RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 PPIDQ08752 370 aaKnown RBP7.46□□□□□ -1.22
COLCA1-205ENST00000620864 BROXQ5VW32 411 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 GALNT4Q8N4A0 578 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 SDR42E1Q8WUS8 393 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 MMP19Q99542 508 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 MNTQ99583 582 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 INTS13Q9NVM9 706 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 CRNNQ9UBG3 495 aaPredicted RBP7.46□□□□□ -1.22
COLCA1-205ENST00000620864 STARD13Q9Y3M8 1113 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 A0A1W2PRG6 482 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 CYP2B6P20813 491 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 SCUBE1Q8IWY4 988 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 ULK2Q8IYT8 1036 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 EFHD2Q96C19 240 aaPredicted RBP7.46□□□□□ -1.22
COLCA1-205ENST00000620864 UNC45AQ9H3U1 944 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 MRPL39Q9NYK5 338 aaKnown RBP7.46□□□□□ -1.22
COLCA1-205ENST00000620864 ATP6V1HQ9UI12 483 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 MLNP12872 115 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 NDUFV2P19404 249 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 LIFRP42702 1097 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 PRKCQQ04759 706 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 Q4G0T1 1027 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 C12orf60Q5U649 245 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 IRGCQ6NXR0 463 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 MZT2AQ6P582 158 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 B3GNT6Q6ZMB0 384 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 NLRP10Q86W26 655 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 HAVCR1Q96D42 359 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 PLEKHA5Q9HAU0 1116 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 RGS18Q9NS28 235 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 PCDHGA3Q9Y5H0 932 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 A0A087WXM4 84 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 SSU72P8A0A1W2PR75 194 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 ABLIM1O14639 778 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 PRPF4O43172 522 aaKnown RBP eCLIP7.45□□□□□ -1.22
COLCA1-205ENST00000620864 DYNC1LI2O43237 492 aaPredicted RBP7.45□□□□□ -1.22
COLCA1-205ENST00000620864 SCRN3Q0VDG4 424 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 C6orf10Q5SRN2 563 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 UGT3A1Q6NUS8 523 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 NARS2Q96I59 477 aaKnown RBP7.45□□□□□ -1.22
COLCA1-205ENST00000620864 DNAJC7Q99615 494 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 CCDC28BQ9BUN5 200 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 VTA1Q9NP79 307 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 TOPORSQ9NS56 1045 aaPredicted RBP7.45□□□□□ -1.22
COLCA1-205ENST00000620864 EMC3Q9P0I2 261 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 FBXO9Q9UK97 447 aaPredicted RBP7.45□□□□□ -1.22
COLCA1-205ENST00000620864 CLCA2Q9UQC9 943 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 PIPSLA2A3N6 862 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 WWP2O00308 870 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 ADCY6O43306 1168 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 POTEIP0CG38 1075 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 NPR3P17342 541 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 FCGRTP55899 365 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 CYP27A1Q02318 531 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 LGALS3BPQ08380 585 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 PTK6Q13882 451 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 RWDD4Q6NW29 188 aaKnown RBP7.45□□□□□ -1.22
COLCA1-205ENST00000620864 CCNI2Q6ZMN8 369 aaPredicted RBP7.45□□□□□ -1.22
COLCA1-205ENST00000620864 MIEF2Q96C03 454 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 ARHGEF26Q96DR7 871 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 ECSITQ9BQ95 431 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 TIPINQ9BVW5 301 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 CCL15-CCL14A0A0B4J2E2 113 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 CCDC162PA2VCL2 907 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 USP17L12C9JPN9 530 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 USP17L21D6R901 530 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 CHL1O00533 1208 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 TSC22D2O75157 780 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 RTN2O75298 545 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 KLHL18O94889 574 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 CCL15Q16663 113 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 OSCP1Q8WVF1 389 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 RFT1Q96AA3 541 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 HES6Q96HZ4 224 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 PNMA5Q96PV4 448 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 HDHD2Q9H0R4 259 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 SCAF8Q9UPN6 1271 aaKnown RBP7.45□□□□□ -1.22
COLCA1-205ENST00000620864 BTBD3Q9Y2F9 522 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 hCG_1642624A0A1W2PR95 340 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 PIK3CDO00329 1044 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 ATP6V1B1P15313 513 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 GJA8P48165 433 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 HSD17B4P51659 736 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 RAB15P59190 212 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 OLR1P78380 273 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 CACHD1Q5VU97 1274 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 CDC73Q6P1J9 531 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 BARGINQ6ZT62 677 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 BDH2Q9BUT1 245 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 DHX36Q9H2U1 1008 aaKnown RBP7.45□□□□□ -1.22
COLCA1-205ENST00000620864 NGRNQ9NPE2 291 aaKnown RBP7.45□□□□□ -1.22
COLCA1-205ENST00000620864 TCOF1Q13428 1488 aaKnown RBP7.45□□□□□ -1.22
COLCA1-205ENST00000620864 A0A0B4J269 797 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 BAIAP3O94812 1187 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 PLCG1P19174 1290 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 ARSEP51690 589 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 CNTN1Q12860 1018 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 SNAPC2Q13487 334 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 TUBB3Q13509 450 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 DDR2Q16832 855 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms