RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 BATF3Q9NR55 127 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 HOXC10Q9NYD6 342 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 FAM153AQ9UHL3 310 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 SIK3Q9Y2K2 1263 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 AATKQ6ZMQ8 1374 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 POLRMTO00411 1230 aaKnown RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 RTN2O75298 545 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 CPSF4O95639 269 aaKnown RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 PSMB9P28065 219 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 CDH18Q13634 790 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 EDRF1Q3B7T1 1238 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 ARMC3Q5W041 872 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 CYP4Z1Q86W10 505 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 CNPY4Q8N129 248 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 SIX5Q8N196 739 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 MMGT1Q8N4V1 131 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 FAM71DQ8N9W8 422 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 ENKURQ8TC29 256 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 RSPH9Q9H1X1 276 aaPredicted RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 TADA2AO75478 443 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 ZNF189O75820 626 aaPredicted RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 SOAT2O75908 522 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 EIF2B2P49770 351 aaKnown RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 CHRNB3Q05901 458 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 DENND6AQ8IWF6 608 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 CACTIN-AS1Q8N1I8 211 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 SPATA18Q8TC71 538 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 TRPC4APQ8TEL6 797 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 PIF1Q9H611 641 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 RNF112Q9ULX5 631 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 PADI4Q9UM07 663 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 CHKBQ9Y259 395 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 SH3GLB1Q9Y371 365 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 ZNF839A8K0R7 811 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 PSMC3P17980 439 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 LIFRP42702 1097 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 SERPINH1P50454 418 aaKnown RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 TMEM132DQ14C87 1099 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 DGKDQ16760 1214 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 ATP6AP1LQ52LC2 224 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 ZNF544Q6NX49 715 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 HAUS6Q7Z4H7 955 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 KRT73Q86Y46 540 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 BLOC1S5Q8TDH9 187 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 KCNB2Q92953 911 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 OTUD5Q96G74 571 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 MAGED4Q96JG8 741 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 RMND5AQ9H871 391 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 SLC25A13Q9UJS0 675 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 COL17A1Q9UMD9 1497 aaPredicted RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 SNX8Q9Y5X2 465 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 A0A087X0T9 212 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 PSTPIP1O43586 416 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 P4HBP07237 508 aaKnown RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 PCNAP12004 261 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 TAF8Q7Z7C8 310 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 LRRC49Q8IUZ0 686 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 STKLD1Q8NE28 680 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 MCRS1Q96EZ8 462 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 SH2D3AQ9BRG2 576 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 DAPK2Q9UIK4 370 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 ASAP1Q9ULH1 1129 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 NR5A2O00482 541 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 DYRK3O43781 588 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 H2AFYO75367 372 aaKnown RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 CCT3P49368 545 aaKnown RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 RHAGQ02094 409 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.24□□□□□ -1.41
RFX3-212ENST00000617270 TMEM62Q0P6H9 643 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 C1DQ13901 141 aaKnown RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 CBFBQ13951 182 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 C10orf120Q5SQS8 335 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 ENOSF1Q7L5Y1 443 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 SETD3Q86TU7 594 aaPredicted RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 OSBPL8Q9BZF1 889 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 KCTD10Q9H3F6 313 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 TRMT6Q9UJA5 497 aaKnown RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 COQ6Q9Y2Z9 468 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 CNOT3O75175 753 aaKnown RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 BBOX1O75936 387 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 BAIAP3O94812 1187 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 MFN2O95140 757 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 SNRPAP09012 282 aaKnown RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 ERVK-10P10266 1014 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 MTF1Q14872 753 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 PDK1Q15118 436 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 PDZK1Q5T2W1 519 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 SYDE1Q6ZW31 735 aaPredicted RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 TBC1D10CQ8IV04 446 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 IL17REQ8NFR9 667 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 TMEM47Q9BQJ4 181 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 TINF2Q9BSI4 451 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 RGS18Q9NS28 235 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 PPIEQ9UNP9 301 aaKnown RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 PVALEFA0A1B0GWK0 134 aa6.23□□□□□ -1.41
RFX3-212ENST00000617270 STX4Q12846 297 aa6.23□□□□□ -1.41
RFX3-212ENST00000617270 EIF2B5Q13144 721 aaKnown RBP6.23□□□□□ -1.41
RFX3-212ENST00000617270 CAMK2GQ13555 558 aaPredicted RBP6.23□□□□□ -1.41
RFX3-212ENST00000617270 PLCL1Q15111 1095 aa6.23□□□□□ -1.41
RFX3-212ENST00000617270 PFKFB3Q16875 520 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms