RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 FCARP24071 287 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 UBE2HP62256 183 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 RBP5P82980 135 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 ELAVL2Q12926 359 aaKnown RBP6.1□□□□□ -1.43
CPNE3-208ENST00000614678 TCERG1LQ5VWI1 586 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 PPFIBP1Q86W92 1011 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 SCN4BQ8IWT1 228 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 TCEAL8Q8IYN2 117 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 APPL2Q8NEU8 664 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 WHAMMQ8TF30 809 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 MYLPFQ96A32 169 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 CRACR2AQ9BSW2 395 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 PLEKHA4Q9H4M7 779 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 AFF4Q9UHB7 1163 aaKnown RBP6.1□□□□□ -1.43
CPNE3-208ENST00000614678 NUDT5Q9UKK9 219 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 ITGA11Q9UKX5 1188 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 CIZ1Q9ULV3 898 aaPredicted RBP6.1□□□□□ -1.43
CPNE3-208ENST00000614678 PIK3R2O00459 728 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 HUS1O60921 280 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 PHACTR2O75167 634 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 TNNC2P02585 160 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 CLDN10P78369 228 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 PSMD2Q13200 908 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 BMS1Q14692 1282 aaKnown RBP6.1□□□□□ -1.43
CPNE3-208ENST00000614678 LIMS2Q7Z4I7 341 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 C12orf56Q8IXR9 622 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 TDRD5Q8NAT2 981 aaKnown RBP6.1□□□□□ -1.43
CPNE3-208ENST00000614678 KIAA1468Q9P260 1216 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 DERAQ9Y315 318 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 MRPS23Q9Y3D9 190 aaKnown RBP6.1□□□□□ -1.43
CPNE3-208ENST00000614678 GON4LQ3T8J9 2241 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 F8VP50 259 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 LRG1P02750 347 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 ZXDAP98168 799 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 WDR44Q5JSH3 913 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 INTS6LQ5JSJ4 861 aaKnown RBP6.1□□□□□ -1.43
CPNE3-208ENST00000614678 TRIM68Q6AZZ1 485 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 CD302Q8IX05 232 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 WBP2Q969T9 261 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 SLC35C1Q96A29 364 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 GSDMAQ96QA5 445 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 B3GNT5Q9BYG0 378 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 FOXQ1Q9C009 403 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 GDAP2Q9NXN4 497 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 ARHGEF37A1IGU5 675 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 RNF225M0QZC1 329 aaPredicted RBP6.1□□□□□ -1.43
CPNE3-208ENST00000614678 GLULP15104 373 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 COL9A1P20849 921 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 GABRR2P28476 465 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 ELF1P32519 619 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 NDST1P52848 882 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 HTR4Q13639 388 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 ZNF699Q32M78 642 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 SV2CQ496J9 727 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 C11orf57Q6ZUT1 292 aaPredicted RBP6.1□□□□□ -1.43
CPNE3-208ENST00000614678 SLC9A9Q8IVB4 645 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 ZMIZ2Q8NF64 920 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 P2RY11Q96G91 374 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 RIPOR3Q96MK2 946 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 SYT15Q9BQS2 421 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 ZSWIM1Q9BR11 485 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 SRRTQ9BXP5 876 aaKnown RBP6.1□□□□□ -1.43
CPNE3-208ENST00000614678 DZANK1Q9NVP4 752 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 C2orf42Q9NWW7 574 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 ZDHHC7Q9NXF8 308 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 TMEM63CQ9P1W3 806 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 USP25Q9UHP3 1055 aa6.1□□□□□ -1.43
CPNE3-208ENST00000614678 DENND4CQ5VZ89 1909 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 TICRRQ7Z2Z1 1910 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 NPR3P17342 541 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 TYMPP19971 482 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 GNL1P36915 607 aaPredicted RBP6.09□□□□□ -1.43
CPNE3-208ENST00000614678 MESP2Q0VG99 397 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 TRPC3Q13507 836 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 STXBP4Q6ZWJ1 553 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 RRAGAQ7L523 313 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 ARHGEF19Q8IW93 802 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 SFTPA1Q8IWL2 248 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 MAB21L3Q8N8X9 362 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 SLC46A2Q9BY10 475 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 ELOVL4Q9GZR5 314 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 SLITRK6Q9H5Y7 841 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 SAMSN1Q9NSI8 373 aaKnown RBP6.09□□□□□ -1.43
CPNE3-208ENST00000614678 FAM86C1Q9NVL1 165 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 PRKAG3Q9UGI9 489 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 SPTBN4Q9H254 2564 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 A8MXQ7 604 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 CALUO43852 315 aaPredicted RBP6.09□□□□□ -1.43
CPNE3-208ENST00000614678 DCNP07585 359 aaKnown RBP6.09□□□□□ -1.43
CPNE3-208ENST00000614678 HAPLN1P10915 354 aaPredicted RBP6.09□□□□□ -1.43
CPNE3-208ENST00000614678 PIK3CAP42336 1068 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 MTHFRP42898 656 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 FAM171BQ6P995 826 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 FAM43BQ6ZT52 329 aaPredicted RBP6.09□□□□□ -1.43
CPNE3-208ENST00000614678 SIX5Q8N196 739 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 LRRC52Q8N7C0 313 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 FLCNQ8NFG4 579 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 ZSCAN18Q8TBC5 510 aaPredicted RBP6.09□□□□□ -1.43
CPNE3-208ENST00000614678 CACTINQ8WUQ7 758 aaKnown RBP6.09□□□□□ -1.43
CPNE3-208ENST00000614678 EDAQ92838 391 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms