RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 DYNC1LI2O43237 492 aaPredicted RBP20.46■□□□□ 0.87
LAPTM4B-204ENST00000619747 KRT10P13645 584 aa20.46■□□□□ 0.87
LAPTM4B-204ENST00000619747 MDH1P40925 334 aaKnown RBP20.46■□□□□ 0.87
LAPTM4B-204ENST00000619747 AMHR2Q16671 573 aa20.46■□□□□ 0.87
LAPTM4B-204ENST00000619747 SLC5A9Q2M3M2 681 aa20.46■□□□□ 0.87
LAPTM4B-204ENST00000619747 ZNF667Q5HYK9 610 aa20.46■□□□□ 0.87
LAPTM4B-204ENST00000619747 PLEKHA7Q6IQ23 1121 aa20.46■□□□□ 0.87
LAPTM4B-204ENST00000619747 ZDHHC24Q6UX98 284 aa20.46■□□□□ 0.87
LAPTM4B-204ENST00000619747 TRIM72Q6ZMU5 477 aa20.46■□□□□ 0.87
LAPTM4B-204ENST00000619747 HOMEZQ8IX15 550 aa20.46■□□□□ 0.87
LAPTM4B-204ENST00000619747 UBR7Q8N806 425 aa20.46■□□□□ 0.87
LAPTM4B-204ENST00000619747 FEZF2Q8TBJ5 459 aa20.46■□□□□ 0.87
LAPTM4B-204ENST00000619747 TWNKQ96RR1 684 aa20.46■□□□□ 0.87
LAPTM4B-204ENST00000619747 SDCBP2Q9H190 292 aa20.46■□□□□ 0.87
LAPTM4B-204ENST00000619747 DNAJC17Q9NVM6 304 aaKnown RBP20.46■□□□□ 0.87
LAPTM4B-204ENST00000619747 GRHL1Q9NZI5 618 aa20.46■□□□□ 0.87
LAPTM4B-204ENST00000619747 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.46■□□□□ 0.87
LAPTM4B-204ENST00000619747 B4GALT4O60513 344 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 ZNF844Q08AG5 666 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 PPP2R5EQ16537 467 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 SLC10A6Q3KNW5 377 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 DENND1BQ6P3S1 775 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 OR6J1Q8NGC5 347 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 RRAGCQ9HB90 399 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 HOMER3Q9NSC5 361 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 PARVAQ9NVD7 372 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 PCYOX1Q9UHG3 505 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 FAM187AA6NFU0 413 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 H0YGN5 161 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 STRNO43815 780 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 SMNDC1O75940 238 aaKnown RBP eCLIP20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 UPP2O95045 317 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 HSPA6P17066 643 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 ACVR2BQ13705 512 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 SURF1Q15526 300 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 GRIK4Q16099 956 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 TXNRD3NBQ6F5E7 133 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 TINF2Q9BSI4 451 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 HES2Q9Y543 173 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 NFS1Q9Y697 457 aa20.45■□□□□ 0.86
LAPTM4B-204ENST00000619747 GOLGA6L10A6NI86 522 aa20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 ANP32DO95626 131 aa20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 OGDHQ02218 1023 aa20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 IFFO1Q0D2I5 559 aa20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 MARCH8Q5T0T0 291 aa20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 HIBCHQ6NVY1 386 aaPredicted RBP20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 ERICH1Q86X53 443 aa20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 PLVAPQ9BX97 442 aa20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 GGA2Q9UJY4 613 aa20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 FSCN2O14926 492 aa20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 POLR2BP30876 1174 aaKnown RBP20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 PSMC4P43686 418 aa20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 ELF3P78545 371 aaPredicted RBP20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 XRCC4Q13426 336 aa20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 QPCTQ16769 361 aa20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 TMEM35BQ8NCS4 154 aa20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 EBF2Q9HAK2 575 aa20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 ASIC3Q9UHC3 531 aa20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 CYTH4Q9UIA0 394 aa20.44■□□□□ 0.86
LAPTM4B-204ENST00000619747 TLDC2A0PJX2 215 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 EIF4E1BA6NMX2 242 aaKnown RBP20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 SHBGP04278 402 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 MYZAPP0CAP1 466 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 ATF7P17544 494 aaPredicted RBP20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 C1QBPQ07021 282 aaKnown RBP20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 GRM1Q13255 1194 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 CLUL1Q15846 466 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 DNAJC24Q6P3W2 148 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 EIF1ADQ8N9N8 165 aaKnown RBP20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 SEMA4AQ9H3S1 761 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 CDHR5Q9HBB8 845 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 AGAP1Q9UPQ3 857 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 C15orf41Q9Y2V0 281 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 PLXNA1Q9UIW2 1896 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 DCDC2CA8MYV0 355 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 MAGEB2O15479 319 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 ECEL1O95672 775 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 ITGBL1O95965 494 aaPredicted RBP20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 SLC1A1P43005 524 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 KRT17Q04695 432 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 ZNF252P-AS1Q0IIN9 211 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 RHOT1Q8IXI2 618 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 ATP6V1G3Q96LB4 118 aa20.43■□□□□ 0.86
LAPTM4B-204ENST00000619747 MMP3P08254 477 aa20.42■□□□□ 0.86
LAPTM4B-204ENST00000619747 GCLCP48506 637 aaPredicted RBP20.42■□□□□ 0.86
LAPTM4B-204ENST00000619747 SPRYD7Q5W111 196 aa20.42■□□□□ 0.86
LAPTM4B-204ENST00000619747 C2orf69Q8N8R5 385 aa20.42■□□□□ 0.86
LAPTM4B-204ENST00000619747 HAUS1Q96CS2 278 aa20.42■□□□□ 0.86
LAPTM4B-204ENST00000619747 G3BP2Q9UN86 482 aaKnown RBP20.42■□□□□ 0.86
LAPTM4B-204ENST00000619747 SCINQ9Y6U3 715 aa20.42■□□□□ 0.86
LAPTM4B-204ENST00000619747 PODXLO00592 558 aa20.42■□□□□ 0.86
LAPTM4B-204ENST00000619747 KRT71Q3SY84 523 aa20.42■□□□□ 0.86
LAPTM4B-204ENST00000619747 ODF2Q5BJF6 829 aa20.42■□□□□ 0.86
LAPTM4B-204ENST00000619747 ILDR2Q71H61 639 aa20.42■□□□□ 0.86
LAPTM4B-204ENST00000619747 PLEKHH3Q7Z736 793 aa20.42■□□□□ 0.86
LAPTM4B-204ENST00000619747 EMC1Q8N766 993 aa20.42■□□□□ 0.86
LAPTM4B-204ENST00000619747 DRAXINQ8NBI3 349 aaPredicted RBP20.42■□□□□ 0.86
LAPTM4B-204ENST00000619747 VCPIP1Q96JH7 1222 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms