RNA–Protein interactions for RNA: ENST00000615285.4

NCAM1-222, Transcript of neural cell adhesion molecule 1, human

TSL 5 BASIC

Gene NCAM1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAM1-222	ENST00000615285	CNTN2	Q02246	1040 aa		10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	ADCY1	Q08828	1119 aa		10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	PTK6	Q13882	451 aa		10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	LLGL1	Q15334	1064 aa		10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	HIF1A	Q16665	826 aa		10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	ACBD5	Q5T8D3	534 aa	Predicted RBP	10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	KRT82	Q9NSB4	513 aa		10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	SNX24	Q9Y343	169 aa		10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	PKP3	Q9Y446	797 aa		10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	CKM	P06732	381 aa		10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	GHR	P10912	638 aa		10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	BRD2	P25440	801 aa	Known RBP	10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	CRYBB1	P53674	252 aa	Predicted RBP	10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	RTP1	P59025	263 aa		10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	DDX42	Q86XP3	938 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	PDZD8	Q8NEN9	1154 aa		10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	ALKBH8	Q96BT7	664 aa	Known RBP	10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	GPRC5C	Q9NQ84	441 aa		10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	HPSE	Q9Y251	543 aa		10.02	□□□□□ -0.81
NCAM1-222	ENST00000615285	CNTNAP2	Q9UHC6	1331 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	SLITRK3	O94933	977 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	VCL	P18206	1134 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	PDIA2	Q13087	525 aa	Known RBP	10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	PDE1C	Q14123	709 aa	Predicted RBP	10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	CCNJL	Q8IV13	435 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	MAP4K3	Q8IVH8	894 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	RSPH1	Q8WYR4	309 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	SKA1	Q96BD8	255 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	PABPC5	Q96DU9	382 aa	Known RBP	10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	CYFIP2	Q96F07	1278 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	BRD8	Q9H0E9	1235 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	TRAF3IP3	Q9Y228	551 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	UBA6	A0AVT1	1052 aa	Predicted RBP	10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	LIG3	P49916	1009 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	SESN3	P58005	492 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	FMR1	Q06787	632 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	ARMC6	Q6NXE6	501 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	LRRC43	Q8N309	656 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	UBA3	Q8TBC4	463 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	AAR2	Q9Y312	384 aa	Known RBP	10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	CAPN7	Q9Y6W3	813 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	TTLL13P	A6NNM8	815 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	NDUFS3	O75489	264 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	RPL9	P32969	192 aa	Known RBP	10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	GLRA4	Q5JXX5	417 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	KCTD16	Q68DU8	428 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	TRIM65	Q6PJ69	517 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	MRPL17	Q9NRX2	175 aa	Known RBP	10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	TXLNG	Q9NUQ3	528 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	DDIT4	Q9NX09	232 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	SNTG2	Q9NY99	539 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	TTC36	A6NLP5	189 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	FAM86B1	E9PN63	330 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	MAF	O75444	373 aa	Predicted RBP	10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	FAM86B2	P0C5J1	330 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	STIP1	P31948	543 aa	Known RBP	10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	GRK4	P32298	578 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	SMARCB1	Q12824	385 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	ZSCAN26	Q16670	478 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	CCDC38	Q502W7	563 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	CES5A	Q6NT32	575 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	RASGRP2	Q7LDG7	609 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	CELF4	Q9BZC1	486 aa	Known RBP	10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	INTS13	Q9NVM9	706 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	ZFAT	Q9P243	1243 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	TNFSF13B	Q9Y275	285 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285		M0QYT0	321 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	SLC9A1	P19634	815 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	AKT1	P31749	480 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	STARD3	Q14849	445 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	ANKRD20A4	Q4UJ75	823 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	ANKRD20A8P	Q5CZ79	823 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	ANKRD20A2	Q5SQ80	823 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	TMTC4	Q5T4D3	741 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	ANKRD20A1	Q5TYW2	823 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	CBWD2	Q8IUF1	395 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	FIBCD1	Q8N539	461 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	TMEM117	Q9H0C3	514 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	DMAP1	Q9NPF5	467 aa	Predicted RBP	10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	DNAJC17	Q9NVM6	304 aa	Known RBP	10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	DDX43	Q9NXZ2	648 aa	Known RBP	10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	TAF6L	Q9Y6J9	622 aa		10.01	□□□□□ -0.81
NCAM1-222	ENST00000615285	TOPAZ1	Q8N9V7	1692 aa		10	□□□□□ -0.81
NCAM1-222	ENST00000615285	ACO1	P21399	889 aa	Known RBP	10	□□□□□ -0.81
NCAM1-222	ENST00000615285	DUSP28	Q4G0W2	176 aa		10	□□□□□ -0.81
NCAM1-222	ENST00000615285	UNC93A	Q86WB7	457 aa		10	□□□□□ -0.81
NCAM1-222	ENST00000615285	GBP7	Q8N8V2	638 aa	Predicted RBP	10	□□□□□ -0.81
NCAM1-222	ENST00000615285	C1orf131	Q8NDD1	294 aa	Known RBP	10	□□□□□ -0.81
NCAM1-222	ENST00000615285	ENGASE	Q8NFI3	743 aa		10	□□□□□ -0.81
NCAM1-222	ENST00000615285	TFB1M	Q8WVM0	346 aa	Known RBP	10	□□□□□ -0.81
NCAM1-222	ENST00000615285	CYTH2	Q99418	400 aa		10	□□□□□ -0.81
NCAM1-222	ENST00000615285	IL25	Q9H293	177 aa		10	□□□□□ -0.81
NCAM1-222	ENST00000615285	KDM4C	Q9H3R0	1056 aa		10	□□□□□ -0.81
NCAM1-222	ENST00000615285	EVA1B	Q9NVM1	165 aa		10	□□□□□ -0.81
NCAM1-222	ENST00000615285	PIK3R2	O00459	728 aa		10	□□□□□ -0.81
NCAM1-222	ENST00000615285	SYNCRIP	O60506	623 aa	Known RBP	10	□□□□□ -0.81
NCAM1-222	ENST00000615285	ACSL3	O95573	720 aa		10	□□□□□ -0.81
NCAM1-222	ENST00000615285	PTPN11	Q06124	597 aa	Predicted RBP	10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms