RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CAND2O75155 1236 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 PSMA2P25787 234 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 IVDP26440 423 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 MDH1P40925 334 aaKnown RBP14.38□□□□□ -0.11
NEK3-205ENST00000610828 LRRC38Q5VT99 294 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 GSTA5Q7RTV2 222 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 JOSD2Q8TAC2 188 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 CYP3A43Q9HB55 503 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 SLC5A4Q9NY91 659 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 TLDC2A0PJX2 215 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 SLC15A5A6NIM6 579 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 SIGLEC16A6NMB1 481 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 MICAL2O94851 1124 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 TJP3O95049 919 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 NPTXRO95502 500 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 LSP1P33241 339 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 ITGA8P53708 1063 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 RBP5P82980 135 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 SMYD5Q6GMV2 418 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 NIPA2Q8N8Q9 360 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 RAPGEF5Q92565 580 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 LRRD1A4D1F6 860 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 RRN3P2A6NIE6 340 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 ERBB2P04626 1255 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 GRM5P41594 1212 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 SPOCD1Q6ZMY3 1216 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 CATSPER4Q7RTX7 472 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 XYLT1Q86Y38 959 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 EMC1Q8N766 993 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 METTL5Q9NRN9 209 aaKnown RBP14.37□□□□□ -0.11
NEK3-205ENST00000610828 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.37□□□□□ -0.11
NEK3-205ENST00000610828 SMIM10L2AP0DMW4 78 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 SMIM10L2BP0DMW5 78 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 CHKAP35790 457 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 NDST1P52848 882 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 PPP2R2AP63151 447 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 SMTNL2Q2TAL5 461 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 DCAF4L1Q3SXM0 396 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 CCDC89Q8N998 374 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 LENG1Q96BZ8 264 aaPredicted RBP14.37□□□□□ -0.11
NEK3-205ENST00000610828 OSMRQ99650 979 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 TRAIPQ9BWF2 469 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 GCOM2Q9BZD3 368 aaPredicted RBP14.37□□□□□ -0.11
NEK3-205ENST00000610828 CXCL16Q9H2A7 254 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 CDC42EP4Q9H3Q1 356 aaKnown RBP14.37□□□□□ -0.11
NEK3-205ENST00000610828 ZWILCHQ9H900 591 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 AAASQ9NRG9 546 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 DNAJC17Q9NVM6 304 aaKnown RBP14.37□□□□□ -0.11
NEK3-205ENST00000610828 DDX56Q9NY93 547 aaKnown RBP14.37□□□□□ -0.11
NEK3-205ENST00000610828 SNTG2Q9NY99 539 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 ANAPC5Q9UJX4 755 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 DNPEPQ9ULA0 475 aa14.37□□□□□ -0.11
NEK3-205ENST00000610828 BARX2Q9UMQ3 279 aaPredicted RBP14.37□□□□□ -0.11
NEK3-205ENST00000610828 VDRP11473 427 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 HOXA11P31270 313 aaPredicted RBP14.36□□□□□ -0.11
NEK3-205ENST00000610828 CCT5P48643 541 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 BYSLQ13895 437 aaKnown RBP14.36□□□□□ -0.11
NEK3-205ENST00000610828 TFDP3Q5H9I0 405 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 KCNT1Q5JUK3 1230 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 RHBDF2Q6PJF5 856 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 PRUNE1Q86TP1 453 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 NT5DC4Q86YG4 428 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 UBA3Q8TBC4 463 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 HAUS1Q96CS2 278 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 ADAMTS10Q9H324 1103 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 RRAGCQ9HB90 399 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 CDHR5Q9HBB8 845 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 WDR35Q9P2L0 1181 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 NEU2Q9Y3R4 380 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 HES2Q9Y543 173 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 NRCAMQ92823 1304 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 A6NJR5 290 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 LIASO43766 372 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 LRCH4O75427 683 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 ACSL3O95573 720 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 ITGBL1O95965 494 aaPredicted RBP14.36□□□□□ -0.11
NEK3-205ENST00000610828 HMGCRP04035 888 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 GPD2P43304 727 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 SLCO1A2P46721 670 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 COPS2P61201 443 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 IRX5P78411 483 aaPredicted RBP14.36□□□□□ -0.11
NEK3-205ENST00000610828 MYO1EQ12965 1108 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 CNGA2Q16280 664 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 SLC27A1Q6PCB7 646 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 DDX23Q9BUQ8 820 aaKnown RBP14.36□□□□□ -0.11
NEK3-205ENST00000610828 SLC12A6Q9UHW9 1150 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 ZNF148Q9UQR1 794 aa14.36□□□□□ -0.11
NEK3-205ENST00000610828 DOCK3Q8IZD9 2030 aa14.35□□□□□ -0.11
NEK3-205ENST00000610828 TRIP11Q15643 1979 aa14.35□□□□□ -0.11
NEK3-205ENST00000610828 hCG_1818297A0A087WSY0 165 aa14.35□□□□□ -0.11
NEK3-205ENST00000610828 NDUFAB1O14561 156 aa14.35□□□□□ -0.11
NEK3-205ENST00000610828 RGS16O15492 202 aaPredicted RBP14.35□□□□□ -0.11
NEK3-205ENST00000610828 GPR32O75388 356 aa14.35□□□□□ -0.11
NEK3-205ENST00000610828 F2P00734 622 aa14.35□□□□□ -0.11
NEK3-205ENST00000610828 CDKN2BP42772 138 aa14.35□□□□□ -0.11
NEK3-205ENST00000610828 SLC25A11Q02978 314 aaKnown RBP14.35□□□□□ -0.11
NEK3-205ENST00000610828 CAV1Q03135 178 aa14.35□□□□□ -0.11
NEK3-205ENST00000610828 LMNB2Q03252 620 aa14.35□□□□□ -0.11
NEK3-205ENST00000610828 INCA1Q0VD86 236 aa14.35□□□□□ -0.11
NEK3-205ENST00000610828 ZNF268Q14587 947 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms