RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 METTL5Q9NRN9 209 aaKnown RBP12.9□□□□□ -0.34
SPCS1-206ENST00000619898 R3HDM2Q9Y2K5 976 aaKnown RBP12.9□□□□□ -0.34
SPCS1-206ENST00000619898 GRAP2O75791 330 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 PDGFRAP16234 1089 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 OSBPP22059 807 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 CALB2P22676 271 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 SDC4P31431 198 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 CAP2P40123 477 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 CCNA1P78396 465 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 SGSM1Q2NKQ1 1148 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 RNF43Q68DV7 783 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 SESTD1Q86VW0 696 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 MAP4K3Q8IVH8 894 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 FITM2Q8N6M3 262 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 KIAA1683Q9H0B3 1180 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 RNPEPL1Q9HAU8 725 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 SHOC2Q9UQ13 582 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 PLIN4Q96Q06 1357 aa12.9□□□□□ -0.35
SPCS1-206ENST00000619898 MYH13Q9UKX3 1938 aa12.9□□□□□ -0.35
SPCS1-206ENST00000619898 SNRPAP09012 282 aaKnown RBP12.89□□□□□ -0.35
SPCS1-206ENST00000619898 MYL2P10916 166 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 SLC12A2P55011 1212 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 BIRC2Q13490 618 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 MIPOL1Q8TD10 442 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 STK32AQ8WU08 396 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 TEKT4Q8WW24 435 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 ZNF606Q8WXB4 792 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 ATG4CQ96DT6 458 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 TMEM109Q9BVC6 243 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 MAP3K6O95382 1288 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 HSPA4LO95757 839 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 UBTFL6P0CB48 400 aaPredicted RBP12.89□□□□□ -0.35
SPCS1-206ENST00000619898 ECHS1P30084 290 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 NFIL3Q16649 462 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 RABGAP1LQ5R372 815 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 LENG9Q96B70 501 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 ZBTB10Q96DT7 871 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 ZNF317Q96PQ6 595 aaPredicted RBP12.89□□□□□ -0.35
SPCS1-206ENST00000619898 WRNIP1Q96S55 665 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 PDCD2LQ9BRP1 358 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 APOL6Q9BWW8 343 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 C10orf88Q9H8K7 445 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 PCDH9Q9HC56 1237 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 C1QBPQ07021 282 aaKnown RBP12.89□□□□□ -0.35
SPCS1-206ENST00000619898 STX3Q13277 289 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 HIC1Q14526 733 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 RASSF3Q86WH2 238 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 NDUFAF2Q8N183 169 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 MAGEC3Q8TD91 643 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 E2F7Q96AV8 911 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 RMDN2Q96LZ7 410 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 MBOAT7Q96N66 472 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 TBC1D10AQ9BXI6 508 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 ACAD9Q9H845 621 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 DMAC2Q9NW81 257 aa12.89□□□□□ -0.35
SPCS1-206ENST00000619898 TRPA1O75762 1119 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 SH3BGRP55822 239 aaPredicted RBP12.88□□□□□ -0.35
SPCS1-206ENST00000619898 ACTR2P61160 394 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 RIPK1Q13546 671 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 CHI3L2Q15782 390 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 CRY2Q49AN0 593 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 DACT2Q5SW24 774 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 IL31RAQ8NI17 732 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 PIP4K2CQ8TBX8 421 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 SLC10A4Q96EP9 437 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 TMEM120AQ9BXJ8 343 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 STARD13Q9Y3M8 1113 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 TIAM2Q8IVF5 1701 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 PRKCBP05771 671 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 BGNP21810 368 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 HMGCS2P54868 508 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 BNIP1Q12981 228 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.88□□□□□ -0.35
SPCS1-206ENST00000619898 RSBN1LQ6PCB5 846 aaPredicted RBP12.88□□□□□ -0.35
SPCS1-206ENST00000619898 CDR2LQ86X02 465 aaPredicted RBP12.88□□□□□ -0.35
SPCS1-206ENST00000619898 LRRC6Q86X45 466 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 KATNAL2Q8IYT4 538 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 EMC1Q8N766 993 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 FHDC1Q9C0D6 1143 aaPredicted RBP12.88□□□□□ -0.35
SPCS1-206ENST00000619898 MTMR12Q9C0I1 747 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 DHX35Q9H5Z1 703 aaKnown RBP12.88□□□□□ -0.35
SPCS1-206ENST00000619898 WDR35Q9P2L0 1181 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 ACTL7BQ9Y614 415 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 IGLV3-22A0A075B6J6 115 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 F8VP50 259 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 TAS2R40P59535 323 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 COG7P83436 770 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 PRPF39Q86UA1 669 aaKnown RBP12.88□□□□□ -0.35
SPCS1-206ENST00000619898 SPIRE2Q8WWL2 714 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 DDX27Q96GQ7 796 aaKnown RBP12.88□□□□□ -0.35
SPCS1-206ENST00000619898 AGAP1Q9UPQ3 857 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 CICQ96RK0 1608 aaPredicted RBP12.88□□□□□ -0.35
SPCS1-206ENST00000619898 MYO5AQ9Y4I1 1855 aaKnown RBP12.88□□□□□ -0.35
SPCS1-206ENST00000619898 IREB2P48200 963 aaKnown RBP12.88□□□□□ -0.35
SPCS1-206ENST00000619898 SERPINB4P48594 390 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 STAT5BP51692 787 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 NLRP11P59045 1033 aaKnown RBP12.88□□□□□ -0.35
SPCS1-206ENST00000619898 IFRD2Q12894 506 aaPredicted RBP12.88□□□□□ -0.35
SPCS1-206ENST00000619898 ORC1Q13415 861 aa12.88□□□□□ -0.35
SPCS1-206ENST00000619898 MROH9Q5TGP6 573 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms