENST00000621150 PLEKHG4Q58EX7 1191 aa13.22□□□□□ -0.29
TNFAIP3-211ENST00000621150 APBB1IPQ7Z5R6 666 aaPredicted RBP13.22□□□□□ -0.29
TNFAIP3-211ENST00000621150 SPRED2Q7Z698 418 aa13.22□□□□□ -0.29
TNFAIP3-211ENST00000621150 FAM228AQ86W67 206 aa13.22□□□□□ -0.29
TNFAIP3-211ENST00000621150 CREG2Q8IUH2 290 aa13.22□□□□□ -0.29
TNFAIP3-211ENST00000621150 CEP112Q8N8E3 955 aa13.22□□□□□ -0.29
TNFAIP3-211ENST00000621150 RBBP8NLQ8NC74 664 aaPredicted RBP13.22□□□□□ -0.29
TNFAIP3-211ENST00000621150 ZMAT2Q96NC0 199 aaKnown RBP13.22□□□□□ -0.29
TNFAIP3-211ENST00000621150 ZBED2Q9BTP6 218 aa13.22□□□□□ -0.29
TNFAIP3-211ENST00000621150 CCDC94Q9BW85 323 aaPredicted RBP13.22□□□□□ -0.29
TNFAIP3-211ENST00000621150 OSGEPQ9NPF4 335 aa13.22□□□□□ -0.29
TNFAIP3-211ENST00000621150 CNTN3Q9P232 1028 aa13.22□□□□□ -0.29
TNFAIP3-211ENST00000621150 COG5Q9UP83 839 aa13.22□□□□□ -0.29
TNFAIP3-211ENST00000621150 BDP1A6H8Y1 2624 aa13.22□□□□□ -0.29
TNFAIP3-211ENST00000621150 TMCO5BA8MYB1 307 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 SRGAP2O75044 1071 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 CYP1A2P05177 515 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 RPLP2P05387 115 aaKnown RBP13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 CTSHP09668 335 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 TCP1P17987 556 aaKnown RBP13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 COL19A1Q14993 1142 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 IFI16Q16666 785 aaKnown RBP13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 ACAD10Q6JQN1 1059 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 TMEM270Q6UE05 265 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 SLC35G2Q8TBE7 412 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 ARNTL2Q8WYA1 636 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 CTNNBL1Q8WYA6 563 aaPredicted RBP13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 PIK3R5Q8WYR1 880 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 OSBPL9Q96SU4 736 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 ZSWIM1Q9BR11 485 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 NXF3Q9H4D5 531 aaKnown RBP13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 CISHQ9NSE2 258 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 SNTG2Q9NY99 539 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 DCTN4Q9UJW0 460 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 ITGA11Q9UKX5 1188 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 NOC2LQ9Y3T9 749 aaKnown RBP13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 HYOU1Q9Y4L1 999 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 PCDHB4Q9Y5E5 795 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 TRPV2Q9Y5S1 764 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 CDY2AQ9Y6F7 541 aa13.21□□□□□ -0.29
TNFAIP3-211ENST00000621150 PDE2AO00408 941 aaPredicted RBP13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 NCK2O43639 380 aa13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 CHRNA1P02708 482 aa13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 ITGB3P05106 788 aa13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 CFHP08603 1231 aa13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 POU3F3P20264 500 aaPredicted RBP13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 ABCB4P21439 1286 aa13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 GPC5P78333 572 aa13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 CENPCQ03188 943 aa13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 MRPL58Q14197 206 aaKnown RBP13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 ERCC6LQ2NKX8 1250 aa13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 RHOT2Q8IXI1 618 aa13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 MNS1Q8NEH6 495 aa13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 COG1Q8WTW3 980 aa13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 RAD9AQ99638 391 aa13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 SDCBP2Q9H190 292 aa13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 FAM124BQ9H5Z6 455 aaPredicted RBP13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 SEPT11Q9NVA2 429 aaKnown RBP13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 GTF3C4Q9UKN8 822 aa13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 POLIQ9UNA4 740 aa13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 PIN4Q9Y237 131 aaKnown RBP13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 HES2Q9Y543 173 aa13.21□□□□□ -0.3
TNFAIP3-211ENST00000621150 CITO14578 2027 aa13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 NLRC5Q86WI3 1866 aa13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 SCAMP3O14828 347 aaKnown RBP13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 ZNF185O15231 689 aa13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 BUB1BO60566 1050 aaPredicted RBP13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 RECQL4O94761 1208 aa13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 FTCDO95954 541 aa13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 GNA15P30679 374 aa13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 GUCY2FP51841 1108 aa13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 NOMO3P69849 1222 aa13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 ELF2Q15723 593 aa13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 FAM26DQ5JW98 314 aa13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 FAM117BQ6P1L5 589 aa13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 TRIM72Q6ZMU5 477 aa13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 NT5DC3Q86UY8 548 aa13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 SMG8Q8ND04 991 aaKnown RBP13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 WHAMMQ8TF30 809 aa13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 TSPAN18Q96SJ8 248 aa13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 MMS19Q96T76 1030 aa13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 MTCH2Q9Y6C9 303 aa13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 V9GYY5 206 aaPredicted RBP13.2□□□□□ -0.3
TNFAIP3-211ENST00000621150 SMAPO00193 183 aa13.19□□□□□ -0.3
TNFAIP3-211ENST00000621150 CES2O00748 559 aa13.19□□□□□ -0.3
TNFAIP3-211ENST00000621150 KCNE1P15382 129 aa13.19□□□□□ -0.3
TNFAIP3-211ENST00000621150 POLR2BP30876 1174 aaKnown RBP13.19□□□□□ -0.3
TNFAIP3-211ENST00000621150 CDH5P33151 784 aaPredicted RBP13.19□□□□□ -0.3
TNFAIP3-211ENST00000621150 NAP1L1P55209 391 aaKnown RBP13.19□□□□□ -0.3
TNFAIP3-211ENST00000621150 RBP5P82980 135 aa13.19□□□□□ -0.3
TNFAIP3-211ENST00000621150 ITIH3Q06033 890 aa13.19□□□□□ -0.3
TNFAIP3-211ENST00000621150 PTP4A2Q12974 167 aa13.19□□□□□ -0.3
TNFAIP3-211ENST00000621150 ZNF667Q5HYK9 610 aa13.19□□□□□ -0.3
TNFAIP3-211ENST00000621150 MICALL1Q8N3F8 863 aa13.19□□□□□ -0.3
TNFAIP3-211ENST00000621150 ZNF606Q8WXB4 792 aa13.19□□□□□ -0.3
TNFAIP3-211ENST00000621150 SEPT8Q92599 483 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms