RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 SLC39A10Q9ULF5 831 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 TLR2O60603 784 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 CSF1RP07333 972 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 ATP4AP20648 1035 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 KRT72Q14CN4 511 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 FAM162AQ96A26 154 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 ZNF669Q96BR6 464 aaPredicted RBP19.63■□□□□ 0.73
SPAST-203ENST00000615843 BTBD7Q9P203 1132 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 ZNF212Q9UDV6 495 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 MOCS2O96007 188 aaPredicted RBP19.62■□□□□ 0.73
SPAST-203ENST00000615843 STILQ15468 1287 aa19.62■□□□□ 0.73
SPAST-203ENST00000615843 LPCAT2Q7L5N7 544 aa19.62■□□□□ 0.73
SPAST-203ENST00000615843 PATL1Q86TB9 770 aaKnown RBP19.62■□□□□ 0.73
SPAST-203ENST00000615843 SLC25A41Q8N5S1 370 aa19.62■□□□□ 0.73
SPAST-203ENST00000615843 KCTD17Q8N5Z5 321 aa19.62■□□□□ 0.73
SPAST-203ENST00000615843 ATP6V1E1P36543 226 aa19.62■□□□□ 0.73
SPAST-203ENST00000615843 CRELD2Q6UXH1 353 aaPredicted RBP19.62■□□□□ 0.73
SPAST-203ENST00000615843 ASAP3Q8TDY4 903 aa19.62■□□□□ 0.73
SPAST-203ENST00000615843 NDFIP2Q9NV92 336 aa19.62■□□□□ 0.73
SPAST-203ENST00000615843 DDX18Q9NVP1 670 aaKnown RBP19.62■□□□□ 0.73
SPAST-203ENST00000615843 SUGT1Q9Y2Z0 365 aa19.62■□□□□ 0.73
SPAST-203ENST00000615843 TULP4Q9NRJ4 1543 aa19.62■□□□□ 0.73
SPAST-203ENST00000615843 SLC37A4O43826 429 aa19.62■□□□□ 0.73
SPAST-203ENST00000615843 TAS2R42Q7RTR8 314 aa19.62■□□□□ 0.73
SPAST-203ENST00000615843 KIF12Q96FN5 646 aa19.62■□□□□ 0.73
SPAST-203ENST00000615843 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.62■□□□□ 0.73
SPAST-203ENST00000615843 DCDC2Q9UHG0 476 aa19.62■□□□□ 0.73
SPAST-203ENST00000615843 PCDHGB4Q9UN71 923 aa19.62■□□□□ 0.73
SPAST-203ENST00000615843 SRRM3A6NNA2 597 aaPredicted RBP19.62■□□□□ 0.73
SPAST-203ENST00000615843 GTF2H1P32780 548 aa19.62■□□□□ 0.73
SPAST-203ENST00000615843 C2CD2Q9Y426 696 aa19.62■□□□□ 0.73
SPAST-203ENST00000615843 APOA4P06727 396 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 TFE3P19532 575 aaPredicted RBP19.61■□□□□ 0.73
SPAST-203ENST00000615843 RASA1P20936 1047 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 HORMAD1Q86X24 394 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 P3H2Q8IVL5 708 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 SCN4BQ8IWT1 228 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 THEM5Q8N1Q8 247 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 DCPSQ96C86 337 aaKnown RBP19.61■□□□□ 0.73
SPAST-203ENST00000615843 APPL1Q9UKG1 709 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 GRAP2O75791 330 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 FAXCQ5TGI0 409 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 AGXT2Q9BYV1 514 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 RNPEPL1Q9HAU8 725 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 CYP39A1Q9NYL5 469 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 NFKBIAP25963 317 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 PPIDQ08752 370 aaKnown RBP19.61■□□□□ 0.73
SPAST-203ENST00000615843 GDPD5Q8WTR4 605 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 FRMD8P1Q9BZ68 369 aaPredicted RBP19.61■□□□□ 0.73
SPAST-203ENST00000615843 CBX6O95503 412 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 PRKCBP05771 671 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 GZMAP12544 262 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 SPHKAPQ2M3C7 1700 aa19.61■□□□□ 0.73
SPAST-203ENST00000615843 FCHO1O14526 889 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 RPL21P46778 160 aaKnown RBP19.6■□□□□ 0.73
SPAST-203ENST00000615843 SUPT20HL1Q3ZLR7 823 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 CD302Q8IX05 232 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 COL15A1P39059 1388 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 GPD1P21695 349 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 DNAAF5Q86Y56 855 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 CLEC10AQ8IUN9 316 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 ZNF184Q99676 751 aaPredicted RBP19.6■□□□□ 0.73
SPAST-203ENST00000615843 FLT1P17948 1338 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 USP31Q70CQ4 1352 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 PYGLP06737 847 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 CASP4P49662 377 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 TBL3Q12788 808 aaKnown RBP19.6■□□□□ 0.73
SPAST-203ENST00000615843 RNF149Q8NC42 400 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 WDR70Q9NW82 654 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 ZNF839A8K0R7 811 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 ITGB3BPQ13352 177 aaPredicted RBP19.6■□□□□ 0.73
SPAST-203ENST00000615843 PDK1Q15118 436 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 CCNG2Q16589 344 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 MEA1Q16626 185 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 C11orf63Q6NUN7 778 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 ILDR1Q86SU0 546 aaPredicted RBP19.6■□□□□ 0.73
SPAST-203ENST00000615843 SLC26A11Q86WA9 606 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 DEFB107AQ8IZN7 70 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 USP33Q8TEY7 942 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 TRIM54Q9BYV2 358 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 AGAP1Q9UPQ3 857 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 SETBP1Q9Y6X0 1596 aa19.6■□□□□ 0.73
SPAST-203ENST00000615843 PIK3CDO00329 1044 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 FKBP9O95302 570 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 ZNF23P17027 643 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 C16orf72Q14CZ0 275 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 TJAP1Q5JTD0 557 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 CYP4A22Q5TCH4 519 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 FKBP9P1Q75LS8 142 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 ZFRQ96KR1 1074 aaKnown RBP19.59■□□□□ 0.73
SPAST-203ENST00000615843 JMJD4Q9H9V9 463 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 FBXO40Q9UH90 709 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 AFF4Q9UHB7 1163 aaKnown RBP19.59■□□□□ 0.73
SPAST-203ENST00000615843 NTRK3Q16288 839 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 CENPTQ96BT3 561 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 C17orf80Q9BSJ5 609 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 JPH1Q9HDC5 661 aaPredicted RBP19.59■□□□□ 0.73
SPAST-203ENST00000615843 SYBUQ9NX95 663 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 PDE2AO00408 941 aaPredicted RBP19.59■□□□□ 0.73
SPAST-203ENST00000615843 TNFRSF8P28908 595 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms