RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 CCDC181Q5TID7 509 aa21.77■■□□□ 1.08
SDHA-220ENST00000617470 FAM109BQ6ICB4 259 aaPredicted RBP21.77■■□□□ 1.08
SDHA-220ENST00000617470 CHRDL2Q6WN34 429 aa21.77■■□□□ 1.08
SDHA-220ENST00000617470 RSPH1Q8WYR4 309 aa21.77■■□□□ 1.08
SDHA-220ENST00000617470 RAD9AQ99638 391 aa21.77■■□□□ 1.08
SDHA-220ENST00000617470 CTTNBP2NLQ9P2B4 639 aa21.77■■□□□ 1.08
SDHA-220ENST00000617470 TDRD15B5MCY1 1934 aaKnown RBP21.77■■□□□ 1.08
SDHA-220ENST00000617470 B4GALT3O60512 393 aa21.76■■□□□ 1.07
SDHA-220ENST00000617470 ZRANB2O95218 330 aaKnown RBP eCLIP21.76■■□□□ 1.07
SDHA-220ENST00000617470 ASPAP45381 313 aa21.76■■□□□ 1.07
SDHA-220ENST00000617470 OR1G1P47890 313 aa21.76■■□□□ 1.07
SDHA-220ENST00000617470 CLCNKBP51801 687 aa21.76■■□□□ 1.07
SDHA-220ENST00000617470 VSNL1P62760 191 aa21.76■■□□□ 1.07
SDHA-220ENST00000617470 CMTR2Q8IYT2 770 aaKnown RBP21.76■■□□□ 1.07
SDHA-220ENST00000617470 PAAF1Q9BRP4 392 aa21.76■■□□□ 1.07
SDHA-220ENST00000617470 PDCL3Q9H2J4 239 aa21.76■■□□□ 1.07
SDHA-220ENST00000617470 NRDE2Q9H7Z3 1164 aa21.76■■□□□ 1.07
SDHA-220ENST00000617470 RC3H2Q9HBD1 1191 aaKnown RBP21.76■■□□□ 1.07
SDHA-220ENST00000617470 ARGLU1Q9NWB6 273 aaPredicted RBP21.76■■□□□ 1.07
SDHA-220ENST00000617470 GTF3C4Q9UKN8 822 aa21.76■■□□□ 1.07
SDHA-220ENST00000617470 PDCD11Q14690 1871 aaKnown RBP21.76■■□□□ 1.07
SDHA-220ENST00000617470 FNDC1Q4ZHG4 1894 aaPredicted RBP21.76■■□□□ 1.07
SDHA-220ENST00000617470 DDX3YO15523 660 aaKnown RBP21.76■■□□□ 1.07
SDHA-220ENST00000617470 SEC31AO94979 1220 aaKnown RBP21.76■■□□□ 1.07
SDHA-220ENST00000617470 GNA15P30679 374 aa21.76■■□□□ 1.07
SDHA-220ENST00000617470 PAFAH1B1P43034 410 aa21.76■■□□□ 1.07
SDHA-220ENST00000617470 RBP5P82980 135 aa21.76■■□□□ 1.07
SDHA-220ENST00000617470 ZNF699Q32M78 642 aa21.76■■□□□ 1.07
SDHA-220ENST00000617470 C9orf57Q5W0N0 161 aa21.76■■□□□ 1.07
SDHA-220ENST00000617470 CC2D1AQ6P1N0 951 aaPredicted RBP21.76■■□□□ 1.07
SDHA-220ENST00000617470 TAF4BQ92750 862 aa21.76■■□□□ 1.07
SDHA-220ENST00000617470 CYFIP2Q96F07 1278 aa21.76■■□□□ 1.07
SDHA-220ENST00000617470 RBM12Q9NTZ6 932 aaKnown RBP21.76■■□□□ 1.07
SDHA-220ENST00000617470 AMFRQ9UKV5 643 aa21.76■■□□□ 1.07
SDHA-220ENST00000617470 PODXLO00592 558 aa21.75■■□□□ 1.07
SDHA-220ENST00000617470 PPEF2O14830 753 aa21.75■■□□□ 1.07
SDHA-220ENST00000617470 HTRA4P83105 476 aaPredicted RBP21.75■■□□□ 1.07
SDHA-220ENST00000617470 DSC1Q08554 894 aa21.75■■□□□ 1.07
SDHA-220ENST00000617470 COLGALT2Q8IYK4 626 aa21.75■■□□□ 1.07
SDHA-220ENST00000617470 CPA5Q8WXQ8 436 aa21.75■■□□□ 1.07
SDHA-220ENST00000617470 ZNF653Q96CK0 615 aa21.75■■□□□ 1.07
SDHA-220ENST00000617470 ZSWIM1Q9BR11 485 aa21.75■■□□□ 1.07
SDHA-220ENST00000617470 CISHQ9NSE2 258 aa21.75■■□□□ 1.07
SDHA-220ENST00000617470 POLIQ9UNA4 740 aa21.75■■□□□ 1.07
SDHA-220ENST00000617470 PRG3Q9Y2Y8 225 aaPredicted RBP21.75■■□□□ 1.07
SDHA-220ENST00000617470 CCDC151A5D8V7 595 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 WEE2P0C1S8 567 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 BMP8BP34820 402 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 PBX3P40426 434 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 BRD3Q15059 726 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 C11orf63Q6NUN7 778 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 FIBCD1Q8N539 461 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 PBKQ96KB5 322 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.74■■□□□ 1.07
SDHA-220ENST00000617470 ALG6Q9Y672 507 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 MRPL42Q9Y6G3 142 aaKnown RBP21.74■■□□□ 1.07
SDHA-220ENST00000617470 CD58P19256 250 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 LRPAP1P30533 357 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 SSTR3P32745 418 aaPredicted RBP21.74■■□□□ 1.07
SDHA-220ENST00000617470 CENPCQ03188 943 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 NAA35Q5VZE5 725 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 WDR93Q6P2C0 686 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 TDHQ8IZJ6 230 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 MCOLN2Q8IZK6 566 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 HASPINQ8TF76 798 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 DDX27Q96GQ7 796 aaKnown RBP21.74■■□□□ 1.07
SDHA-220ENST00000617470 CALR3Q96L12 384 aaKnown RBP21.74■■□□□ 1.07
SDHA-220ENST00000617470 UROC1Q96N76 676 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 NUP85Q9BW27 656 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 CWH43Q9H720 699 aa21.74■■□□□ 1.07
SDHA-220ENST00000617470 RANBP2P49792 3224 aaKnown RBP21.74■■□□□ 1.07
SDHA-220ENST00000617470 NT5C1B-RDH14C9J2C7 533 aa21.73■■□□□ 1.07
SDHA-220ENST00000617470 ALDH2P05091 517 aa21.73■■□□□ 1.07
SDHA-220ENST00000617470 MYOGP15173 224 aa21.73■■□□□ 1.07
SDHA-220ENST00000617470 RPL9P32969 192 aaKnown RBP21.73■■□□□ 1.07
SDHA-220ENST00000617470 RNASE9P60153 205 aaKnown RBP21.73■■□□□ 1.07
SDHA-220ENST00000617470 NOMO3P69849 1222 aa21.73■■□□□ 1.07
SDHA-220ENST00000617470 COL4A6Q14031 1691 aa21.73■■□□□ 1.07
SDHA-220ENST00000617470 UPP1Q16831 310 aa21.73■■□□□ 1.07
SDHA-220ENST00000617470 DCAF12L1Q5VU92 463 aa21.73■■□□□ 1.07
SDHA-220ENST00000617470 TMCO3Q6UWJ1 677 aa21.73■■□□□ 1.07
SDHA-220ENST00000617470 SCARA5Q6ZMJ2 495 aa21.73■■□□□ 1.07
SDHA-220ENST00000617470 ZNF606Q8WXB4 792 aa21.73■■□□□ 1.07
SDHA-220ENST00000617470 HPDLQ96IR7 371 aa21.73■■□□□ 1.07
SDHA-220ENST00000617470 LRRC1Q9BTT6 524 aa21.73■■□□□ 1.07
SDHA-220ENST00000617470 TMEM59LQ9UK28 342 aa21.73■■□□□ 1.07
SDHA-220ENST00000617470 LAMA2P24043 3122 aaKnown RBP21.73■■□□□ 1.07
SDHA-220ENST00000617470 TARSL2A2RTX5 802 aaKnown RBP21.72■■□□□ 1.07
SDHA-220ENST00000617470 LCHNA4D1U4 455 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 B3GAT3O94766 335 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 SLC11A1P49279 550 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 ALDH7A1P49419 539 aaKnown RBP21.72■■□□□ 1.07
SDHA-220ENST00000617470 BCAR1P56945 870 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 MYO1EQ12965 1108 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 MON1BQ7L1V2 547 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 CPNE8Q86YQ8 564 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 PASD1Q8IV76 773 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 ZNF564Q8TBZ8 553 aaPredicted RBP21.72■■□□□ 1.07
SDHA-220ENST00000617470 ACTRT1Q8TDG2 376 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 HDAC7Q8WUI4 952 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms