RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 OR5B17Q8NGF7 314 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 ZNF518BQ9C0D4 1074 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 SMARCAD1Q9H4L7 1026 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 LRRC4Q9HBW1 653 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.11□□□□□ -0.95
LIG4-204ENST00000611712 ZC3H7BQ9UGR2 993 aaKnown RBP9.11□□□□□ -0.95
LIG4-204ENST00000611712 NUB1Q9Y5A7 615 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 ATP8B3O60423 1300 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 O00370 1275 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 TXNDC9O14530 226 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 APOL1O14791 398 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 ADCY3O60266 1144 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 GARSP41250 739 aaKnown RBP9.11□□□□□ -0.95
LIG4-204ENST00000611712 PEX5P50542 639 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 NOMO3P69849 1222 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 PKN2Q16513 984 aaKnown RBP9.11□□□□□ -0.95
LIG4-204ENST00000611712 ZDHHC24Q6UX98 284 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 LONP2Q86WA8 852 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 AGGF1Q8N302 714 aaeCLIP9.11□□□□□ -0.95
LIG4-204ENST00000611712 CRYGNQ8WXF5 182 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 TLCD1Q96CP7 247 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 PORCNQ9H237 461 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 CXorf56Q9H5V9 222 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 C10orf88Q9H8K7 445 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 ZDHHC18Q9NUE0 388 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 SNX9Q9Y5X1 595 aa9.11□□□□□ -0.95
LIG4-204ENST00000611712 RPTORQ8N122 1335 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 XPOTO43592 962 aaKnown RBP9.1□□□□□ -0.95
LIG4-204ENST00000611712 CSDE1O75534 798 aaKnown RBP9.1□□□□□ -0.95
LIG4-204ENST00000611712 ZWINTO95229 277 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 CCND1P24385 295 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 TMEM132DQ14C87 1099 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 FAXCQ5TGI0 409 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 HEATR6Q6AI08 1181 aaKnown RBP9.1□□□□□ -0.95
LIG4-204ENST00000611712 ACAP3Q96P50 834 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 OSBPL7Q9BZF2 842 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 ELP3Q9H9T3 547 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 PCDH9Q9HC56 1237 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 SAE1Q9UBE0 346 aaPredicted RBP9.1□□□□□ -0.95
LIG4-204ENST00000611712 HAO1Q9UJM8 370 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 ZNF862O60290 1169 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 ATP6V1G2O95670 118 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 ADORA2BP29275 332 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 SSTR1P30872 391 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 RBP5P82980 135 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 IFRD2Q12894 506 aaPredicted RBP9.1□□□□□ -0.95
LIG4-204ENST00000611712 KCNV1Q6PIU1 500 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 BRSK2Q8IWQ3 736 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 ZCCHC9Q8N567 271 aaKnown RBP9.1□□□□□ -0.95
LIG4-204ENST00000611712 NSMCE1Q8WV22 266 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 CKAP2Q8WWK9 683 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 RXFP1Q9HBX9 757 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 FAM49BQ9NUQ9 324 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 CYP39A1Q9NYL5 469 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 LOC102724159A0A0B4J2E5 919 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 CCDC160A6NGH7 325 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 A8MXQ7 604 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 FOXO6A8MYZ6 492 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 IL18RAPO95256 599 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 LAMTOR4Q0VGL1 99 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 PWP2Q15269 919 aaKnown RBP9.1□□□□□ -0.95
LIG4-204ENST00000611712 MPZL3Q6UWV2 235 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 WDR75Q8IWA0 830 aaKnown RBP9.1□□□□□ -0.95
LIG4-204ENST00000611712 RNF169Q8NCN4 708 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 PLEKHO2Q8TD55 490 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 HPDLQ96IR7 371 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 PAFAH2Q99487 392 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 SHOC2Q9UQ13 582 aa9.1□□□□□ -0.95
LIG4-204ENST00000611712 H0YGN5 161 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 DHX15O43143 795 aaKnown RBP9.09□□□□□ -0.95
LIG4-204ENST00000611712 DNAJC8O75937 253 aaPredicted RBP9.09□□□□□ -0.95
LIG4-204ENST00000611712 PGK2P07205 417 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 PTPRAP18433 802 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 GPD1P21695 349 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 ERFP50548 548 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 CDH8P55286 799 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 Q3C1V9 767 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 FAM47CQ5HY64 1035 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 RFX8Q6ZV50 586 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 SCYL1Q96KG9 808 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 FHDC1Q9C0D6 1143 aaPredicted RBP9.09□□□□□ -0.95
LIG4-204ENST00000611712 MANSC1Q9H8J5 431 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 STOML1Q9UBI4 398 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 NFS1Q9Y697 457 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 DNM1LO00429 736 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 CXCL8P10145 99 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 STIP1P31948 543 aaKnown RBP9.09□□□□□ -0.95
LIG4-204ENST00000611712 OAZ1P54368 228 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 ELF3P78545 371 aaPredicted RBP9.09□□□□□ -0.95
LIG4-204ENST00000611712 LY6KQ17RY6 165 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 BZW1Q7L1Q6 419 aaKnown RBP9.09□□□□□ -0.95
LIG4-204ENST00000611712 CDKL3Q8IVW4 592 aaPredicted RBP9.09□□□□□ -0.95
LIG4-204ENST00000611712 SIX6OS1Q8N1H7 587 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 TTC39CQ8N584 583 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 FAM111AQ96PZ2 611 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 NT5C1AQ9BXI3 368 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 PRMT7Q9NVM4 692 aaPredicted RBP9.09□□□□□ -0.95
LIG4-204ENST00000611712 PAK5Q9P286 719 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 MARCOQ9UEW3 520 aaPredicted RBP9.09□□□□□ -0.95
LIG4-204ENST00000611712 SLC24A2Q9UI40 661 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms