RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 CBWD1Q9BRT8 395 aa9.13□□□□□ -0.95
PDE6A-204ENST00000613228 WDR37Q9Y2I8 494 aa9.13□□□□□ -0.95
PDE6A-204ENST00000613228 ALG6Q9Y672 507 aa9.13□□□□□ -0.95
PDE6A-204ENST00000613228 STRCP1A6NGW2 1772 aa9.13□□□□□ -0.95
PDE6A-204ENST00000613228 MAST2Q6P0Q8 1798 aa9.13□□□□□ -0.95
PDE6A-204ENST00000613228 DDX60Q8IY21 1712 aaKnown RBP9.13□□□□□ -0.95
PDE6A-204ENST00000613228 EIF4E1BA6NMX2 242 aaKnown RBP9.13□□□□□ -0.95
PDE6A-204ENST00000613228 POC1B-GALNT4F8VUJ3 575 aa9.13□□□□□ -0.95
PDE6A-204ENST00000613228 MTSS1O43312 755 aa9.13□□□□□ -0.95
PDE6A-204ENST00000613228 HOXA2O43364 376 aa9.13□□□□□ -0.95
PDE6A-204ENST00000613228 SPATA31C1P0DKV0 1188 aa9.13□□□□□ -0.95
PDE6A-204ENST00000613228 KRT4P19013 534 aa9.13□□□□□ -0.95
PDE6A-204ENST00000613228 COMTP21964 271 aa9.13□□□□□ -0.95
PDE6A-204ENST00000613228 TPD52P55327 224 aaPredicted RBP9.13□□□□□ -0.95
PDE6A-204ENST00000613228 BCAR1P56945 870 aa9.13□□□□□ -0.95
PDE6A-204ENST00000613228 RBM12BQ8IXT5 1001 aaKnown RBP9.13□□□□□ -0.95
PDE6A-204ENST00000613228 REM2Q8IYK8 340 aaPredicted RBP9.13□□□□□ -0.95
PDE6A-204ENST00000613228 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.13□□□□□ -0.95
PDE6A-204ENST00000613228 CXorf38Q8TB03 319 aa9.13□□□□□ -0.95
PDE6A-204ENST00000613228 NAF1Q96HR8 494 aaKnown RBP9.13□□□□□ -0.95
PDE6A-204ENST00000613228 SEC16BQ96JE7 1060 aa9.13□□□□□ -0.95
PDE6A-204ENST00000613228 EPAS1Q99814 870 aa9.13□□□□□ -0.95
PDE6A-204ENST00000613228 ELAC2Q9BQ52 826 aaKnown RBP9.13□□□□□ -0.95
PDE6A-204ENST00000613228 SYNJ2BP-COX16A0A087WUM0 186 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 SPDYE16A6NNV3 312 aaPredicted RBP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 MAFO75444 373 aaPredicted RBP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 CA4P22748 312 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 PBX1P40424 430 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 CASP4P49662 377 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 PDK2Q15119 407 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 MIIPQ5JXC2 388 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 IZUMO3Q5VZ72 239 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 HEATR6Q6AI08 1181 aaKnown RBP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 KSR1Q8IVT5 923 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 FBXO16Q8IX29 292 aaPredicted RBP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 KIAA2013Q8IYS2 634 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 NDUFAF2Q8N183 169 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 LRRC1Q9BTT6 524 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 TMEM117Q9H0C3 514 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 COX16Q9P0S2 106 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 ARHGAP20Q9P2F6 1191 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 PPP1R11O60927 126 aaPredicted RBP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 MMEP08473 750 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 ODC1P11926 461 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 ADORA2BP29275 332 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 GPAT2Q6NUI2 795 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 ZNF449Q6P9G9 518 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 LRRC71Q8N4P6 559 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 CPA5Q8WXQ8 436 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 ARHGEF26Q96DR7 871 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 MTG1Q9BT17 334 aaPredicted RBP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 MAGEB5Q9BZ81 275 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 DDX47Q9H0S4 455 aaKnown RBP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 KCTD10Q9H3F6 313 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 SCN7AQ01118 1682 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 ASTN1O14525 1302 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 M0R2N6 131 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 FOXN3O00409 490 aaPredicted RBP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 HNRNPCL1O60812 293 aaKnown RBP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 RTN3O95197 1032 aaPredicted RBP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 APOEP02649 317 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 STAG3L1P0CL83 205 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 SULT1E1P49888 294 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 ILF2Q12905 390 aaKnown RBP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 SPARCL1Q14515 664 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 LMBRD2Q68DH5 695 aaPredicted RBP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 FOXR1Q6PIV2 292 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 KDM7AQ6ZMT4 941 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 SH3BP5LQ7L8J4 393 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 AGGF1Q8N302 714 aaeCLIP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 NDEL1Q9GZM8 345 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 FGFR1OP2Q9NVK5 253 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 SLC45A1Q9Y2W3 748 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 NCANO14594 1321 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 ZC3H4Q9UPT8 1303 aaKnown RBP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 ABLIM1O14639 778 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 SERPINI2O75830 405 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 GUCY1A3Q02108 690 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 CDO1Q16878 200 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 GOLGA7BQ2TAP0 167 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 P3H1Q32P28 736 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 BOLA3Q53S33 107 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 BSPRYQ5W0U4 402 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 SPATA2LQ8IUW3 424 aaPredicted RBP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 RNF25Q96BH1 459 aaPredicted RBP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 GRAMD1AQ96CP6 724 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 DDX23Q9BUQ8 820 aaKnown RBP9.12□□□□□ -0.95
PDE6A-204ENST00000613228 GPRC5CQ9NQ84 441 aa9.12□□□□□ -0.95
PDE6A-204ENST00000613228 SPAG7O75391 227 aa9.11□□□□□ -0.95
PDE6A-204ENST00000613228 ARL1P40616 181 aaPredicted RBP9.11□□□□□ -0.95
PDE6A-204ENST00000613228 PPARDQ03181 441 aa9.11□□□□□ -0.95
PDE6A-204ENST00000613228 BYSLQ13895 437 aaKnown RBP9.11□□□□□ -0.95
PDE6A-204ENST00000613228 ACAP1Q15027 740 aa9.11□□□□□ -0.95
PDE6A-204ENST00000613228 GRIK4Q16099 956 aa9.11□□□□□ -0.95
PDE6A-204ENST00000613228 TAF2Q6P1X5 1199 aa9.11□□□□□ -0.95
PDE6A-204ENST00000613228 ZNF571Q7Z3V5 609 aaPredicted RBP9.11□□□□□ -0.95
PDE6A-204ENST00000613228 KCNK18Q7Z418 384 aa9.11□□□□□ -0.95
PDE6A-204ENST00000613228 NUP98P52948 1817 aa9.11□□□□□ -0.95
PDE6A-204ENST00000613228 CCT8L1PA6NM43 557 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms