RNA–Protein interactions for RNA: ENST00000620879.4

GTF2I-218, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2I, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-218ENST00000620879 MOSPD1Q9UJG1 213 aa12.86□□□□□ -0.35
GTF2I-218ENST00000620879 AFDNP55196 1824 aaKnown RBP12.86□□□□□ -0.35
GTF2I-218ENST00000620879 ZC3H4Q9UPT8 1303 aaKnown RBP12.86□□□□□ -0.35
GTF2I-218ENST00000620879 TNFSF9P41273 254 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 ITGA8P53708 1063 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 RBBP5Q15291 538 aaKnown RBP12.85□□□□□ -0.35
GTF2I-218ENST00000620879 SKIV2LQ15477 1246 aaKnown RBP12.85□□□□□ -0.35
GTF2I-218ENST00000620879 BOLA3Q53S33 107 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 BEND6Q5SZJ8 279 aaPredicted RBP12.85□□□□□ -0.35
GTF2I-218ENST00000620879 NOP9Q86U38 636 aaKnown RBP12.85□□□□□ -0.35
GTF2I-218ENST00000620879 TTC30AQ86WT1 665 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 TRIM42Q8IWZ5 723 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 C4orf33Q8N1A6 199 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 AGR3Q8TD06 166 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 ASIC4Q96FT7 647 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 PGLYRP2Q96PD5 576 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 TRIM56Q9BRZ2 755 aaKnown RBP12.85□□□□□ -0.35
GTF2I-218ENST00000620879 TSPAN16Q9UKR8 245 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 ZSCAN5CA6NGD5 496 aaPredicted RBP12.85□□□□□ -0.35
GTF2I-218ENST00000620879 ODC1P11926 461 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 PAMP19021 973 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 IL31Q6EBC2 164 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 TAF2Q6P1X5 1199 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 CD302Q8IX05 232 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 FAM172AQ8WUF8 416 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.85□□□□□ -0.35
GTF2I-218ENST00000620879 ADAMTSL3P82987 1691 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 IGKV6D-41A0A0C4DH26 115 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 S100BP04271 92 aaPredicted RBP12.85□□□□□ -0.35
GTF2I-218ENST00000620879 MCF2P10911 925 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 COILP38432 576 aaPredicted RBP12.85□□□□□ -0.35
GTF2I-218ENST00000620879 MDH1BQ5I0G3 518 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 MIIPQ5JXC2 388 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 PHLDB3Q6NSJ2 640 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 IRF2BP1Q8IU81 584 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 LRRN4CLQ8ND94 238 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 SOCS4Q8WXH5 440 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 ARHGEF26Q96DR7 871 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 TRIM62Q9BVG3 475 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 ZC3H7BQ9UGR2 993 aaKnown RBP12.85□□□□□ -0.35
GTF2I-218ENST00000620879 XPO7Q9UIA9 1087 aaKnown RBP12.85□□□□□ -0.35
GTF2I-218ENST00000620879 MX2P20592 715 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 CASP2P42575 452 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 GTF2BQ00403 316 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 KCNMA1Q12791 1236 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 NAA25Q14CX7 972 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 OR5B17Q8NGF7 314 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 CDC26Q8NHZ8 85 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 NMRK2Q9NPI5 230 aa12.85□□□□□ -0.35
GTF2I-218ENST00000620879 E2F8A0AVK6 867 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 HSPA4LO95757 839 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 ITIH2P19823 946 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 NNMTP40261 264 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 NSUN2Q08J23 767 aaKnown RBP eCLIP12.84□□□□□ -0.35
GTF2I-218ENST00000620879 SLC29A2Q14542 456 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 TRIM67Q6ZTA4 783 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 EDEM1Q92611 657 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 WNK4Q96J92 1243 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 DDX43Q9NXZ2 648 aaKnown RBP12.84□□□□□ -0.35
GTF2I-218ENST00000620879 MYPNQ86TC9 1320 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 C3orf70A6NLC5 250 aaPredicted RBP12.84□□□□□ -0.35
GTF2I-218ENST00000620879 ETFBP38117 255 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 SLC35G1Q2M3R5 365 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 CHADLQ6NUI6 762 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 ELMSAN1Q6PJG2 1045 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 SCUBE3Q8IX30 993 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 ATPAF2Q8N5M1 289 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 SHCBP1Q8NEM2 672 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 LBHD1Q9BQE6 289 aaPredicted RBP12.84□□□□□ -0.35
GTF2I-218ENST00000620879 ASB7Q9H672 318 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 WDCPQ9H6R7 721 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 KRT82Q9NSB4 513 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 TAS2R14Q9NYV8 317 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 ABCC6O95255 1503 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 RNF225M0QZC1 329 aaPredicted RBP12.84□□□□□ -0.35
GTF2I-218ENST00000620879 GTF2A1P52655 376 aaPredicted RBP12.84□□□□□ -0.35
GTF2I-218ENST00000620879 HIBCHQ6NVY1 386 aaPredicted RBP12.84□□□□□ -0.35
GTF2I-218ENST00000620879 EFHBQ8N7U6 833 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 FBXO25Q8TCJ0 367 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 ADAM2Q99965 735 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 PPARGC1AQ9UBK2 798 aaKnown RBP12.84□□□□□ -0.35
GTF2I-218ENST00000620879 SDK1Q7Z5N4 2213 aa12.84□□□□□ -0.35
GTF2I-218ENST00000620879 COL1A1P02452 1464 aaPredicted RBP12.84□□□□□ -0.35
GTF2I-218ENST00000620879 FLT3LGP49771 235 aa12.83□□□□□ -0.35
GTF2I-218ENST00000620879 GCNT1Q02742 428 aa12.83□□□□□ -0.35
GTF2I-218ENST00000620879 MAP2K5Q13163 448 aa12.83□□□□□ -0.35
GTF2I-218ENST00000620879 MAPK7Q13164 816 aa12.83□□□□□ -0.35
GTF2I-218ENST00000620879 KCTD19Q17RG1 926 aaPredicted RBP12.83□□□□□ -0.35
GTF2I-218ENST00000620879 CTXN3Q4LDR2 81 aa12.83□□□□□ -0.35
GTF2I-218ENST00000620879 C3orf62Q6ZUJ4 267 aa12.83□□□□□ -0.35
GTF2I-218ENST00000620879 ZIM3Q96PE6 472 aa12.83□□□□□ -0.35
GTF2I-218ENST00000620879 HMX1Q9NP08 348 aaPredicted RBP12.83□□□□□ -0.35
GTF2I-218ENST00000620879 TPX2Q9ULW0 747 aaKnown RBP12.83□□□□□ -0.35
GTF2I-218ENST00000620879 STK25O00506 426 aa12.83□□□□□ -0.36
GTF2I-218ENST00000620879 PAPOLAP51003 745 aaKnown RBP12.83□□□□□ -0.36
GTF2I-218ENST00000620879 BCAT1P54687 386 aa12.83□□□□□ -0.36
GTF2I-218ENST00000620879 CLEC16AQ2KHT3 1053 aa12.83□□□□□ -0.36
GTF2I-218ENST00000620879 DEFB115Q30KQ5 88 aa12.83□□□□□ -0.36
GTF2I-218ENST00000620879 KLC3Q6P597 504 aa12.83□□□□□ -0.36
GTF2I-218ENST00000620879 MCOLN2Q8IZK6 566 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms