RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 MAGEA10P43363 369 aaPredicted RBP23.64■■□□□ 1.37
UBE3C-209ENST00000611269 ASPAP45381 313 aa23.64■■□□□ 1.37
UBE3C-209ENST00000611269 PDE6CP51160 858 aa23.64■■□□□ 1.37
UBE3C-209ENST00000611269 LILRA4P59901 499 aa23.64■■□□□ 1.37
UBE3C-209ENST00000611269 SCARA5Q6ZMJ2 495 aa23.64■■□□□ 1.37
UBE3C-209ENST00000611269 DAAM2Q86T65 1068 aa23.64■■□□□ 1.37
UBE3C-209ENST00000611269 KRT222Q8N1A0 295 aa23.64■■□□□ 1.37
UBE3C-209ENST00000611269 LRRC43Q8N309 656 aa23.64■■□□□ 1.37
UBE3C-209ENST00000611269 DDX1Q92499 740 aaKnown RBP23.64■■□□□ 1.37
UBE3C-209ENST00000611269 DDX27Q96GQ7 796 aaKnown RBP23.64■■□□□ 1.37
UBE3C-209ENST00000611269 UROC1Q96N76 676 aa23.64■■□□□ 1.37
UBE3C-209ENST00000611269 NRDE2Q9H7Z3 1164 aa23.64■■□□□ 1.37
UBE3C-209ENST00000611269 BUB1BO60566 1050 aaPredicted RBP23.63■■□□□ 1.37
UBE3C-209ENST00000611269 TAF6P49848 677 aa23.63■■□□□ 1.37
UBE3C-209ENST00000611269 GLE1Q53GS7 698 aaKnown RBP23.63■■□□□ 1.37
UBE3C-209ENST00000611269 ZNF689Q96CS4 500 aaPredicted RBP23.63■■□□□ 1.37
UBE3C-209ENST00000611269 HES6Q96HZ4 224 aa23.63■■□□□ 1.37
UBE3C-209ENST00000611269 RC3H2Q9HBD1 1191 aaKnown RBP23.63■■□□□ 1.37
UBE3C-209ENST00000611269 EHD2Q9NZN4 543 aa23.63■■□□□ 1.37
UBE3C-209ENST00000611269 L1RE1Q9UN81 338 aa23.63■■□□□ 1.37
UBE3C-209ENST00000611269 KCNK3O14649 394 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 MMEP08473 750 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 TBXAS1P24557 533 aaPredicted RBP23.62■■□□□ 1.37
UBE3C-209ENST00000611269 TAF3Q5VWG9 929 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 UBE2Q2Q8WVN8 375 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 SELENOOQ9BVL4 669 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 GOLPH3Q9H4A6 298 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 SMARCAL1Q9NZC9 954 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 AMFRQ9UKV5 643 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 SNX9Q9Y5X1 595 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 KPNA7A9QM74 516 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 B3GAT3O94766 335 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 BPIFB4P59827 614 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 TNNC1P63316 161 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 CBX1P83916 185 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 SV2CQ496J9 727 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 ACTRT1Q8TDG2 376 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 SMYD3Q9H7B4 428 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 ACP6Q9NPH0 428 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 SLC4A7Q9Y6M7 1214 aa23.62■■□□□ 1.37
UBE3C-209ENST00000611269 F8W810 466 aa23.61■■□□□ 1.37
UBE3C-209ENST00000611269 MAP2K7O14733 419 aa23.61■■□□□ 1.37
UBE3C-209ENST00000611269 SASH3O75995 380 aa23.61■■□□□ 1.37
UBE3C-209ENST00000611269 MTA2O94776 668 aa23.61■■□□□ 1.37
UBE3C-209ENST00000611269 WEE2P0C1S8 567 aa23.61■■□□□ 1.37
UBE3C-209ENST00000611269 P4HA1P13674 534 aa23.61■■□□□ 1.37
UBE3C-209ENST00000611269 OR1G1P47890 313 aa23.61■■□□□ 1.37
UBE3C-209ENST00000611269 ZNF677Q86XU0 584 aa23.61■■□□□ 1.37
UBE3C-209ENST00000611269 HASPINQ8TF76 798 aa23.61■■□□□ 1.37
UBE3C-209ENST00000611269 LRRC1Q9BTT6 524 aa23.61■■□□□ 1.37
UBE3C-209ENST00000611269 BCO2Q9BYV7 579 aa23.61■■□□□ 1.37
UBE3C-209ENST00000611269 RBM12Q9NTZ6 932 aaKnown RBP23.61■■□□□ 1.37
UBE3C-209ENST00000611269 COG5Q9UP83 839 aa23.61■■□□□ 1.37
UBE3C-209ENST00000611269 GJB5O95377 273 aa23.6■■□□□ 1.37
UBE3C-209ENST00000611269 RAP1GAPP47736 663 aa23.6■■□□□ 1.37
UBE3C-209ENST00000611269 FAXDC2Q96IV6 333 aa23.6■■□□□ 1.37
UBE3C-209ENST00000611269 YME1L1Q96TA2 773 aa23.6■■□□□ 1.37
UBE3C-209ENST00000611269 PRG3Q9Y2Y8 225 aaPredicted RBP23.6■■□□□ 1.37
UBE3C-209ENST00000611269 ITGB1P05556 798 aa23.6■■□□□ 1.37
UBE3C-209ENST00000611269 KRT5P13647 590 aa23.6■■□□□ 1.37
UBE3C-209ENST00000611269 ACO1P21399 889 aaKnown RBP23.6■■□□□ 1.37
UBE3C-209ENST00000611269 DNA2P51530 1060 aa23.6■■□□□ 1.37
UBE3C-209ENST00000611269 CDH8P55286 799 aa23.6■■□□□ 1.37
UBE3C-209ENST00000611269 SMYD5Q6GMV2 418 aa23.6■■□□□ 1.37
UBE3C-209ENST00000611269 DCLRE1AQ6PJP8 1040 aa23.6■■□□□ 1.37
UBE3C-209ENST00000611269 CD300LGQ6UXG3 332 aa23.6■■□□□ 1.37
UBE3C-209ENST00000611269 CCNI2Q6ZMN8 369 aaPredicted RBP23.6■■□□□ 1.37
UBE3C-209ENST00000611269 HDXQ7Z353 690 aa23.6■■□□□ 1.37
UBE3C-209ENST00000611269 SDCBP2Q9H190 292 aa23.6■■□□□ 1.37
UBE3C-209ENST00000611269 MTIF3Q9H2K0 278 aaKnown RBP23.6■■□□□ 1.37
UBE3C-209ENST00000611269 GDAP2Q9NXN4 497 aa23.6■■□□□ 1.37
UBE3C-209ENST00000611269 TMEM59LQ9UK28 342 aa23.6■■□□□ 1.37
UBE3C-209ENST00000611269 CNTN6Q9UQ52 1028 aa23.6■■□□□ 1.37
UBE3C-209ENST00000611269 CD58P19256 250 aa23.59■■□□□ 1.37
UBE3C-209ENST00000611269 PLA2G4AP47712 749 aa23.59■■□□□ 1.37
UBE3C-209ENST00000611269 BTG3Q14201 252 aaPredicted RBP23.59■■□□□ 1.37
UBE3C-209ENST00000611269 MAP9Q49MG5 647 aa23.59■■□□□ 1.37
UBE3C-209ENST00000611269 C9orf50Q5SZB4 431 aa23.59■■□□□ 1.37
UBE3C-209ENST00000611269 ACAD10Q6JQN1 1059 aa23.59■■□□□ 1.37
UBE3C-209ENST00000611269 RASGEF1CQ8N431 466 aa23.59■■□□□ 1.37
UBE3C-209ENST00000611269 SLC9A7Q96T83 725 aa23.59■■□□□ 1.37
UBE3C-209ENST00000611269 TNRC18O15417 2968 aaPredicted RBP23.59■■□□□ 1.37
UBE3C-209ENST00000611269 CYP1A2P05177 515 aa23.58■■□□□ 1.37
UBE3C-209ENST00000611269 ATP2A2P16615 1042 aaKnown RBP23.58■■□□□ 1.37
UBE3C-209ENST00000611269 PBX3P40426 434 aa23.58■■□□□ 1.37
UBE3C-209ENST00000611269 SLC11A1P49279 550 aa23.58■■□□□ 1.37
UBE3C-209ENST00000611269 RASIP1Q5U651 963 aa23.58■■□□□ 1.37
UBE3C-209ENST00000611269 C11orf63Q6NUN7 778 aa23.58■■□□□ 1.37
UBE3C-209ENST00000611269 CMTR2Q8IYT2 770 aaKnown RBP23.58■■□□□ 1.37
UBE3C-209ENST00000611269 ZBED2Q9BTP6 218 aa23.58■■□□□ 1.37
UBE3C-209ENST00000611269 CWH43Q9H720 699 aa23.58■■□□□ 1.37
UBE3C-209ENST00000611269 CISHQ9NSE2 258 aa23.58■■□□□ 1.37
UBE3C-209ENST00000611269 CTTNBP2NLQ9P2B4 639 aa23.58■■□□□ 1.37
UBE3C-209ENST00000611269 RANBP2P49792 3224 aaKnown RBP23.58■■□□□ 1.36
UBE3C-209ENST00000611269 NRP1O14786 923 aa23.58■■□□□ 1.36
UBE3C-209ENST00000611269 ALDH2P05091 517 aa23.58■■□□□ 1.36
UBE3C-209ENST00000611269 AARSP49588 968 aaKnown RBP eCLIP23.58■■□□□ 1.36
UBE3C-209ENST00000611269 CLEC16AQ2KHT3 1053 aa23.58■■□□□ 1.36
UBE3C-209ENST00000611269 SOWAHAQ2M3V2 549 aa23.58■■□□□ 1.36
UBE3C-209ENST00000611269 TIGD5Q53EQ6 642 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms