RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 LARP6Q9BRS8 491 aaKnown RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 MRPL4Q9BYD3 311 aaKnown RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 GKN1Q9NS71 199 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 TDP1Q9NUW8 608 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 GCNT4Q9P109 453 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 STARD13Q9Y3M8 1113 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 SPAARA0A1B0GVQ0 90 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 FLRT2O43155 660 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 OLFM2O95897 454 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 HMGA1P17096 107 aaKnown RBP4.98□□□□□ -1.61
SNCA-213ENST00000618500 ATF6P18850 670 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 GABRR2P28476 465 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 OPRD1P41143 372 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 SSRP1Q08945 709 aaKnown RBP4.98□□□□□ -1.61
SNCA-213ENST00000618500 MTF1Q14872 753 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 EEF1DP3Q658K8 133 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 IGF2-ASQ6U949 168 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 DDX42Q86XP3 938 aaKnown RBP eCLIP4.98□□□□□ -1.61
SNCA-213ENST00000618500 MDGA1Q8NFP4 955 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 CADM4Q8NFZ8 388 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 DEPTORQ8TB45 409 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 SPIRE2Q8WWL2 714 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 BSNDQ8WZ55 320 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 OTUB2Q96DC9 234 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 ZNF419Q96HQ0 510 aaPredicted RBP4.98□□□□□ -1.61
SNCA-213ENST00000618500 FNBP1Q96RU3 617 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 NTPCRQ9BSD7 190 aaKnown RBP4.98□□□□□ -1.61
SNCA-213ENST00000618500 SLC46A2Q9BY10 475 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 CXCL16Q9H2A7 254 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 VPS54Q9P1Q0 977 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 UBQLN1Q9UMX0 589 aaKnown RBP4.98□□□□□ -1.61
SNCA-213ENST00000618500 FRYLO94915 3013 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 COL27A1Q8IZC6 1860 aaPredicted RBP4.98□□□□□ -1.61
SNCA-213ENST00000618500 ANO9A1A5B4 782 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 LRRIQ4A6NIV6 560 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 H0YCG3 227 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 GFRA2O00451 464 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 NPC1O15118 1278 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 CER1O95813 267 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 SPATA31C1P0DKV0 1188 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 CSH1P0DML2 217 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 CSH2P0DML3 217 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 CPB1P15086 417 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 RPS6KB1P23443 525 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 MAGEA11P43364 429 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 RHDQ02161 417 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 TMEM132AQ24JP5 1023 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 NCAPH2Q6IBW4 605 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 TMPRSS12Q86WS5 348 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 CHCHD4Q8N4Q1 142 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 MINDY1Q8N5J2 469 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 ST13P5Q8NFI4 369 aaPredicted RBP4.98□□□□□ -1.61
SNCA-213ENST00000618500 FOXJ1Q92949 421 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 SPATA17Q96L03 361 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 IFT74Q96LB3 600 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 ZMAT2Q96NC0 199 aaKnown RBP4.98□□□□□ -1.61
SNCA-213ENST00000618500 ACAP3Q96P50 834 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 CRISPLD1Q9H336 500 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 ATXN3LQ9H3M9 355 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 TOR4AQ9NXH8 423 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 CACNG4Q9UBN1 327 aa4.98□□□□□ -1.61
SNCA-213ENST00000618500 ASH1LQ9NR48 2969 aaKnown RBP4.97□□□□□ -1.61
SNCA-213ENST00000618500 SLC9A3R1O14745 358 aaPredicted RBP4.97□□□□□ -1.61
SNCA-213ENST00000618500 HOXC11O43248 304 aaPredicted RBP4.97□□□□□ -1.61
SNCA-213ENST00000618500 DFNA5O60443 496 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 CDKL5O76039 1030 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 MYBP10242 640 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 RPA1P27694 616 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 MARCKSP29966 332 aaPredicted RBP4.97□□□□□ -1.61
SNCA-213ENST00000618500 MCM4P33991 863 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 KIR2DL1P43626 348 aaPredicted RBP4.97□□□□□ -1.61
SNCA-213ENST00000618500 ABCG1P45844 678 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 UCNP55089 124 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 SLC7A9P82251 487 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 CTTNQ14247 550 aaKnown RBP4.97□□□□□ -1.61
SNCA-213ENST00000618500 INAVAQ3KP66 663 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 NT5DC4Q86YG4 428 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 RFFLQ8WZ73 363 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 PKMYT1Q99640 499 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 NRSN2Q9GZP1 204 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 RGL1Q9NZL6 768 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 EHD2Q9NZN4 543 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 RAXQ9Y2V3 346 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 CKAP5Q14008 2032 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 TRAV19A0A0A6YYK7 116 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 TTC26A0AVF1 554 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 TTLL13PA6NNM8 815 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 PATE3B3GLJ2 98 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 TADA3O75528 432 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 LARGE1O95461 756 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 ARSAP15289 507 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 PDIA3P30101 505 aaKnown RBP4.97□□□□□ -1.61
SNCA-213ENST00000618500 EIF2S3P41091 472 aaKnown RBP4.97□□□□□ -1.61
SNCA-213ENST00000618500 IFNAR2P48551 515 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 DHPSP49366 369 aaPredicted RBP4.97□□□□□ -1.61
SNCA-213ENST00000618500 TNK2Q07912 1038 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 SRSF1Q07955 248 aaKnown RBP eCLIP4.97□□□□□ -1.61
SNCA-213ENST00000618500 ILKQ13418 452 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 STXBP5Q5T5C0 1151 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 KIAA1211LQ6NV74 962 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms